Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p39670 Brassica napus HOM05D004883 ORTHO05D005766 7.1e-56 220.3 108 100.0
BcaB07g31037 Brassica carinata HOM05D004883 ORTHO05D005766 9.6e-45 183.3 107 89.7
BcaC04g21964 Brassica carinata HOM05D004883 ORTHO05D005766 9.6e-45 183.3 107 89.7
A09p20040 Brassica napus HOM05D004883 ORTHO05D005766 9.6e-45 183.3 107 89.7
C09p25420 Brassica napus HOM05D004883 ORTHO05D005766 9.6e-45 183.3 107 89.7
BolC9t55441H Brassica oleracea HOM05D004883 ORTHO05D005766 9.6e-45 183.3 107 89.7
BraA09t37617Z Brassica rapa HOM05D004883 ORTHO05D005766 9.6e-45 183.3 107 89.7
Sp2g07620 Schrenkiella parvula HOM05D004883 ORTHO05D005766 9.6e-45 183.3 107 89.7
BcaC06g31741 Brassica carinata HOM05D004883 ORTHO05D005766 2.1e-44 182.2 107 88.8
Carub.0008s0602 Capsella rubella HOM05D004883 ORTHO05D005766 2.8e-44 181.8 107 88.8
Thhalv10003291m.g Eutrema salsugineum HOM05D004883 ORTHO05D005766 2.8e-44 181.8 107 88.8
AT5G42890 Arabidopsis thaliana HOM05D004883 ORTHO05D005766 6.2e-44 180.6 107 86.9
AL8G18060 Arabidopsis lyrata HOM05D004883 ORTHO05D005766 8.2e-44 180.3 107 86.9
THA.LOC104814168 Tarenaya hassleriana HOM05D004883 ORTHO05D005766 1.1e-43 179.9 107 86.9
THA.LOC104822849 Tarenaya hassleriana HOM05D004883 ORTHO05D005766 4.0e-43 177.9 107 86.0
Aa31LG9G12950 Aethionema arabicum HOM05D004883 ORTHO05D005766 5.3e-43 177.6 106 86.8
CARHR181250 Cardamine hirsuta HOM05D004883 ORTHO05D005766 7.6e-42 173.7 107 85.0
Duzib093G0126 Durio zibethinus HOM05D004883 ORTHO05D005766 4.9e-41 171.0 108 78.7
Atru.chr13.693 Acer truncatum HOM05D004883 ORTHO05D005766 6.5e-41 170.6 107 77.6
Cpa.g.sc49.21 Carica papaya HOM05D004883 ORTHO05D005766 1.1e-40 169.9 107 79.4
Gohir.D05G205400 Gossypium hirsutum HOM05D004883 ORTHO05D005766 2.5e-40 168.7 107 78.5
PGR031G0707 Punica granatum HOM05D004883 ORTHO05D005766 2.5e-40 168.7 107 77.6
Gohir.D01G108200 Gossypium hirsutum HOM05D004883 ORTHO05D005766 3.2e-40 168.3 107 76.6
COL.COLO4_26509 Corchorus olitorius HOM05D004883 ORTHO05D005766 5.5e-40 167.5 107 78.5
Thecc.08G007300 Theobroma cacao HOM05D004883 ORTHO05D005766 7.1e-40 167.2 108 76.9
TAR381G1103 Trochodendron aralioides HOM05D004883 ORTHO05D005766 7.1e-40 167.2 108 77.8
Gohir.A05G202300 Gossypium hirsutum HOM05D004883 ORTHO05D005766 1.2e-39 166.4 107 77.6
Gorai.002G132400 Gossypium raimondii HOM05D004883 ORTHO05D005766 1.2e-39 166.4 108 75.9
Gorai.009G211700 Gossypium raimondii HOM05D004883 ORTHO05D005766 1.2e-39 166.4 107 77.6
GSVIVG01009495001 Vitis vinifera HOM05D004883 ORTHO05D005766 1.2e-39 166.4 108 77.8
Gohir.A01G119900 Gossypium hirsutum HOM05D004883 ORTHO05D005766 1.6e-39 166.0 108 75.9
Nn1g04858 Nelumbo nucifera HOM05D004883 ORTHO05D005766 1.6e-39 166.0 107 78.5
MSTRG.1348 Avicennia marina HOM05D004883 ORTHO05D005766 2.1e-39 165.6 108 76.9
Ciclev10002854m.g Citrus clementina HOM05D004883 ORTHO05D005766 6.0e-39 164.1 107 75.7
Dinv35960 Davidia involucrata HOM05D004883 ORTHO05D005766 6.0e-39 164.1 108 75.9
MD15G1083000 Malus domestica HOM05D004883 ORTHO05D005766 1.3e-38 162.9 107 77.6
QL02p004805 Quercus lobata HOM05D004883 ORTHO05D005766 1.3e-38 162.9 106 77.4
CiPaw.16G043800 Carya illinoinensis HOM05D004883 ORTHO05D005766 1.8e-38 162.5 108 75.9
AUR62012534 Chenopodium quinoa HOM05D004883 ORTHO05D005766 2.3e-38 162.2 107 74.8
AUR62014661 Chenopodium quinoa HOM05D004883 ORTHO05D005766 2.3e-38 162.2 107 74.8
AUR62044174 Chenopodium quinoa HOM05D004883 ORTHO05D005766 2.3e-38 162.2 107 74.8
VMungo0647G0758 Vigna mungo HOM05D004883 ORTHO05D005766 2.3e-38 162.2 107 76.6
Migut.C00579 Erythranthe guttata HOM05D004883 ORTHO05D005766 3.0e-38 161.8 108 75.0
Glyma.17G242300 Glycine max HOM05D004883 ORTHO05D005766 3.9e-38 161.4 107 76.6
Medtr1g019430 Medicago truncatula HOM05D004883 ORTHO05D005766 3.9e-38 161.4 107 77.6
Phvul.001G022000 Phaseolus vulgaris HOM05D004883 ORTHO05D005766 5.1e-38 161.0 107 76.6
Migut.N02708 Erythranthe guttata HOM05D004883 ORTHO05D005766 6.7e-38 160.6 108 74.1
Lsat_1_v5_gn_4_125820 Lactuca sativa HOM05D004883 ORTHO05D005766 6.7e-38 160.6 107 76.6
Oeu057282.1 Olea europaea HOM05D004883 ORTHO05D005766 6.7e-38 160.6 108 75.0
Prupe.1G435500 Prunus persica HOM05D004883 ORTHO05D005766 6.7e-38 160.6 107 74.8
SalBow7G2082 Salvia bowleyana HOM05D004883 ORTHO05D005766 6.7e-38 160.6 108 75.0
MD08G1101600 Malus domestica HOM05D004883 ORTHO05D005766 8.7e-38 160.2 107 75.7
Rhsim07G0228400 Rhododendron simsii HOM05D004883 ORTHO05D005766 8.7e-38 160.2 108 74.1
Peaxi162Scf00010g00308 Petunia axillaris HOM05D004883 ORTHO05D005766 1.1e-37 159.8 108 75.9
arahy.Tifrunner.gnm1.ann1.09A9GY Arachis hypogaea HOM05D004883 ORTHO05D005766 1.5e-37 159.5 107 74.8
arahy.Tifrunner.gnm1.ann1.B0E7W8 Arachis hypogaea HOM05D004883 ORTHO05D005766 1.5e-37 159.5 107 74.8
Haze_17525 Corylus avellana HOM05D004883 ORTHO05D005766 1.5e-37 159.5 107 75.7
HanXRQChr14g0439621 Helianthus annuus HOM05D004883 ORTHO05D005766 1.5e-37 159.5 107 74.8
Hma1.2p1_0982F.1_g244010 Hydrangea macrophylla HOM05D004883 ORTHO05D005766 1.5e-37 159.5 108 73.1
Lj5g0012185 Lotus japonicus HOM05D004883 ORTHO05D005766 1.5e-37 159.5 107 75.7
TPR.G3781 Trifolium pratense HOM05D004883 ORTHO05D005766 1.5e-37 159.5 107 75.7
Actinidia38058 Actinidia chinensis HOM05D004883 ORTHO05D005766 1.9e-37 159.1 108 75.0
vmacro04449 Vaccinium macrocarpon HOM05D004883 ORTHO05D005766 1.9e-37 159.1 108 74.1
ATR1102G009 Amborella trichopoda HOM05D004883 ORTHO05D005766 3.3e-37 158.3 107 74.8
Glyma.14G082800 Glycine max HOM05D004883 ORTHO05D005766 3.3e-37 158.3 107 74.8
PSO170G5588 Papaver somniferum HOM05D004883 ORTHO05D005766 3.3e-37 158.3 107 72.9
PSO210G0389 Papaver somniferum HOM05D004883 ORTHO05D005766 3.3e-37 158.3 107 72.9
Ah.09g236860 Amaranthus hybridus HOM05D004883 ORTHO05D005766 4.3e-37 157.9 107 72.0
Solyc04g078920.3 Solanum lycopersicum HOM05D004883 ORTHO05D005766 4.3e-37 157.9 108 74.1
Sopen04g032520 Solanum pennellii HOM05D004883 ORTHO05D005766 4.3e-37 157.9 108 74.1
EL10Ac8g19960 Beta vulgaris HOM05D004883 ORTHO05D005766 5.7e-37 157.5 108 71.3
ECA232G2590 Erigeron canadensis HOM05D004883 ORTHO05D005766 5.7e-37 157.5 107 74.8
Hund21302 Selenicereus undatus HOM05D004883 ORTHO05D005766 5.7e-37 157.5 106 71.7
Sc02g0007090 Simmondsia chinensis HOM05D004883 ORTHO05D005766 5.7e-37 157.5 107 72.9
SalBow3G1199 Salvia bowleyana HOM05D004883 ORTHO05D005766 7.4e-37 157.1 108 74.1
Gohir.D06G016900 Gossypium hirsutum HOM05D004883 ORTHO05D005766 1.3e-36 156.4 107 72.0
Gorai.010G019800 Gossypium raimondii HOM05D004883 ORTHO05D005766 1.3e-36 156.4 107 72.0
Psat1g147680 Pisum sativum HOM05D004883 ORTHO05D005766 1.3e-36 156.4 107 73.8
PGSC0003DMG400007973 Solanum tuberosum HOM05D004883 ORTHO05D005766 1.3e-36 156.4 108 73.1
FvH4_2g34441 Fragaria vesca HOM05D004883 ORTHO05D005766 2.2e-36 155.6 107 72.0
Lalb_Chr22g0355131 Lupinus albus HOM05D004883 ORTHO05D005766 2.2e-36 155.6 107 73.8
Cc10_g04160 Coffea canephora HOM05D004883 ORTHO05D005766 3.7e-36 154.8 108 71.3
DCAR_012777 Daucus carota HOM05D004883 ORTHO05D005766 4.8e-36 154.5 108 70.4
FAN20G2534 Fragaria x ananassa HOM05D004883 ORTHO05D005766 4.8e-36 154.5 107 71.0
FAN27G2225 Fragaria x ananassa HOM05D004883 ORTHO05D005766 6.3e-36 154.1 106 70.8
HanXRQChr05g0150871 Helianthus annuus HOM05D004883 ORTHO05D005766 6.3e-36 154.1 107 72.9
Aqoxy5G01236 Aquilegia oxysepala HOM05D004883 ORTHO05D005766 8.2e-36 153.7 107 72.0
CDE08G1634 Ceratophyllum demersum HOM05D004883 ORTHO05D005766 8.2e-36 153.7 107 72.9
Lsat_1_v5_gn_6_112040 Lactuca sativa HOM05D004883 ORTHO05D005766 8.2e-36 153.7 106 72.6
Ca_13291_v3 Cicer arietinum L. HOM05D004883 ORTHO05D005766 1.1e-35 153.3 107 69.2
Eucgr.F02346 Eucalyptus grandis HOM05D004883 ORTHO05D005766 1.1e-35 153.3 138 61.6
Oeu044836.1 Olea europaea HOM05D004883 ORTHO05D005766 1.1e-35 153.3 108 71.3
RcHm_v2.0_Chr6g0307931 Rosa chinensis HOM05D004883 ORTHO05D005766 1.4e-35 152.9 107 71.0
Sed0005554 Sechium edule HOM05D004883 ORTHO05D005766 1.4e-35 152.9 108 66.7
BcaC09g50201 Brassica carinata HOM05D004883 ORTHO05D005766 1.8e-35 152.5 107 75.7
CSS0025959 Camellia sinensis var. sinensis HOM05D004883 ORTHO05D005766 1.8e-35 152.5 108 70.4
CSS0031938 Camellia sinensis var. sinensis HOM05D004883 ORTHO05D005766 1.8e-35 152.5 108 70.4
Os06g0211300 Oryza sativa ssp. japonica HOM05D004883 ORTHO05D005766 2.4e-35 152.1 107 69.2
BcaC01g04518 Brassica carinata HOM05D004883 ORTHO05D005766 9.0e-35 150.2 75 100.0
ECA246G2602 Erigeron canadensis HOM05D004883 ORTHO05D005766 1.2e-34 149.8 107 71.0
TWI56G0859 Tripterygium wilfordii HOM05D004883 ORTHO05D005766 1.2e-34 149.8 103 70.9
DCAR_020929 Daucus carota HOM05D004883 ORTHO05D005766 1.5e-34 149.4 107 67.3
TWI56G0476 Tripterygium wilfordii HOM05D004883 ORTHO05D005766 2.6e-34 148.7 105 69.5
ClCG05G019880 Citrullus lanatus HOM05D004883 ORTHO05D005766 5.9e-34 147.5 107 66.4
Duzib041G0234 Durio zibethinus HOM05D004883 ORTHO05D005766 1.3e-33 146.4 108 69.4
Nitab4.5_0000287g0320 Nicotiana tabacum HOM05D004883 ORTHO05D005766 1.3e-33 146.4 101 74.3
Nitab4.5_0003118g0020 Nicotiana tabacum HOM05D004883 ORTHO05D005766 1.3e-33 146.4 101 74.3
TWI36G0538 Tripterygium wilfordii HOM05D004883 ORTHO05D005766 1.3e-33 146.4 105 70.5
CsaV3_4G034310 Cucumis sativus L. HOM05D004883 ORTHO05D005766 2.2e-33 145.6 107 64.5
Os02g0765800 Oryza sativa ssp. japonica HOM05D004883 ORTHO05D005766 5.0e-33 144.4 107 66.4
FvH4_2g34440 Fragaria vesca HOM05D004883 ORTHO05D005766 6.5e-33 144.1 107 66.4
Pp3c24_4700 Physcomitrium patens HOM05D004883 ORTHO05D005766 1.1e-32 143.3 106 69.8
Manes.05G174000 Manihot esculenta HOM05D004883 ORTHO05D005766 2.5e-32 142.1 106 67.0
MELO3C016751.2 Cucumis melo HOM05D004883 ORTHO05D005766 4.2e-32 141.4 113 61.1
SEGI_37934 Sequoiadendron giganteum HOM05D004883 ORTHO05D005766 4.2e-32 141.4 106 65.1
Mapoly0033s0053 Marchantia polymorpha HOM05D004883 ORTHO05D005766 2.1e-31 139.0 106 67.0
SMO169G0122 Selaginella moellendorffii HOM05D004883 ORTHO05D005766 3.6e-31 138.3 106 67.0
Sabra02G0098900 Salix brachista HOM05D004883 ORTHO05D005766 4.6e-31 137.9 106 64.2
Hund23571 Selenicereus undatus HOM05D004883 ORTHO05D005766 4.6e-31 137.9 107 62.6
HPP92_013338 Vanilla planifolia HOM05D004883 ORTHO05D005766 2.3e-30 135.6 105 67.6
Potri.002G126200 Populus trichocarpa HOM05D004883 ORTHO05D005766 6.7e-30 134.0 106 61.3
CSS0006435 Camellia sinensis var. sinensis HOM05D004883 ORTHO05D005766 1.7e-28 129.4 106 62.3
MBI06_g02552_MAGBIO Magnolia biondii HOM05D004883 ORTHO05D005766 1.7e-28 129.4 106 67.0
Potri.014G029300 Populus trichocarpa HOM05D004883 ORTHO05D005766 1.4e-27 126.3 106 60.4
Sabra14G0020100 Salix brachista HOM05D004883 ORTHO05D005766 2.4e-27 125.6 106 60.4
BolC9t59992H Brassica oleracea HOM05D004883 ORTHO05D005766 1.7e-25 119.4 90 71.1
Manes.18G037300 Manihot esculenta HOM05D004883 ORTHO05D005766 3.8e-25 118.2 106 57.5
MD00G1215600 Malus domestica HOM05D004883 ORTHO05D005766 5.0e-25 117.9 87 69.0
CANSAT35G0766 Cannabis sativa HOM05D004883 ORTHO05D005766 7.2e-24 114.0 103 50.5
Peaxi162Scf00252g00711 Petunia axillaris HOM05D004883 ORTHO05D005766 2.1e-23 112.5 101 58.4
TAR625G0321 Trochodendron aralioides HOM05D004883 ORTHO05D005766 2.7e-23 112.1 81 71.6
FAN15G1199 Fragaria x ananassa HOM05D004883 ORTHO05D005766 2.3e-22 109.0 79 67.1
EL10Ac4g09184 Beta vulgaris HOM05D004883 ORTHO05D005766 3.9e-22 108.2 95 56.8
BolC1t02723H Brassica oleracea HOM05D004883 ORTHO05D005766 1.5e-21 106.3 64 84.4
CAN.G371.3 Capsicum annuum HOM05D004883 ORTHO05D005766 4.4e-21 104.8 101 56.4
Nn5g30317 Nelumbo nucifera HOM05D004883 ORTHO05D005766 5.7e-21 104.4 56 91.1
AagrBONN_evm.TU.Sc2ySwM_344.1976 Anthoceros agrestis HOM05D004883 ORTHO05D005766 1.4e-19 99.8 108 49.1
Actinidia29871 Actinidia chinensis HOM05D004883 ORTHO05D005766 1.8e-19 99.4 64 79.7
Lj4A58G20 Lonicera japonica HOM05D000983 ORTHO05D005766 1.4e-16 89.7 54 79.6
EL10Ac7g17187 Beta vulgaris HOM05D004883 ORTHO05D005766 3.2e-16 88.6 83 59.0
C01p27920 Brassica napus HOM05D004883 ORTHO05D005766 1.2e-15 86.7 93 58.1
CAN.G1139.16 Capsicum annuum HOM05D004883 ORTHO05D005766 2.1e-15 85.9 75 61.3
C09p72490 Brassica napus HOM05D004883 ORTHO05D005766 1.8e-14 82.8 40 97.5
Os01g0357200 Oryza sativa ssp. japonica HOM05D004883 ORTHO05D005766 3.9e-14 81.6 71 60.6
Gohir.A06G018633 Gossypium hirsutum HOM05D004883 ORTHO05D005766 8.8e-14 80.5 72 55.6
RcHm_v2.0_Chr5g0032801 Rosa chinensis HOM05D004883 ORTHO05D005766 2.6e-13 79.0 78 53.8
unitig_32.g11126 Utricularia gibba HOM05D004883 ORTHO05D005766 1.0e-09 67.0 46 65.2
PRCOL_00003255 Prasinoderma coloniale HOM05D004883 ORTHO05D005766 6.7e-06 54.3 91 36.3
CBR_g37451 Chara braunii HOM05D004883 ORTHO05D005766 8.8e-06 53.9 43 62.8


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