Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p37690 Brassica napus HOM05D000921 ORTHO05D015533 5.1e-97 357.8 192 100.0
BolC3t16058H Brassica oleracea HOM05D000921 ORTHO05D015533 5.1e-97 357.8 192 100.0
BraA03t12270Z Brassica rapa HOM05D000921 ORTHO05D015533 1.7e-84 316.2 180 93.3
A03p30910 Brassica napus HOM05D000921 ORTHO05D015533 6.4e-84 314.3 180 92.8
BcaC01g06740 Brassica carinata HOM05D000921 ORTHO05D004153 1.6e-82 309.7 177 93.8
BcaB01g02482 Brassica carinata HOM05D000921 ORTHO05D004153 1.3e-76 290.0 177 89.8
Sp6g02580 Schrenkiella parvula HOM05D000921 ORTHO05D004153 2.3e-65 252.7 180 76.1
AT4G02660 Arabidopsis thaliana HOM05D000921 ORTHO05D004153 1.1e-59 233.8 183 69.4
AL6G50380 Arabidopsis lyrata HOM05D000921 ORTHO05D004153 7.4e-56 221.1 192 65.1
Carub.0006s3446 Capsella rubella HOM05D000921 ORTHO05D004153 7.4e-56 221.1 184 67.4
AL1G12520 Arabidopsis lyrata HOM05D000921 ORTHO05D004153 2.4e-54 216.1 180 66.7
C05p01680 Brassica napus HOM05D000921 ORTHO05D004153 2.6e-53 212.6 176 65.9
BolC5t28947H Brassica oleracea HOM05D000921 ORTHO05D004153 2.6e-53 212.6 176 65.9
CARHR250960 Cardamine hirsuta HOM05D000921 ORTHO05D004153 4.5e-53 211.8 196 62.8
Thhalv10006519m.g Eutrema salsugineum HOM05D000921 ORTHO05D004153 5.9e-53 211.5 180 66.1
Aa31LG1G9470 Aethionema arabicum HOM05D000921 ORTHO05D004153 1.0e-52 210.7 180 67.2
BraA10t42445Z Brassica rapa HOM05D000921 ORTHO05D004153 1.7e-52 209.9 179 64.8
BcaB03g15744 Brassica carinata HOM05D000921 ORTHO05D004153 5.0e-52 208.4 179 65.9
Sp1g02060 Schrenkiella parvula HOM05D000921 ORTHO05D004153 5.0e-52 208.4 181 66.9
A10p01690 Brassica napus HOM05D000921 ORTHO05D004153 1.1e-51 207.2 179 64.8
THA.LOC104825985 Tarenaya hassleriana HOM05D000921 ORTHO05D004153 1.4e-51 206.8 180 65.6
BcaC07g42269 Brassica carinata HOM05D000921 ORTHO05D004153 1.9e-51 206.5 181 64.1
BolC8t52810H Brassica oleracea HOM05D000921 ORTHO05D004153 1.9e-51 206.5 177 63.3
Carub.0001s0220 Capsella rubella HOM05D000921 ORTHO05D004153 1.9e-51 206.5 177 64.4
BraA09t42173Z Brassica rapa HOM05D000921 ORTHO05D004153 3.2e-51 205.7 177 63.3
C08p52940 Brassica napus HOM05D000921 ORTHO05D004153 5.5e-51 204.9 177 63.3
A09p68370 Brassica napus HOM05D000921 ORTHO05D004153 7.2e-51 204.5 180 63.9
CARHR002410 Cardamine hirsuta HOM05D000921 ORTHO05D004153 9.4e-51 204.1 181 65.2
Atru.chr5.1523 Acer truncatum HOM05D000921 ORTHO05D004153 5.7e-48 194.9 178 60.7
Sabra02G0038900 Salix brachista HOM05D000921 ORTHO05D004153 9.7e-48 194.1 177 59.3
RcHm_v2.0_Chr6g0289881 Rosa chinensis HOM05D000921 ORTHO05D004153 1.7e-47 193.4 181 60.2
VMungo0720G2500 Vigna mungo HOM05D000921 ORTHO05D015533 2.8e-47 192.6 177 59.9
Actinidia19962 Actinidia chinensis HOM05D000921 ORTHO05D004153 3.7e-47 192.2 178 59.6
Cfa006203 Carpinus fangiana HOM05D000921 ORTHO05D004153 4.8e-47 191.8 177 58.2
FAN20G3205 Fragaria x ananassa HOM05D000921 ORTHO05D004153 1.1e-46 190.7 181 58.6
Nitab4.5_0000459g0090 Nicotiana tabacum HOM05D000921 ORTHO05D004153 1.1e-46 190.7 176 60.8
Eucgr.K03323 Eucalyptus grandis HOM05D000921 ORTHO05D004153 2.4e-46 189.5 177 59.9
PGR044G0864 Punica granatum HOM05D000921 ORTHO05D004153 2.4e-46 189.5 182 59.3
Thecc.01G271200 Theobroma cacao HOM05D000921 ORTHO05D004153 2.4e-46 189.5 181 59.7
ECA248G3113 Erigeron canadensis HOM05D000921 ORTHO05D004153 3.1e-46 189.1 186 57.5
FAN15G1223 Fragaria x ananassa HOM05D000921 ORTHO05D004153 3.1e-46 189.1 181 58.0
Gohir.D11G131000 Gossypium hirsutum HOM05D000921 ORTHO05D004153 4.1e-46 188.7 177 59.3
GSVIVG01003123001 Vitis vinifera HOM05D000921 ORTHO05D004153 4.1e-46 188.7 177 59.9
Cc01_g18990 Coffea canephora HOM05D000921 ORTHO05D004153 7.0e-46 188.0 177 57.1
Lalb_Chr06g0162771 Lupinus albus HOM05D000921 ORTHO05D004153 7.0e-46 188.0 177 58.2
Solyc09g065700.3 Solanum lycopersicum HOM05D000921 ORTHO05D004153 7.0e-46 188.0 177 59.9
Sopen09g027450 Solanum pennellii HOM05D000921 ORTHO05D004153 7.0e-46 188.0 177 59.9
AT1G03060 Arabidopsis thaliana HOM05D000921 ORTHO05D004153 1.2e-45 187.2 178 60.7
CiPaw.07G086700 Carya illinoinensis HOM05D000921 ORTHO05D004153 1.2e-45 187.2 177 57.6
Potri.002G047700 Populus trichocarpa HOM05D000921 ORTHO05D004153 1.2e-45 187.2 182 57.7
Sed0015319 Sechium edule HOM05D000921 ORTHO05D004153 2.0e-45 186.4 180 58.9
arahy.Tifrunner.gnm1.ann1.0T0464 Arachis hypogaea HOM05D000921 ORTHO05D004153 2.6e-45 186.0 184 56.5
Glyma.10G030000 Glycine max HOM05D000921 ORTHO05D004153 2.6e-45 186.0 177 58.8
FvH4_2g22920 Fragaria vesca HOM05D000921 ORTHO05D004153 3.4e-45 185.7 177 57.6
FAN24G0847 Fragaria x ananassa HOM05D000921 ORTHO05D004153 3.4e-45 185.7 177 57.6
HanXRQChr01g0005671 Helianthus annuus HOM05D000921 ORTHO05D004153 3.4e-45 185.7 177 57.6
Sabra05G0164600 Salix brachista HOM05D000921 ORTHO05D004153 3.4e-45 185.7 186 57.5
COL.COLO4_09186 Corchorus olitorius HOM05D000921 ORTHO05D004153 5.9e-45 184.9 177 59.3
FAN27G1722 Fragaria x ananassa HOM05D000921 ORTHO05D004153 5.9e-45 184.9 189 56.1
Gorai.007G140000 Gossypium raimondii HOM05D000921 ORTHO05D004153 5.9e-45 184.9 177 58.8
Peaxi162Scf00259g00414 Petunia axillaris HOM05D000921 ORTHO05D004153 7.7e-45 184.5 186 58.6
Potri.005G215400 Populus trichocarpa HOM05D000921 ORTHO05D004153 7.7e-45 184.5 186 57.0
CAN.G1072.6 Capsicum annuum HOM05D000921 ORTHO05D004153 1.0e-44 184.1 177 58.8
TAR633G0413 Trochodendron aralioides HOM05D000921 ORTHO05D004153 1.0e-44 184.1 179 59.8
CsaV3_7G027700 Cucumis sativus L. HOM05D000921 ORTHO05D004153 1.3e-44 183.7 186 57.5
TWI12G1077 Tripterygium wilfordii HOM05D000921 ORTHO05D004153 2.2e-44 183.0 182 55.5
TWI18G0154 Tripterygium wilfordii HOM05D000921 ORTHO05D004153 2.2e-44 183.0 177 57.1
MELO3C015783.2 Cucumis melo HOM05D000921 ORTHO05D004153 2.9e-44 182.6 186 57.5
Gohir.A11G125600 Gossypium hirsutum HOM05D000921 ORTHO05D004153 3.8e-44 182.2 177 58.2
Dinv22500 Davidia involucrata HOM05D000921 ORTHO05D004153 6.5e-44 181.4 177 55.9
Phvul.007G175300 Phaseolus vulgaris HOM05D000921 ORTHO05D004153 6.5e-44 181.4 177 57.6
Glyma.02G144200 Glycine max HOM05D000921 ORTHO05D004153 1.1e-43 180.6 183 57.9
Dinv32883 Davidia involucrata HOM05D000921 ORTHO05D004153 1.4e-43 180.3 177 57.6
Duzib133G0456 Durio zibethinus HOM05D000921 ORTHO05D004153 1.4e-43 180.3 175 57.7
Prupe.8G234500 Prunus persica HOM05D000921 ORTHO05D004153 2.5e-43 179.5 177 58.2
QL12p042334 Quercus lobata HOM05D000921 ORTHO05D004153 2.5e-43 179.5 182 55.5
Duzib138G1896 Durio zibethinus HOM05D000921 ORTHO05D004153 3.2e-43 179.1 181 56.9
Aqoxy5G00390 Aquilegia oxysepala HOM05D000921 ORTHO05D004153 4.2e-43 178.7 178 57.9
Lj5g0027434 Lotus japonicus HOM05D000921 ORTHO05D004153 4.2e-43 178.7 177 54.8
CANSAT25G1208 Cannabis sativa HOM05D000921 ORTHO05D004153 7.2e-43 177.9 186 56.5
Sc17g0001160 Simmondsia chinensis HOM05D000921 ORTHO05D004153 7.2e-43 177.9 177 55.4
Psat6g058840 Pisum sativum HOM05D000921 ORTHO05D004153 1.2e-42 177.2 177 57.1
Lsat_1_v5_gn_8_93941 Lactuca sativa HOM05D000921 ORTHO05D004153 2.1e-42 176.4 177 55.4
Medtr1g071260 Medicago truncatula HOM05D000921 ORTHO05D004153 2.1e-42 176.4 177 53.7
MSTRG.21525 Avicennia marina HOM05D000921 ORTHO05D004153 4.7e-42 175.3 178 55.6
Manes.01G203800 Manihot esculenta HOM05D000921 ORTHO05D004153 4.7e-42 175.3 177 54.2
Migut.D00355 Erythranthe guttata HOM05D000921 ORTHO05D004153 8.0e-42 174.5 185 55.7
Nn6g33594 Nelumbo nucifera HOM05D000921 ORTHO05D004153 1.0e-41 174.1 180 56.7
Gorai.004G217600 Gossypium raimondii HOM05D000921 ORTHO05D004153 1.4e-41 173.7 183 55.7
Sc05g0001320 Simmondsia chinensis HOM05D000921 ORTHO05D004153 1.4e-41 173.7 177 55.4
MD03G1257800 Malus domestica HOM05D000921 ORTHO05D004153 3.0e-41 172.6 177 57.1
Gohir.D08G205600 Gossypium hirsutum HOM05D000921 ORTHO05D004153 3.9e-41 172.2 183 55.7
Nn1g00513 Nelumbo nucifera HOM05D000921 ORTHO05D004153 3.9e-41 172.2 183 55.7
PSO210G1924 Papaver somniferum HOM05D000921 ORTHO05D004153 6.7e-41 171.4 118 73.7
Nitab4.5_0003424g0020 Nicotiana tabacum HOM05D000921 ORTHO05D004153 1.1e-40 170.6 158 60.8
TPR.G34892 Trifolium pratense HOM05D000921 ORTHO05D004153 1.5e-40 170.2 179 53.6
vmacro02613 Vaccinium macrocarpon HOM05D000921 ORTHO05D004153 2.6e-40 169.5 118 71.2
ClCG09G007420 Citrullus lanatus HOM05D000921 ORTHO05D004153 3.3e-40 169.1 221 48.4
Lsat_1_v5_gn_5_185441 Lactuca sativa HOM05D000921 ORTHO05D004153 4.4e-40 168.7 186 52.2
CSS0032745 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004153 5.7e-40 168.3 183 53.6
CSS0010203 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004153 7.4e-40 167.9 177 54.2
CSS0042369 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004153 7.4e-40 167.9 177 54.2
Rhsim13G0028700 Rhododendron simsii HOM05D000921 ORTHO05D004153 7.4e-40 167.9 132 64.4
MD11G1278500 Malus domestica HOM05D000921 ORTHO05D004153 9.7e-40 167.5 176 54.0
Cpa.g.sc52.120 Carica papaya HOM05D000921 ORTHO05D004153 1.7e-39 166.8 158 58.9
Ca_09726_v3 Cicer arietinum L. HOM05D000921 ORTHO05D004153 6.3e-39 164.9 178 52.2
Gorai.004G056400 Gossypium raimondii HOM05D000921 ORTHO05D004153 1.1e-38 164.1 177 54.8
Hund02865 Selenicereus undatus HOM05D000921 ORTHO05D004153 4.1e-38 162.2 177 52.0
SGA_v2.0_scaffold1G00535 Striga asiatica HOM05D000921 ORTHO05D004153 5.3e-38 161.8 158 55.7
Oeu002265.1 Olea europaea HOM05D000921 ORTHO05D004153 1.6e-37 160.2 117 67.5
HPP92_021305 Vanilla planifolia HOM05D000921 ORTHO05D004153 1.6e-37 160.2 185 49.7
HanXRQChr06g0177821 Helianthus annuus HOM05D000921 ORTHO05D004153 1.3e-36 157.1 178 51.1
Lj2C1164G7 Lonicera japonica HOM05D000921 ORTHO05D004153 1.3e-36 157.1 115 66.1
EL10Ac5g10491 Beta vulgaris HOM05D000921 ORTHO05D004153 8.5e-36 154.5 193 50.8
Lalb_Chr01g0019981 Lupinus albus HOM05D000921 ORTHO05D004153 1.1e-35 154.1 187 48.7
SalBow4G3326 Salvia bowleyana HOM05D000921 ORTHO05D004153 4.2e-35 152.1 117 64.1
SHI10018 Sapria himalayana HOM05D000921 ORTHO05D004153 2.7e-34 149.4 189 47.1
ATR0665G073 Amborella trichopoda HOM05D000921 ORTHO05D004153 2.3e-33 146.4 177 49.7
arahy.Tifrunner.gnm1.ann1.EGZY1N Arachis hypogaea HOM05D000921 ORTHO05D004153 2.3e-33 146.4 177 47.5
arahy.Tifrunner.gnm1.ann1.IAH9UB Arachis hypogaea HOM05D000921 ORTHO05D004153 2.3e-33 146.4 177 47.5
Os03g0744675 Oryza sativa ssp. japonica HOM05D000921 ORTHO05D004153 4.4e-32 142.1 120 63.3
unitig_61.g26265 Utricularia gibba HOM05D000921 ORTHO05D004153 5.7e-32 141.7 158 50.6
PSO461G0055 Papaver somniferum HOM05D000921 ORTHO05D004153 2.2e-31 139.8 178 49.4
AUR62032282 Chenopodium quinoa HOM05D000921 ORTHO05D004153 2.8e-31 139.4 116 60.3
Zm00001eb056940 Zea mays HOM05D000921 ORTHO05D004153 1.3e-28 130.6 153 51.6
HanXRQChr04g0113931 Helianthus annuus HOM05D000921 ORTHO05D004153 2.9e-28 129.4 98 65.3
Ah.11g050210 Amaranthus hybridus HOM05D000921 ORTHO05D004153 3.8e-28 129.0 181 47.0
ECA236G3737 Erigeron canadensis HOM05D000921 ORTHO05D004153 4.7e-26 122.1 157 45.9
SEGI_07899 Sequoiadendron giganteum HOM05D000921 ORTHO05D015533 5.2e-25 118.6 116 53.4
AUR62011970 Chenopodium quinoa HOM05D000921 ORTHO05D004153 2.8e-23 112.8 177 43.5
Ciclev10018426m.g Citrus clementina HOM05D000921 ORTHO05D004153 7.7e-21 104.8 65 80.0
Mapoly0082s0083 Marchantia polymorpha HOM05D000921 ORTHO05D004153 2.1e-18 96.7 129 45.0
DCAR_002700 Daucus carota HOM05D000921 ORTHO05D004153 3.0e-17 92.8 64 70.3
CDE10G0697 Ceratophyllum demersum HOM05D000921 ORTHO05D004153 3.4e-16 89.4 91 54.9
Pp3c6_26100 Physcomitrium patens HOM05D000921 ORTHO05D004153 7.5e-16 88.2 117 44.4
CDE04G0357 Ceratophyllum demersum HOM05D000921 ORTHO05D004153 3.7e-15 85.9 177 36.2
Haze_04641 Corylus avellana HOM05D000921 ORTHO05D004153 7.0e-14 81.6 158 39.9
Pp3c5_2890 Physcomitrium patens HOM05D000921 ORTHO05D004153 9.2e-14 81.3 143 39.9
Pp3c5_2897 Physcomitrium patens HOM05D000921 ORTHO05D004153 9.2e-14 81.3 143 39.9
Lj1C56G7 Lonicera japonica HOM05D000921 ORTHO05D004153 1.2e-13 80.9 117 40.2
Gohir.A08G045250 Gossypium hirsutum HOM05D000921 ORTHO05D015533 4.5e-13 79.0 112 46.4
Pp3c6_5700 Physcomitrium patens HOM05D000921 ORTHO05D004153 5.0e-12 75.5 120 38.3
Pp3c6_5706 Physcomitrium patens HOM05D000921 ORTHO05D004153 5.0e-12 75.5 120 38.3
Gohir.D08G055560 Gossypium hirsutum HOM05D000921 ORTHO05D015533 6.6e-12 75.1 112 44.6
SMO236G0048 Selaginella moellendorffii HOM05D000921 ORTHO05D004153 6.6e-12 75.1 110 37.3
Pp3c16_11700 Physcomitrium patens HOM05D000921 ORTHO05D004153 4.3e-11 72.4 153 35.3
Pp3c16_11705 Physcomitrium patens HOM05D000921 ORTHO05D004153 4.3e-11 72.4 153 35.3
HanXRQChr02g0052171 Helianthus annuus HOM05D000921 ORTHO05D015533 8.9e-09 64.7 60 56.7
Hund09551 Selenicereus undatus HOM05D000921 ORTHO05D004153 8.9e-09 64.7 49 71.4
Lsat_1_v5_gn_1_73041 Lactuca sativa HOM05D002056 ORTHO05D036458 5.4e-06 55.5 52 57.7
Gorai.012G075400 Gossypium raimondii HOM05D000921 ORTHO05D015533 9.2e-06 54.7 52 50.0


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