Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p57690 Brassica napus HOM05D005442 ORTHO05D013811 1.3e-109 399.8 207 100.0
BolC3t18042H Brassica oleracea HOM05D005442 ORTHO05D013811 3.4e-99 365.2 210 91.4
C03p57670 Brassica napus HOM05D005442 ORTHO05D006450 1.6e-88 329.7 187 90.4
BolC3t18043H Brassica oleracea HOM05D008551 ORTHO05D006450 8.2e-77 290.8 148 98.0
BcaC01g02969 Brassica carinata HOM05D005442 ORTHO05D006450 2.9e-42 176.0 106 86.8
Sp3g30220 Schrenkiella parvula HOM05D005442 ORTHO05D006450 8.6e-42 174.5 112 82.1
A07p04140 Brassica napus HOM05D005442 ORTHO05D006450 3.6e-40 169.1 122 74.6
BraA07t28205Z Brassica rapa HOM05D005442 ORTHO05D006450 3.6e-40 169.1 122 74.6
BcaC06g36199 Brassica carinata HOM05D005442 ORTHO05D006450 4.7e-40 168.7 122 75.4
C07p06570 Brassica napus HOM05D005442 ORTHO05D006450 4.7e-40 168.7 122 75.4
BolC7t41079H Brassica oleracea HOM05D005442 ORTHO05D006450 4.7e-40 168.7 122 75.4
BcaB03g16428 Brassica carinata HOM05D005442 ORTHO05D006450 8.0e-40 167.9 122 74.6
Thhalv10022629m.g Eutrema salsugineum HOM05D005442 ORTHO05D006450 1.3e-37 160.6 109 77.1
C09p58850 Brassica napus HOM05D008551 ORTHO05D033369 1.1e-36 157.5 82 93.9
BraA03t13743Z Brassica rapa HOM05D008551 ORTHO05D033369 1.1e-36 157.5 82 92.7
BolC9t58729H Brassica oleracea HOM05D008551 ORTHO05D033369 1.9e-36 156.8 82 93.9
Carub.0001s3251 Capsella rubella HOM05D005442 ORTHO05D006450 9.5e-33 144.4 115 70.4
CARHR033820 Cardamine hirsuta HOM05D005442 ORTHO05D006450 3.6e-32 142.5 112 70.5
AL1G48920 Arabidopsis lyrata HOM05D005442 ORTHO05D006450 3.1e-31 139.4 115 67.0
AT1G34360 Arabidopsis thaliana HOM05D005442 ORTHO05D006450 8.9e-31 137.9 115 66.1
BcaC01g02968 Brassica carinata HOM05D005442 ORTHO05D006450 8.9e-31 137.9 113 66.4
Aa31LG8G14120 Aethionema arabicum HOM05D005442 ORTHO05D006450 2.2e-29 133.3 112 62.5
THA.LOC104807379 Tarenaya hassleriana HOM05D005442 ORTHO05D006450 3.3e-25 119.4 109 55.0
BolC3t18040H Brassica oleracea HOM05D008551 ORTHO05D041561 6.8e-23 111.7 70 80.0
C04p62510 Brassica napus HOM05D008551 ORTHO05D017677 1.7e-21 107.1 86 65.1
BolC4t27731H Brassica oleracea HOM05D008551 ORTHO05D017677 8.3e-21 104.8 84 64.3
Dinv41924 Davidia involucrata HOM05D005442 ORTHO05D006450 5.4e-20 102.1 115 50.4
A04p25400 Brassica napus HOM05D008551 ORTHO05D017677 7.1e-20 101.7 86 64.0
BraA04t18043Z Brassica rapa HOM05D008551 ORTHO05D017677 7.1e-20 101.7 86 64.0
C03p57660 Brassica napus HOM05D008551 ORTHO05D041561 9.2e-20 101.3 70 77.1
Psat6g232320 Pisum sativum HOM05D005442 ORTHO05D006450 9.2e-20 101.3 123 45.5
Cc09_g09800 Coffea canephora HOM05D005442 ORTHO05D006450 1.6e-19 100.5 115 47.8
vmacro17319 Vaccinium macrocarpon HOM05D005442 ORTHO05D006450 2.1e-19 100.1 115 49.6
Actinidia21468 Actinidia chinensis HOM05D005442 ORTHO05D006450 6.0e-19 98.6 115 49.6
Actinidia39159 Actinidia chinensis HOM05D005442 ORTHO05D006450 6.0e-19 98.6 115 49.6
Sc08g0002780 Simmondsia chinensis HOM05D005442 ORTHO05D006450 7.8e-19 98.2 111 45.9
Ca_03302_v3 Cicer arietinum L. HOM05D005442 ORTHO05D006450 1.0e-18 97.8 114 47.4
MBI11_g07617_MAGBIO Magnolia biondii HOM05D005442 ORTHO05D006450 1.3e-18 97.4 128 47.7
CDE04G0468 Ceratophyllum demersum HOM05D005442 ORTHO05D000996 1.7e-18 97.1 109 49.5
Sed0001500 Sechium edule HOM05D005442 ORTHO05D006450 3.9e-18 95.9 111 49.5
A07p30120 Brassica napus HOM05D008551 ORTHO05D013811 5.1e-18 95.5 79 68.4
CDE02G3112 Ceratophyllum demersum HOM05D005442 ORTHO05D006450 8.6e-18 94.7 109 49.5
Nn1g06499 Nelumbo nucifera HOM05D005442 ORTHO05D006450 8.6e-18 94.7 110 50.0
DCAR_011887 Daucus carota HOM05D005442 ORTHO05D006450 1.5e-17 94.0 110 49.1
TAR376G0424 Trochodendron aralioides HOM05D005442 ORTHO05D006450 1.5e-17 94.0 115 47.0
MSTRG.16924 Avicennia marina HOM05D005442 ORTHO05D006450 1.9e-17 93.6 113 45.1
CsaV3_2G016200 Cucumis sativus L. HOM05D005442 ORTHO05D006450 2.5e-17 93.2 109 46.8
Lj5g0013939 Lotus japonicus HOM05D005442 ORTHO05D006450 2.5e-17 93.2 124 44.4
Atru.chr5.3384 Acer truncatum HOM05D005442 ORTHO05D006450 3.3e-17 92.8 110 47.3
A04p05180 Brassica napus HOM05D008551 ORTHO05D017677 3.3e-17 92.8 86 60.5
C03p62250 Brassica napus HOM05D008551 ORTHO05D013811 3.3e-17 92.8 79 68.4
C03p62260 Brassica napus HOM05D008551 ORTHO05D013811 3.3e-17 92.8 79 68.4
BolC3t18487H Brassica oleracea HOM05D008551 ORTHO05D013811 3.3e-17 92.8 79 68.4
Actinidia32035 Actinidia chinensis HOM05D005442 ORTHO05D006450 4.3e-17 92.4 115 47.8
TAR369G0572 Trochodendron aralioides HOM05D005442 ORTHO05D006450 4.3e-17 92.4 115 47.0
C04p37920 Brassica napus HOM05D008551 ORTHO05D017677 5.6e-17 92.0 86 59.3
BolC4t25366H Brassica oleracea HOM05D008551 ORTHO05D017677 5.6e-17 92.0 86 59.3
EL10Ac9g21351 Beta vulgaris HOM05D005442 ORTHO05D006450 9.5e-17 91.3 110 49.1
BolC3t18490H Brassica oleracea HOM05D008551 ORTHO05D013811 1.6e-16 90.5 79 67.1
Ciclev10028168m.g Citrus clementina HOM05D005442 ORTHO05D006450 1.6e-16 90.5 114 43.9
MELO3C020828.2 Cucumis melo HOM05D005442 ORTHO05D006450 1.6e-16 90.5 109 45.9
A08p05720 Brassica napus HOM05D008551 ORTHO05D017677 2.8e-16 89.7 86 59.3
BraA08t32576Z Brassica rapa HOM05D008551 ORTHO05D017677 2.8e-16 89.7 86 59.3
CSS0044298 Camellia sinensis var. sinensis HOM05D005442 ORTHO05D006450 3.6e-16 89.4 115 44.3
Eucgr.I01451 Eucalyptus grandis HOM05D005442 ORTHO05D006450 3.6e-16 89.4 114 41.2
Lalb_Chr06g0163701 Lupinus albus HOM05D005442 ORTHO05D006450 3.6e-16 89.4 128 43.0
BolC3t18488H Brassica oleracea HOM05D008551 ORTHO05D013811 4.7e-16 89.0 79 65.8
Sabra09G0106500 Salix brachista HOM05D005442 ORTHO05D006450 4.7e-16 89.0 114 43.0
GSVIVG01023996001 Vitis vinifera HOM05D005442 ORTHO05D006450 4.7e-16 89.0 114 42.1
Lj5A177G53 Lonicera japonica HOM05D005442 ORTHO05D006450 6.2e-16 88.6 128 45.3
Medtr1g112820 Medicago truncatula HOM05D005442 ORTHO05D002291 6.2e-16 88.6 111 45.0
AUR62013010 Chenopodium quinoa HOM05D005442 ORTHO05D006450 8.1e-16 88.2 114 47.4
Peaxi162Scf00362g00530 Petunia axillaris HOM05D005442 ORTHO05D006450 1.4e-15 87.4 127 44.1
Thecc.02G056900 Theobroma cacao HOM05D005442 ORTHO05D006450 1.4e-15 87.4 119 43.7
Manes.01G140900 Manihot esculenta HOM05D005442 ORTHO05D006450 2.4e-15 86.7 114 42.1
Oeu015514.1 Olea europaea HOM05D005442 ORTHO05D006450 2.4e-15 86.7 88 48.9
ClCG02G012030 Citrullus lanatus HOM05D005442 ORTHO05D006450 5.2e-15 85.5 110 46.4
C03p62270 Brassica napus HOM05D008551 ORTHO05D013811 6.8e-15 85.1 69 71.0
TPR.G2470 Trifolium pratense HOM05D005442 ORTHO05D006450 6.8e-15 85.1 102 50.0
CiPaw.05G084400 Carya illinoinensis HOM05D005442 ORTHO05D006450 8.9e-15 84.7 111 41.4
Solyc01g111720.4 Solanum lycopersicum HOM05D005442 ORTHO05D006450 8.9e-15 84.7 114 42.1
Sopen01g053760 Solanum pennellii HOM05D005442 ORTHO05D006450 8.9e-15 84.7 114 42.1
PGSC0003DMG400006166 Solanum tuberosum HOM05D005442 ORTHO05D006450 8.9e-15 84.7 114 42.1
Duzib132G0277 Durio zibethinus HOM05D005442 ORTHO05D006450 1.2e-14 84.3 103 46.6
MD05G1123900 Malus domestica HOM05D005442 ORTHO05D006450 1.2e-14 84.3 113 42.5
Glyma.20G106900 Glycine max HOM05D005442 ORTHO05D006450 1.5e-14 84.0 123 44.7
TWI31G1375 Tripterygium wilfordii HOM05D005442 ORTHO05D006450 1.5e-14 84.0 139 38.1
ATR0763G134 Amborella trichopoda HOM05D005442 ORTHO05D006450 2.0e-14 83.6 114 44.7
AUR62010020 Chenopodium quinoa HOM05D005442 ORTHO05D006450 2.0e-14 83.6 110 46.4
unitig_744.g24278 Utricularia gibba HOM05D005442 ORTHO05D006450 3.4e-14 82.8 113 41.6
Ah.01g023170 Amaranthus hybridus HOM05D005442 ORTHO05D006450 4.4e-14 82.4 102 45.1
Phvul.007G018400 Phaseolus vulgaris HOM05D005442 ORTHO05D006450 4.4e-14 82.4 113 41.6
Cpa.g.sc20.103 Carica papaya HOM05D005442 ORTHO05D006450 7.6e-14 81.6 105 44.8
Haze_13370 Corylus avellana HOM05D005442 ORTHO05D006450 7.6e-14 81.6 112 42.9
CANSAT56G0103 Cannabis sativa HOM05D005442 ORTHO05D006450 9.9e-14 81.3 109 42.2
COL.COLO4_17367 Corchorus olitorius HOM05D005442 ORTHO05D006450 9.9e-14 81.3 101 46.5
FvH4_2g15550 Fragaria vesca HOM05D005442 ORTHO05D006450 1.3e-13 80.9 126 41.3
FAN24G2500 Fragaria x ananassa HOM05D005442 ORTHO05D006450 1.3e-13 80.9 126 41.3
SGA_v2.0_scaffold58G20356 Striga asiatica HOM05D002097 ORTHO05D002248 1.3e-13 80.9 110 42.7
C03p57680 Brassica napus HOM05D005442 ORTHO05D006450 1.7e-13 80.5 46 87.0
FAN15G0807 Fragaria x ananassa HOM05D005442 ORTHO05D006450 2.2e-13 80.1 126 41.3
C03p57650 Brassica napus HOM05D005442 ORTHO05D006450 3.8e-13 79.3 55 74.5
BolC3t18039H Brassica oleracea HOM05D005442 ORTHO05D006450 3.8e-13 79.3 55 74.5
FAN27G2972 Fragaria x ananassa HOM05D005442 ORTHO05D006450 3.8e-13 79.3 126 40.5
Aqoxy6G02079 Aquilegia oxysepala HOM05D005442 ORTHO05D006450 4.9e-13 79.0 98 46.9
Hund06446 Selenicereus undatus HOM05D005442 ORTHO05D006450 8.4e-13 78.2 115 42.6
Lsat_1_v5_gn_6_13820 Lactuca sativa HOM05D005442 ORTHO05D006450 1.1e-12 77.8 113 38.9
BolC6t38580H Brassica oleracea HOM05D008551 ORTHO05D014539 1.4e-12 77.4 58 69.0
BolC6t38581H Brassica oleracea HOM05D008551 ORTHO05D014539 1.4e-12 77.4 58 69.0
BolC6t38582H Brassica oleracea HOM05D008551 ORTHO05D014539 1.4e-12 77.4 58 69.0
C06p34780 Brassica napus HOM05D008551 ORTHO05D014539 1.9e-12 77.0 60 68.3
Zm00001eb134390 Zea mays HOM05D005442 ORTHO05D006450 1.9e-12 77.0 109 44.0
arahy.Tifrunner.gnm1.ann1.WUXL4S Arachis hypogaea HOM05D005442 ORTHO05D006450 2.4e-12 76.6 124 39.5
arahy.Tifrunner.gnm1.ann1.ZGQ44R Arachis hypogaea HOM05D005442 ORTHO05D006450 2.4e-12 76.6 124 39.5
C06p34750 Brassica napus HOM05D008551 ORTHO05D014539 2.4e-12 76.6 58 69.0
QL11p051413 Quercus lobata HOM05D005442 ORTHO05D006450 2.4e-12 76.6 126 41.3
arahy.Tifrunner.gnm1.ann1.U87P2U Arachis hypogaea HOM05D005442 ORTHO05D006450 3.2e-12 76.3 111 42.3
Migut.B00066 Erythranthe guttata HOM05D005442 ORTHO05D006450 3.2e-12 76.3 114 43.0
PSO541G1416 Papaver somniferum HOM05D005442 ORTHO05D006450 3.2e-12 76.3 118 44.1
PSO675G1865 Papaver somniferum HOM05D005442 ORTHO05D006450 3.2e-12 76.3 114 44.7
PGR142G2067 Punica granatum HOM05D005442 ORTHO05D006450 3.2e-12 76.3 112 42.9
ECA233G3196 Erigeron canadensis HOM05D005442 ORTHO05D006450 5.4e-12 75.5 109 41.3
Gohir.A03G205700 Gossypium hirsutum HOM05D005442 ORTHO05D006450 7.1e-12 75.1 124 41.1
Os02g0101100 Oryza sativa ssp. japonica HOM05D005442 ORTHO05D006450 9.2e-12 74.7 101 43.6
Gorai.005G254900 Gossypium raimondii HOM05D005442 ORTHO05D006450 1.6e-11 73.9 124 40.3
C06p34790 Brassica napus HOM05D008551 ORTHO05D014539 2.7e-11 73.2 53 71.7
C06p34770 Brassica napus HOM05D008551 ORTHO05D014539 4.6e-11 72.4 60 66.7
HPP92_022198 Vanilla planifolia HOM05D005442 ORTHO05D006450 4.6e-11 72.4 133 39.1
C06p34760 Brassica napus HOM05D008551 ORTHO05D014539 7.8e-11 71.6 58 65.5
Gohir.D02G227000 Gossypium hirsutum HOM05D005442 ORTHO05D006450 7.8e-11 71.6 124 39.5
BraA09t38451Z Brassica rapa HOM05D008551 ORTHO05D013811 1.0e-10 71.2 53 71.7
BraA09t38452Z Brassica rapa HOM05D008551 ORTHO05D013811 1.0e-10 71.2 53 71.7
RcHm_v2.0_Chr6g0278721 Rosa chinensis HOM05D005442 ORTHO05D006450 1.0e-10 71.2 126 39.7
C03p62280 Brassica napus HOM05D008551 ORTHO05D014539 1.3e-10 70.9 60 65.0
CAN.G588.93 Capsicum annuum HOM05D005442 ORTHO05D006450 1.7e-10 70.5 104 45.2
SalBow1G0486 Salvia bowleyana HOM05D005442 ORTHO05D006450 1.7e-10 70.5 137 39.4
HPP92_022180 Vanilla planifolia HOM05D005442 ORTHO05D006450 2.3e-10 70.1 133 38.3
BolC3t18489H Brassica oleracea HOM05D008551 ORTHO05D013811 1.5e-09 67.4 57 66.7
FAN20G2789 Fragaria x ananassa HOM05D005442 ORTHO05D006450 1.5e-09 67.4 128 39.1
Glyma.10G282700 Glycine max HOM05D005442 ORTHO05D006450 1.9e-09 67.0 115 39.1
BolC6t37442H Brassica oleracea HOM05D008551 ORTHO05D027127 2.5e-09 66.6 86 48.8
Prupe.8G167900 Prunus persica HOM05D005442 ORTHO05D006450 4.3e-09 65.9 90 46.7
C06p22530 Brassica napus HOM05D008551 ORTHO05D027127 1.2e-08 64.3 86 48.8
CBR_g7972 Chara braunii HOM05D004690 ORTHO05D005527 1.6e-08 63.9 103 44.7
Pp3c14_5800 Physcomitrium patens HOM05D004690 ORTHO05D005527 1.6e-08 63.9 102 36.3
Rhsim09G0155200 Rhododendron simsii HOM05D005442 ORTHO05D006450 1.8e-07 60.5 65 52.3
Mapoly0090s0068 Marchantia polymorpha HOM05D004690 ORTHO05D005527 2.4e-07 60.1 100 38.0
Mapoly0037s0141 Marchantia polymorpha HOM05D005442 ORTHO05D006450 3.1e-07 59.7 104 33.7
BolC6t38578H Brassica oleracea HOM05D008551 ORTHO05D014539 5.3e-07 58.9 58 62.1
C06p34730 Brassica napus HOM05D008551 ORTHO05D014539 9.0e-07 58.2 54 63.0
BolC6t38576H Brassica oleracea HOM05D008551 ORTHO05D013811 9.0e-07 58.2 53 64.2
BolC6t38577H Brassica oleracea HOM05D008551 ORTHO05D013811 9.0e-07 58.2 53 64.2
Atru.chr3.3284 Acer truncatum HOM05D005442 ORTHO05D006450 2.0e-06 57.0 84 41.7
C06p34740 Brassica napus HOM05D008551 ORTHO05D013811 2.6e-06 56.6 48 64.6
HanXRQChr08g0227271 Helianthus annuus HOM05D005442 ORTHO05D006450 3.4e-06 56.2 97 39.2
Pp3c2_19940 Physcomitrium patens HOM05D004690 ORTHO05D005527 4.4e-06 55.8 102 32.4
Rhsim05G0053300 Rhododendron simsii HOM05D005442 ORTHO05D006450 9.9e-06 54.7 56 51.8


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