Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p38430 Brassica napus HOM05D006460 ORTHO05D008143 3.3e-264 914.4 448 100.0
BcaC01g06799 Brassica carinata HOM05D006460 ORTHO05D008143 3.4e-261 904.4 448 98.7
BolC3t16117H Brassica oleracea HOM05D006460 ORTHO05D008143 3.4e-261 904.4 448 98.7
A03p31440 Brassica napus HOM05D006460 ORTHO05D008143 2.9e-252 874.8 449 96.0
BraA03t12325Z Brassica rapa HOM05D006460 ORTHO05D008143 1.6e-247 859.0 450 94.4
BcaB01g02385 Brassica carinata HOM05D006460 ORTHO05D008143 3.4e-237 824.7 455 90.5
Sp6g01720 Schrenkiella parvula HOM05D006460 ORTHO05D008143 6.5e-228 793.9 459 86.9
Thhalv10028644m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 4.2e-227 791.2 461 86.1
Thhalv10028645m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 4.2e-227 791.2 461 86.1
AT4G01880 Arabidopsis thaliana HOM05D006460 ORTHO05D008143 3.3e-224 781.6 456 85.7
CARHR249840 Cardamine hirsuta HOM05D006460 ORTHO05D008143 1.2e-221 773.1 456 84.0
AL6G51420 Arabidopsis lyrata HOM05D006460 ORTHO05D008143 1.5e-221 772.7 460 85.2
Carub.0006s3536 Capsella rubella HOM05D006460 ORTHO05D008143 3.6e-218 761.5 445 85.2
Aa31LG5G1480 Aethionema arabicum HOM05D006460 ORTHO05D008143 9.4e-203 710.3 477 74.8
THA.LOC104801320 Tarenaya hassleriana HOM05D006460 ORTHO05D008143 8.3e-183 644.0 450 72.4
GSVIVG01028196001 Vitis vinifera HOM05D006460 ORTHO05D008143 5.4e-166 588.2 449 65.3
Gorai.001G146600 Gossypium raimondii HOM05D006460 ORTHO05D008143 2.0e-165 586.3 448 62.9
Gohir.D07G134900 Gossypium hirsutum HOM05D006460 ORTHO05D008143 3.5e-165 585.5 451 62.5
COL.COLO4_23162 Corchorus olitorius HOM05D006460 ORTHO05D008143 7.8e-165 584.3 452 62.8
TAR362G0080 Trochodendron aralioides HOM05D006460 ORTHO05D008143 1.9e-163 579.7 471 62.0
Prupe.3G004500 Prunus persica HOM05D006460 ORTHO05D008143 3.3e-163 578.9 461 62.7
Sc17g0000180 Simmondsia chinensis HOM05D006460 ORTHO05D008143 5.6e-163 578.2 460 63.5
Potri.002G189800 Populus trichocarpa HOM05D006460 ORTHO05D008143 9.5e-163 577.4 447 63.8
Haze_05122 Corylus avellana HOM05D006460 ORTHO05D008143 1.6e-162 576.6 448 63.2
Duzib138G1376 Durio zibethinus HOM05D006460 ORTHO05D008143 2.1e-162 576.2 452 62.2
Sabra02G0165800 Salix brachista HOM05D006460 ORTHO05D008143 2.1e-162 576.2 447 63.1
CAN.G100.27 Capsicum annuum HOM05D006460 ORTHO05D008143 3.6e-162 575.5 450 63.1
Atru.chr5.915 Acer truncatum HOM05D006460 ORTHO05D008143 1.4e-161 573.5 452 61.9
PGR083G0788 Punica granatum HOM05D006460 ORTHO05D008143 1.5e-160 570.1 459 61.4
QL12p034319 Quercus lobata HOM05D006460 ORTHO05D008143 5.8e-160 568.2 461 61.8
Lj1C11T12 Lonicera japonica HOM05D006460 ORTHO05D008143 9.8e-160 567.4 471 59.9
Oeu002575.1 Olea europaea HOM05D006460 ORTHO05D008143 9.8e-160 567.4 457 61.3
CiPaw.04G089700 Carya illinoinensis HOM05D006460 ORTHO05D008143 2.2e-159 566.2 448 61.8
Manes.05G010900 Manihot esculenta HOM05D006460 ORTHO05D008143 4.9e-159 565.1 446 61.9
Sed0027463 Sechium edule HOM05D006460 ORTHO05D008143 8.3e-159 564.3 444 61.3
Ciclev10001046m.g Citrus clementina HOM05D006460 ORTHO05D008143 1.1e-158 563.9 451 63.2
Cpa.g.sc543.2 Carica papaya HOM05D006460 ORTHO05D008143 1.4e-158 563.5 459 61.9
PGSC0003DMG400005211 Solanum tuberosum HOM05D006460 ORTHO05D008143 1.9e-158 563.1 453 61.8
FvH4_1g26500 Fragaria vesca HOM05D006460 ORTHO05D008143 2.4e-158 562.8 472 58.5
Solyc01g068050.3 Solanum lycopersicum HOM05D006460 ORTHO05D008143 2.4e-158 562.8 453 61.1
CANSAT56G1882 Cannabis sativa HOM05D006460 ORTHO05D008143 4.1e-158 562.0 472 60.4
FAN28G1427 Fragaria x ananassa HOM05D006460 ORTHO05D008143 4.1e-158 562.0 471 58.2
RcHm_v2.0_Chr3g0486571 Rosa chinensis HOM05D006460 ORTHO05D008143 5.4e-158 561.6 471 58.0
SalBow6G2760 Salvia bowleyana HOM05D006460 ORTHO05D008143 5.4e-158 561.6 454 60.6
Eucgr.H00886 Eucalyptus grandis HOM05D006460 ORTHO05D008143 9.2e-158 560.8 452 61.3
Migut.D00030 Erythranthe guttata HOM05D006460 ORTHO05D008143 4.6e-157 558.5 452 61.3
TWI14G0400 Tripterygium wilfordii HOM05D006460 ORTHO05D008143 6.0e-157 558.1 452 61.7
MD09G1293200 Malus domestica HOM05D006460 ORTHO05D008143 1.7e-156 556.6 457 59.5
Actinidia21358 Actinidia chinensis HOM05D006460 ORTHO05D008143 2.5e-155 552.7 469 58.8
Nn4g25417 Nelumbo nucifera HOM05D006460 ORTHO05D008143 4.3e-155 552.0 474 59.5
Glyma.07G170000 Glycine max HOM05D006460 ORTHO05D008143 1.6e-154 550.1 450 60.9
ClCG09G004700 Citrullus lanatus HOM05D006460 ORTHO05D008143 2.8e-154 549.3 462 59.1
VMungo1215G1636 Vigna mungo HOM05D006460 ORTHO05D008143 6.8e-153 544.7 451 59.6
Gohir.A07G130500 Gossypium hirsutum HOM05D006460 ORTHO05D008143 1.2e-152 543.9 449 59.7
DCAR_012316 Daucus carota HOM05D006460 ORTHO05D008143 3.4e-152 542.3 453 58.5
MSTRG.21724 Avicennia marina HOM05D006460 ORTHO05D008143 4.4e-152 542.0 455 60.2
Nitab4.5_0000222g0270 Nicotiana tabacum HOM05D006460 ORTHO05D008143 7.5e-152 541.2 475 57.7
Lj2g0013221 Lotus japonicus HOM05D006460 ORTHO05D008143 1.3e-151 540.4 459 59.0
Phvul.003G019300 Phaseolus vulgaris HOM05D006460 ORTHO05D008143 2.9e-151 539.3 452 60.0
CSS0037090 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 4.9e-151 538.5 479 55.5
Ca_12543_v3 Cicer arietinum L. HOM05D006460 ORTHO05D008143 6.4e-151 538.1 456 59.0
Lalb_Chr17g0338451 Lupinus albus HOM05D006460 ORTHO05D008143 2.4e-150 536.2 460 59.6
Cc01_g21920 Coffea canephora HOM05D006460 ORTHO05D008143 5.4e-150 535.0 457 58.9
SGA_v2.0_scaffold417G51258 Striga asiatica HOM05D006460 ORTHO05D008143 3.5e-149 532.3 467 58.0
Thecc.01G322200 Theobroma cacao HOM05D006460 ORTHO05D008143 1.7e-148 530.0 456 59.6
HanXRQChr13g0414441 Helianthus annuus HOM05D006460 ORTHO05D008143 2.3e-148 529.6 441 60.5
Lsat_1_v5_gn_8_167341 Lactuca sativa HOM05D006460 ORTHO05D008143 3.9e-148 528.9 436 60.3
Aqoxy5G02768 Aquilegia oxysepala HOM05D006460 ORTHO05D008143 5.1e-148 528.5 463 56.4
Medtr1g032120 Medicago truncatula HOM05D006460 ORTHO05D008143 4.3e-147 525.4 460 57.6
AUR62024570 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.1e-145 520.8 440 58.2
PSO357G0369 Papaver somniferum HOM05D006460 ORTHO05D008143 3.1e-145 519.2 455 58.0
Psat6g046360 Pisum sativum HOM05D006460 ORTHO05D008143 4.0e-145 518.8 457 57.5
AUR62011736 Chenopodium quinoa HOM05D006460 ORTHO05D008143 8.9e-145 517.7 440 58.2
TPR.G36866 Trifolium pratense HOM05D006460 ORTHO05D008143 3.8e-143 512.3 495 53.7
vmacro02372 Vaccinium macrocarpon HOM05D006460 ORTHO05D008143 3.8e-143 512.3 518 51.9
arahy.Tifrunner.gnm1.ann1.N25L3F Arachis hypogaea HOM05D006460 ORTHO05D008143 1.9e-142 510.0 480 54.6
FAN19G0891 Fragaria x ananassa HOM05D006460 ORTHO05D008143 1.2e-141 507.3 472 55.1
FAN26G0500 Fragaria x ananassa HOM05D006460 ORTHO05D008143 3.5e-141 505.8 472 54.9
arahy.Tifrunner.gnm1.ann1.R72PZK Arachis hypogaea HOM05D006460 ORTHO05D008143 2.3e-140 503.1 487 53.8
CDE08G1018 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 2.3e-140 503.1 462 54.5
Cfa004883 Carpinus fangiana HOM05D006460 ORTHO05D008143 4.3e-139 498.8 407 61.9
ATR0796G118 Amborella trichopoda HOM05D006460 ORTHO05D008143 4.7e-138 495.4 484 51.4
Rhsim13G0001100 Rhododendron simsii HOM05D006460 ORTHO05D008143 9.0e-137 491.1 414 60.4
Hund09677 Selenicereus undatus HOM05D006460 ORTHO05D008143 9.0e-137 491.1 458 55.5
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 2.1e-133 479.9 407 58.2
EL10As5g23582 Beta vulgaris HOM05D006460 ORTHO05D008143 2.0e-128 463.4 470 52.6
Nitab4.5_0002994g0020 Nicotiana tabacum HOM05D006460 ORTHO05D008143 2.2e-127 459.9 468 51.5
PSO170G6216 Papaver somniferum HOM05D006460 ORTHO05D008143 4.2e-126 455.7 383 58.7
MELO3C023610.2 Cucumis melo HOM05D006460 ORTHO05D008143 3.5e-125 452.6 437 52.6
PSO384G3244 Papaver somniferum HOM05D006460 ORTHO05D008143 7.9e-125 451.4 367 60.2
HPP92_010877 Vanilla planifolia HOM05D000746 ORTHO05D000573 2.1e-122 443.4 438 49.8
Eucgr.L00887 Eucalyptus grandis HOM05D006460 ORTHO05D008143 1.4e-118 430.6 346 61.3
CSS0008981 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 1.9e-118 430.3 371 57.1
CsaV3_7G030430 Cucumis sativus L. HOM05D006460 ORTHO05D008143 6.7e-116 421.8 353 59.8
Dinv33158 Davidia involucrata HOM05D001974 ORTHO05D001995 6.7e-116 421.8 337 60.5
Ah.11g045760 Amaranthus hybridus HOM05D006460 ORTHO05D008143 5.6e-115 418.7 441 49.9
Zm00001eb211340 Zea mays HOM05D006460 ORTHO05D008143 9.3e-110 401.4 360 53.1
AagrBONN_evm.TU.Sc2ySwM_228.322 Anthoceros agrestis HOM05D006460 ORTHO05D008143 2.1e-109 400.2 454 46.7
AagrBONN_evm.TU.Sc2ySwM_344.3324 Anthoceros agrestis HOM05D006460 ORTHO05D008143 9.7e-107 391.3 454 46.0
Pp3c21_16200 Physcomitrium patens HOM05D006460 ORTHO05D008143 2.0e-104 383.6 513 40.5
Mapoly0095s0050 Marchantia polymorpha HOM05D006460 ORTHO05D008143 3.2e-102 376.3 489 41.9
Peaxi162Scf00919g00047 Petunia axillaris HOM05D006460 ORTHO05D008143 9.1e-97 358.2 343 54.5
Sopen01g029980 Solanum pennellii HOM05D006460 ORTHO05D008143 7.7e-96 355.1 293 60.8
SMO010G0007 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 3.2e-94 349.7 445 40.7
MBI18_g28900_MAGBIO Magnolia biondii HOM05D006460 ORTHO05D008143 1.2e-77 294.7 432 41.7
unitig_578.g16638 Utricularia gibba HOM05D006460 ORTHO05D008143 1.0e-76 291.6 441 39.2
Os03g0833200 Oryza sativa ssp. japonica HOM05D006460 ORTHO05D008143 8.0e-61 238.8 237 51.5
MCO13G012 Micromonas commoda HOM05D006460 ORTHO05D008143 4.9e-50 203.0 469 29.2
SMO339G0034 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 1.1e-44 185.3 231 41.6
SEGI_40178 Sequoiadendron giganteum HOM05D006460 ORTHO05D008143 1.4e-44 184.9 278 37.1
PRCOL_00001885 Prasinoderma coloniale HOM05D006460 ORTHO05D008143 1.9e-41 174.5 469 29.0
AUR62036055 Chenopodium quinoa HOM05D006460 ORTHO05D008143 3.0e-39 167.2 149 57.0
AUR62029044 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.9e-38 164.5 149 57.7
MD17G1281000 Malus domestica HOM05D006460 ORTHO05D008143 7.3e-38 162.5 228 42.1
AagrBONN_evm.TU.Sc2ySwM_228.45 Anthoceros agrestis HOM05D006460 ORTHO05D008143 1.7e-23 114.8 212 37.3
CBR_g49426 Chara braunii HOM05D006460 ORTHO05D008143 2.5e-22 110.9 107 51.4
Cre16.g654992 Chlamydomonas reinhardtii HOM05D006460 ORTHO05D008143 1.1e-17 95.5 804 19.7
RcHm_v2.0_Chr7g0232271 Rosa chinensis HOM05D006460 ORTHO05D008143 1.7e-15 88.2 49 81.6
QL04p085746 Quercus lobata HOM05D006460 ORTHO05D008143 3.9e-15 87.0 106 49.1
AUR62007801 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.3e-13 82.0 69 58.0
Hund09679 Selenicereus undatus HOM05D006460 ORTHO05D008143 3.4e-11 73.9 63 47.6
QL05p033637 Quercus lobata HOM05D000101 ORTHO05D000089 4.6e-08 63.5 70 48.6
AUR62043166 Chenopodium quinoa HOM05D006460 ORTHO05D008143 6.0e-08 63.2 64 53.1
CDE02G3709 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 1.3e-07 62.0 48 52.1


User provided reference genes

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