Gene: AT3G49080

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G49080
  • Transcript Identifier AT3G49080.1
  • Gene Type Coding gene
  • Location Chr3 : 18194500-18196657 : negative

Gene Family Information

  • ID HOM05D006237
  • #Genes/#Species 127/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G49080.1
  • uniprot Q8L6Z4

Descriptions

  • Description Ribosomal protein S5 domain 2-like superfamily protein
  • Computational description Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S9 (InterPro:IPR000754), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S9, conserved site (InterPro:IPR020574), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: ribosomal protein S9 (TAIR:AT1G74970.1); Has 8295 Blast hits to 8282 proteins in 2846 species: Archae - 200; Bacteria - 5387; Metazoa - 167; Fungi - 129; Plants - 162; Viruses - 18; Other Eukaryotes - 2232 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation
GO:0048229
IMP
Gene Ontologygametophyte development1
GO:0009559
IMP
Gene Ontologyembryo sac central cell differentiation1
GO:0009555
IMP
Gene Ontologypollen development1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
Gene Ontologystructural constituent of ribosome2
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003723
IBA
Gene OntologyRNA binding2
GO:0005515
IPI
Gene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015935
IBA
Gene Ontologysmall ribosomal subunit2
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005739
IDA
ISM
Gene Ontologymitochondrion1
GO:0005763
IBA
Gene Ontologymitochondrial small ribosomal subunit2
GO:0005829
HDA
Gene Ontologycytosol3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000754 Ribosomal protein S9
IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
IPR020568 Ribosomal protein S5 domain 2-type fold
Mapman id Description
17.7.1.2.7 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS9