Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p40970 Brassica napus HOM05D003334 ORTHO05D004076 4.3e-56 221.1 112 100.0
BolC3t16384H Brassica oleracea HOM05D003334 ORTHO05D004076 3.7e-55 218.0 112 98.2
BolC3t16371H Brassica oleracea HOM05D003334 ORTHO05D004076 2.4e-54 215.3 112 97.3
BolC3t16373H Brassica oleracea HOM05D003334 ORTHO05D004076 5.3e-54 214.2 112 96.4
A03p33670 Brassica napus HOM05D003334 ORTHO05D004076 4.5e-53 211.1 123 90.2
C03p40860 Brassica napus HOM05D003334 ORTHO05D004076 4.5e-53 211.1 123 90.2
BolC3t16365H Brassica oleracea HOM05D003334 ORTHO05D004076 4.5e-53 211.1 123 90.2
BraA03t12541Z Brassica rapa HOM05D003334 ORTHO05D004076 4.5e-53 211.1 123 90.2
BcaC01g04366 Brassica carinata HOM05D003334 ORTHO05D004076 5.8e-53 210.7 122 90.2
BolC3t16362H Brassica oleracea HOM05D003334 ORTHO05D004076 1.3e-52 209.5 123 89.4
BcaB04g19317 Brassica carinata HOM05D003334 ORTHO05D004076 2.9e-52 208.4 123 88.6
BcaC09g47791 Brassica carinata HOM05D003334 ORTHO05D004076 1.1e-51 206.5 123 87.8
BcaB04g21362 Brassica carinata HOM05D003334 ORTHO05D004076 2.5e-51 205.3 123 87.0
AL3G14620 Arabidopsis lyrata HOM05D003334 ORTHO05D004076 4.2e-51 204.5 123 86.2
Thhalv10020864m.g Eutrema salsugineum HOM05D003334 ORTHO05D004076 4.2e-51 204.5 123 86.2
BolC1t05738H Brassica oleracea HOM05D003334 ORTHO05D004076 7.1e-51 203.8 123 87.0
AT3G04600 Arabidopsis thaliana HOM05D003334 ORTHO05D004076 9.3e-51 203.4 123 86.2
CARHR078790 Cardamine hirsuta HOM05D003334 ORTHO05D004076 9.3e-51 203.4 123 86.2
Carub.0003s0375 Capsella rubella HOM05D003334 ORTHO05D004076 1.2e-50 203.0 123 85.4
A01p40810 Brassica napus HOM05D003334 ORTHO05D004076 2.1e-50 202.2 123 86.2
BNapus_Darmor_BZH_scaffold_78p00900 Brassica napus HOM05D003334 ORTHO05D004076 2.1e-50 202.2 123 86.2
BraA01t04517Z Brassica rapa HOM05D003334 ORTHO05D004076 2.1e-50 202.2 123 86.2
Aa31LG5G20570 Aethionema arabicum HOM05D003334 ORTHO05D004076 1.3e-49 199.5 123 83.7
THA.LOC104821663 Tarenaya hassleriana HOM05D003334 ORTHO05D004076 1.5e-48 196.1 123 82.9
THA.LOC104802839 Tarenaya hassleriana HOM05D003334 ORTHO05D004076 3.3e-48 194.9 123 82.1
Sp3g03440 Schrenkiella parvula HOM05D003334 ORTHO05D004076 5.7e-48 194.1 123 83.7
Lalb_Chr21g0312861 Lupinus albus HOM05D003334 ORTHO05D004076 3.7e-47 191.4 123 78.0
CiPaw.07G196900 Carya illinoinensis HOM05D003334 ORTHO05D004076 1.4e-46 189.5 123 78.9
Sed0023632 Sechium edule HOM05D003334 ORTHO05D004076 3.1e-46 188.3 123 79.7
QL01p002104 Quercus lobata HOM05D003334 ORTHO05D004076 4.1e-46 188.0 121 78.5
Hund21749 Selenicereus undatus HOM05D003334 ORTHO05D004076 4.1e-46 188.0 123 78.9
Phvul.010G046300 Phaseolus vulgaris HOM05D003334 ORTHO05D004076 5.3e-46 187.6 123 76.4
Psat4g222840 Pisum sativum HOM05D003334 ORTHO05D004076 5.3e-46 187.6 123 77.2
QL06p038393 Quercus lobata HOM05D003334 ORTHO05D004076 5.3e-46 187.6 121 78.5
arahy.Tifrunner.gnm1.ann1.GB3JX0 Arachis hypogaea HOM05D003334 ORTHO05D004076 6.9e-46 187.2 121 78.5
Manes.12G077800 Manihot esculenta HOM05D003334 ORTHO05D004076 6.9e-46 187.2 123 77.2
Duzib170G0367 Durio zibethinus HOM05D003334 ORTHO05D004076 1.2e-45 186.4 123 76.4
Thecc.09G264900 Theobroma cacao HOM05D003334 ORTHO05D004076 1.2e-45 186.4 123 76.4
Glyma.03G108900 Glycine max HOM05D003334 ORTHO05D004076 1.5e-45 186.0 123 75.6
SGA_v2.0_scaffold269G46296 Striga asiatica HOM05D003334 ORTHO05D004076 1.5e-45 186.0 123 78.0
SGA_v2.0_scaffold447G51751 Striga asiatica HOM05D003334 ORTHO05D004076 1.5e-45 186.0 123 78.0
Actinidia29400 Actinidia chinensis HOM05D003334 ORTHO05D004076 2.0e-45 185.7 123 78.0
ClCG09G011880 Citrullus lanatus HOM05D003334 ORTHO05D004076 2.0e-45 185.7 123 78.0
Glyma.13G008200 Glycine max HOM05D003334 ORTHO05D004076 2.0e-45 185.7 123 75.6
Oeu063204.2 Olea europaea HOM05D003334 ORTHO05D004076 2.0e-45 185.7 123 76.4
Psat2g164840 Pisum sativum HOM05D003334 ORTHO05D004076 2.0e-45 185.7 123 76.4
VMungo0331G0230 Vigna mungo HOM05D003334 ORTHO05D004076 2.0e-45 185.7 123 74.8
MD04G1236500 Malus domestica HOM05D003334 ORTHO05D004076 2.6e-45 185.3 123 78.0
Medtr8g007305 Medicago truncatula HOM05D003334 ORTHO05D004076 2.6e-45 185.3 123 76.4
Gohir.D09G101200 Gossypium hirsutum HOM05D003334 ORTHO05D004076 3.4e-45 184.9 123 75.6
Gorai.006G118600 Gossypium raimondii HOM05D003334 ORTHO05D004076 3.4e-45 184.9 123 75.6
TAR636G1778 Trochodendron aralioides HOM05D003334 ORTHO05D004076 3.4e-45 184.9 123 77.2
Atru.chr7.238 Acer truncatum HOM05D003334 ORTHO05D004076 4.5e-45 184.5 123 76.4
MD12G1255800 Malus domestica HOM05D003334 ORTHO05D004076 4.5e-45 184.5 121 78.5
Nn1g02302 Nelumbo nucifera HOM05D003334 ORTHO05D004076 4.5e-45 184.5 123 77.2
PSO170G1996 Papaver somniferum HOM05D003334 ORTHO05D004076 4.5e-45 184.5 123 77.2
Solyc08g074410.4 Solanum lycopersicum HOM05D003334 ORTHO05D004076 4.5e-45 184.5 123 76.4
Sopen08g023060 Solanum pennellii HOM05D003334 ORTHO05D004076 4.5e-45 184.5 123 76.4
Ca_14800_v3 Cicer arietinum L. HOM05D003334 ORTHO05D004076 5.9e-45 184.1 123 75.6
Dinv04743 Davidia involucrata HOM05D003334 ORTHO05D004076 5.9e-45 184.1 123 76.4
Lj3g0011249 Lotus japonicus HOM05D003334 ORTHO05D004076 5.9e-45 184.1 123 76.4
Prupe.7G057000 Prunus persica HOM05D003334 ORTHO05D004076 5.9e-45 184.1 123 78.0
TPR.G5320 Trifolium pratense HOM05D003334 ORTHO05D004076 5.9e-45 184.1 123 75.6
Dinv27617 Davidia involucrata HOM05D003334 ORTHO05D004076 7.6e-45 183.7 123 76.4
HanXRQChr17g0559071 Helianthus annuus HOM05D003334 ORTHO05D004076 7.6e-45 183.7 121 78.5
Ciclev10008518m.g Citrus clementina HOM05D003334 ORTHO05D004076 1.0e-44 183.3 123 75.6
Rhsim12G0003500 Rhododendron simsii HOM05D003334 ORTHO05D004076 1.7e-44 182.6 123 76.4
unitig_32.g11639 Utricularia gibba HOM05D003334 ORTHO05D004076 2.2e-44 182.2 121 76.9
HPP92_011708 Vanilla planifolia HOM05D003334 ORTHO05D004076 2.2e-44 182.2 121 76.9
Duzib168G1687 Durio zibethinus HOM05D003334 ORTHO05D004076 2.9e-44 181.8 123 74.0
Sc06g0005190 Simmondsia chinensis HOM05D003334 ORTHO05D004076 2.9e-44 181.8 123 75.6
Lsat_1_v5_gn_2_16301 Lactuca sativa HOM05D003334 ORTHO05D004076 3.8e-44 181.4 123 74.8
Prupe.7G057800 Prunus persica HOM05D003334 ORTHO05D004076 3.8e-44 181.4 123 77.2
Gohir.A09G104500 Gossypium hirsutum HOM05D003334 ORTHO05D004076 5.0e-44 181.0 123 74.0
Hma1.2p1_0123F.1_g058080 Hydrangea macrophylla HOM05D003334 ORTHO05D004076 5.0e-44 181.0 123 76.4
Oeu044972.2 Olea europaea HOM05D003334 ORTHO05D004076 5.0e-44 181.0 123 74.8
GSVIVG01020576001 Vitis vinifera HOM05D003334 ORTHO05D004076 5.0e-44 181.0 123 75.6
Aqoxy7G02117 Aquilegia oxysepala HOM05D003334 ORTHO05D004076 6.5e-44 180.6 123 77.2
PSO063G6945 Papaver somniferum HOM05D003334 ORTHO05D004076 6.5e-44 180.6 123 76.4
AUR62009179 Chenopodium quinoa HOM05D003334 ORTHO05D004076 8.5e-44 180.3 123 74.8
MSTRG.11832 Avicennia marina HOM05D003334 ORTHO05D004076 1.1e-43 179.9 123 75.6
CSS0022391 Camellia sinensis var. sinensis HOM05D003334 ORTHO05D004076 1.1e-43 179.9 121 75.2
Thhalv10004344m.g Eutrema salsugineum HOM05D003334 ORTHO05D004076 1.1e-43 179.9 123 76.4
CANSAT54G0453 Cannabis sativa HOM05D003334 ORTHO05D004076 1.9e-43 179.1 123 73.2
RcHm_v2.0_Chr7g0223011 Rosa chinensis HOM05D003334 ORTHO05D004076 1.9e-43 179.1 123 75.6
AUR62005286 Chenopodium quinoa HOM05D003334 ORTHO05D004076 2.5e-43 178.7 123 74.0
Migut.E01397 Erythranthe guttata HOM05D003334 ORTHO05D004076 2.5e-43 178.7 123 72.4
FAN17G0794 Fragaria x ananassa HOM05D003334 ORTHO05D004076 2.5e-43 178.7 123 75.6
TAR365G0738 Trochodendron aralioides HOM05D003334 ORTHO05D004076 2.5e-43 178.7 118 77.1
Aqoxy7G03650 Aquilegia oxysepala HOM05D003334 ORTHO05D004076 3.2e-43 178.3 123 75.6
RcHm_v2.0_Chr3g0493481 Rosa chinensis HOM05D003334 ORTHO05D004076 4.2e-43 177.9 123 74.8
FvH4_4g11950 Fragaria vesca HOM05D003334 ORTHO05D004076 7.2e-43 177.2 123 74.8
FAN12G4063 Fragaria x ananassa HOM05D003334 ORTHO05D004076 7.2e-43 177.2 123 74.8
Eucgr.B01628 Eucalyptus grandis HOM05D003334 ORTHO05D004076 9.3e-43 176.8 121 76.9
FAN22G0185 Fragaria x ananassa HOM05D003334 ORTHO05D004076 9.3e-43 176.8 123 74.8
CSS0036286 Camellia sinensis var. sinensis HOM05D003334 ORTHO05D004076 1.2e-42 176.4 121 74.4
HanXRQChr11g0333651 Helianthus annuus HOM05D003334 ORTHO05D004076 1.6e-42 176.0 123 73.2
Potri.009G159300 Populus trichocarpa HOM05D003334 ORTHO05D004076 1.6e-42 176.0 123 73.2
Eucgr.B01376 Eucalyptus grandis HOM05D003334 ORTHO05D004076 2.1e-42 175.6 121 76.9
Sabra09G0124600 Salix brachista HOM05D003334 ORTHO05D004076 6.1e-42 174.1 123 73.2
CDE08G0778 Ceratophyllum demersum HOM05D003334 ORTHO05D004076 7.9e-42 173.7 123 72.4
ECA238G1984 Erigeron canadensis HOM05D003334 ORTHO05D004076 7.9e-42 173.7 123 70.7
CAN.G195.16 Capsicum annuum HOM05D003334 ORTHO05D004076 2.3e-41 172.2 123 74.0
PGR119G1638 Punica granatum HOM05D003334 ORTHO05D004076 3.0e-41 171.8 123 74.0
Mapoly0053s0020 Marchantia polymorpha HOM05D003334 ORTHO05D004076 5.1e-41 171.0 121 73.6
Os12g0540900 Oryza sativa ssp. japonica HOM05D003334 ORTHO05D004076 6.7e-41 170.6 121 69.4
Nitab4.5_0000288g0150 Nicotiana tabacum HOM05D003334 ORTHO05D004076 1.1e-40 169.9 111 78.4
Atru.chr5.3183 Acer truncatum HOM05D003334 ORTHO05D004076 1.5e-40 169.5 117 72.6
TWI34G0756 Tripterygium wilfordii HOM05D003334 ORTHO05D004076 1.5e-40 169.5 123 71.5
Aa31LG5G15020 Aethionema arabicum HOM05D003334 ORTHO05D004076 3.3e-40 168.3 123 72.4
TWI15G0949 Tripterygium wilfordii HOM05D003334 ORTHO05D004076 4.3e-40 167.9 123 70.7
Peaxi162Scf00213g01416 Petunia axillaris HOM05D003334 ORTHO05D004076 7.4e-40 167.2 150 63.3
COL.COLO4_25317 Corchorus olitorius HOM05D003334 ORTHO05D004076 9.7e-40 166.8 123 70.7
Zm00001eb054210 Zea mays HOM05D003334 ORTHO05D004076 9.7e-40 166.8 121 69.4
Ah.15g091810 Amaranthus hybridus HOM05D003334 ORTHO05D004076 1.3e-39 166.4 123 68.3
ECA233G4312 Erigeron canadensis HOM05D003334 ORTHO05D004076 1.3e-39 166.4 121 69.4
A07p01960 Brassica napus HOM05D003334 ORTHO05D004076 1.7e-39 166.0 122 71.3
BraA07t27995Z Brassica rapa HOM05D003334 ORTHO05D004076 1.7e-39 166.0 122 71.3
Sp6g11650 Schrenkiella parvula HOM05D003334 ORTHO05D004076 2.8e-39 165.2 122 73.0
BcaC09g48536 Brassica carinata HOM05D003334 ORTHO05D004076 1.1e-38 163.3 122 69.7
SalBow8G4285 Salvia bowleyana HOM05D003334 ORTHO05D004076 1.1e-38 163.3 111 77.5
Sabra04G0133700 Salix brachista HOM05D003334 ORTHO05D004076 1.4e-38 162.9 124 66.1
BolC7t40804H Brassica oleracea HOM05D003334 ORTHO05D004076 9.1e-38 160.2 122 69.7
arahy.Tifrunner.gnm1.ann1.L2SHRD Arachis hypogaea HOM05D003334 ORTHO05D004076 1.2e-37 159.8 106 76.4
Oeu028097.1 Olea europaea HOM05D003334 ORTHO05D004076 2.0e-37 159.1 109 75.2
DCAR_018748 Daucus carota HOM05D003334 ORTHO05D004076 2.6e-37 158.7 106 77.4
AagrBONN_evm.TU.Sc2ySwM_228.5148 Anthoceros agrestis HOM05D003334 ORTHO05D004076 4.5e-37 157.9 117 71.8
BcaB04g21381 Brassica carinata HOM05D003334 ORTHO05D004076 1.0e-36 156.8 122 66.4
ATR0743G002 Amborella trichopoda HOM05D003334 ORTHO05D004076 1.3e-36 156.4 112 70.5
MBI07_g42069_MAGBIO Magnolia biondii HOM05D003334 ORTHO05D004076 1.7e-36 156.0 106 73.6
BcaB06g25549 Brassica carinata HOM05D003334 ORTHO05D004076 2.2e-36 155.6 122 67.2
EL10Ac4g09810 Beta vulgaris HOM05D003334 ORTHO05D004076 3.8e-36 154.8 173 53.2
Lj7A725T58 Lonicera japonica HOM05D003334 ORTHO05D004076 3.8e-36 154.8 107 74.8
BcaC09g47814 Brassica carinata HOM05D003334 ORTHO05D004076 1.1e-35 153.3 116 68.1
BolC1t05722H Brassica oleracea HOM05D003334 ORTHO05D004076 1.1e-35 153.3 116 68.1
Cfa013451 Carpinus fangiana HOM05D003334 ORTHO05D004076 1.9e-35 152.5 107 73.8
BcaC01g04365 Brassica carinata HOM05D003334 ORTHO05D004076 2.7e-34 148.7 178 55.1
SHI16564 Sapria himalayana HOM05D003334 ORTHO05D004076 2.7e-34 148.7 95 69.5
Haze_07729 Corylus avellana HOM05D003334 ORTHO05D004076 3.6e-34 148.3 126 63.5
Pp3c2_27540 Physcomitrium patens HOM05D003334 ORTHO05D004076 1.0e-33 146.7 120 63.3
vmacro00932 Vaccinium macrocarpon HOM05D003334 ORTHO05D004076 1.8e-33 146.0 106 69.8
PRCOL_00004976 Prasinoderma coloniale HOM05D003334 ORTHO05D004076 8.8e-33 143.7 118 60.2
BcaB03g16657 Brassica carinata HOM05D003334 ORTHO05D004076 2.6e-32 142.1 120 65.8
SMO143G0103 Selaginella moellendorffii HOM05D003334 ORTHO05D004076 5.7e-32 141.0 122 61.5
BNapus_Darmor_BZH_scaffold_78p01040 Brassica napus HOM05D004384 ORTHO05D005797 3.7e-31 138.3 106 67.0
Cre12.g522350 Chlamydomonas reinhardtii HOM05D003334 ORTHO05D004076 4.8e-31 137.9 117 60.7
BraA01t04501Z Brassica rapa HOM05D004384 ORTHO05D005797 1.8e-30 136.0 106 66.0
Hma1.2p1_1064F.1_g253620 Hydrangea macrophylla HOM05D003334 ORTHO05D004076 2.0e-29 132.5 100 69.0
FAN07G2734 Fragaria x ananassa HOM05D003334 ORTHO05D004076 1.6e-26 122.9 133 56.4
Cc02_g30090 Coffea canephora HOM05D003334 ORTHO05D004076 2.1e-26 122.5 78 75.6
CsaV3_5G014480 Cucumis sativus L. HOM05D003334 ORTHO05D004076 6.1e-26 120.9 83 74.7
MCO14G308 Micromonas commoda HOM05D003334 ORTHO05D004076 1.1e-24 116.7 123 51.2
Thhalv10003092m.g Eutrema salsugineum HOM05D003334 ORTHO05D004076 3.7e-23 111.7 123 56.1
TPR.G21208 Trifolium pratense HOM05D003334 ORTHO05D004076 1.6e-21 106.3 96 60.4
SEGI_09752 Sequoiadendron giganteum HOM05D003334 ORTHO05D004076 4.5e-21 104.8 62 85.5
Nitab4.5_0009273g0030 Nicotiana tabacum HOM05D003334 ORTHO05D004076 3.8e-20 101.7 112 54.5
Haze_26816 Corylus avellana HOM05D003334 ORTHO05D004076 1.9e-19 99.4 117 45.3
SMO115G0240 Selaginella moellendorffii HOM05D003334 ORTHO05D004076 1.4e-17 93.2 96 45.8
Nitab4.5_0003036g0010 Nicotiana tabacum HOM05D003334 ORTHO05D004076 8.8e-17 90.5 72 65.3
RcHm_v2.0_Chr7g0219201 Rosa chinensis HOM05D003334 ORTHO05D004076 5.3e-14 81.3 51 82.4
Nitab4.5_0009273g0020 Nicotiana tabacum HOM05D003334 ORTHO05D004076 2.0e-13 79.3 48 85.4
QL12p030357 Quercus lobata HOM05D003334 ORTHO05D004076 2.0e-13 79.3 78 57.7
CBR_g37637 Chara braunii HOM05D003334 ORTHO05D004076 2.7e-13 79.0 115 46.1
C07p04090 Brassica napus HOM05D003334 ORTHO05D004076 1.3e-12 76.6 68 60.3
Nitab4.5_0006136g0030 Nicotiana tabacum HOM05D000111 ORTHO05D001334 3.0e-09 65.5 37 86.5
BcaC06g36447 Brassica carinata HOM05D003334 ORTHO05D000065 2.6e-08 62.4 38 84.2
Peaxi162Scf00020g00242 Petunia axillaris HOM05D003334 ORTHO05D004076 3.4e-08 62.0 65 53.8
Sed0014785 Sechium edule HOM05D003334 ORTHO05D004076 1.3e-07 60.1 47 70.2
Peaxi162Scf00145g00156 Petunia axillaris HOM05D003334 ORTHO05D004076 2.2e-07 59.3 40 67.5
CsaV3_5G014470 Cucumis sativus L. HOM05D003334 ORTHO05D004076 7.0e-06 54.3 29 89.7


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