Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p31470 Brassica napus HOM05D001038 ORTHO05D010946 1.1e-251 872.8 432 100.0
BolC3t15494H Brassica oleracea HOM05D001038 ORTHO05D010946 3.5e-239 831.2 470 90.2
BcaC01g04978 Brassica carinata HOM05D001038 ORTHO05D010946 4.6e-114 415.6 207 98.1
BcaC08g45228 Brassica carinata HOM05D001038 ORTHO05D010946 1.5e-93 347.4 471 44.8
BcaC01g04979 Brassica carinata HOM05D001038 ORTHO05D010946 3.1e-86 323.2 258 70.5
BcaC03g14544 Brassica carinata HOM05D001038 ORTHO05D010946 3.2e-83 313.2 334 48.8
C06p00840 Brassica napus HOM05D001038 ORTHO05D010946 5.5e-83 312.4 306 51.6
BcaB08g34843 Brassica carinata HOM05D001038 ORTHO05D010946 4.4e-80 302.8 485 38.8
BcaC01g03929 Brassica carinata HOM05D001038 ORTHO05D010946 7.2e-75 285.4 334 45.8
BolC2t08169H Brassica oleracea HOM05D001038 ORTHO05D010946 2.5e-59 233.8 262 46.6
A04p08430 Brassica napus HOM05D001038 ORTHO05D010946 1.4e-49 201.4 207 51.2
BolC3t20322H Brassica oleracea HOM05D001038 ORTHO05D010946 1.2e-48 198.4 193 50.8
C05p34670 Brassica napus HOM05D001038 ORTHO05D032287 7.8e-45 185.7 335 35.5
C05p38700 Brassica napus HOM05D037879 ORTHO05D027353 4.1e-38 163.3 329 29.5
Thhalv10023964m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 7.8e-37 159.1 343 31.5
BcaB01g02361 Brassica carinata HOM05D001038 ORTHO05D010946 1.6e-34 151.4 313 35.1
Thhalv10003372m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.4e-33 148.3 338 28.1
BolC2t07874H Brassica oleracea HOM05D001038 ORTHO05D010946 1.8e-33 147.9 279 34.4
BolC5t31712H Brassica oleracea HOM05D001038 ORTHO05D032287 1.2e-32 145.2 322 32.6
BcaB08g36238 Brassica carinata HOM05D011654 ORTHO05D010946 1.7e-31 141.4 339 30.1
BcaB06g28199 Brassica carinata HOM05D001038 ORTHO05D010946 6.4e-31 139.4 351 29.3
C09p31530 Brassica napus HOM05D020314 ORTHO05D032005 1.4e-30 138.3 340 29.1
BcaB01g02416 Brassica carinata HOM05D011654 ORTHO05D010946 2.4e-30 137.5 336 29.2
Thhalv10003408m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 2.4e-30 137.5 219 33.8
Thhalv10009967m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.6e-29 134.8 206 33.5
Thhalv10002771m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 4.6e-29 133.3 293 29.4
BcaB01g01507 Brassica carinata HOM05D011654 ORTHO05D010946 3.0e-28 130.6 298 29.5
Thhalv10002173m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.1e-27 128.6 308 28.2
BraA04t16531Z Brassica rapa HOM05D001038 ORTHO05D010946 1.9e-27 127.9 207 39.1
C04p20500 Brassica napus HOM05D001038 ORTHO05D010946 5.6e-27 126.3 207 38.6
BolC4t23575H Brassica oleracea HOM05D001038 ORTHO05D010946 5.6e-27 126.3 207 38.6
Thhalv10029129m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 7.3e-27 125.9 452 23.0
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 3.6e-26 123.6 333 29.7
Thhalv10002975m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 6.2e-26 122.9 327 29.1
BolC9t55839H Brassica oleracea HOM05D001038 ORTHO05D016703 1.1e-25 122.1 333 27.9
BolC3t14874H Brassica oleracea HOM05D001038 ORTHO05D010763 6.8e-25 119.4 145 41.4
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 1.2e-24 118.6 333 27.0
Thhalv10023140m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 7.6e-24 115.9 285 26.3
BcaB03g16260 Brassica carinata HOM05D001038 ORTHO05D019962 2.9e-23 114.0 324 27.5
C07p60310 Brassica napus HOM05D001038 ORTHO05D000395 1.9e-22 111.3 105 61.9
C02p52080 Brassica napus HOM05D001038 ORTHO05D019962 4.1e-22 110.2 328 25.9
C09p42070 Brassica napus HOM05D001038 ORTHO05D021947 4.1e-22 110.2 336 26.5
BolC2t11293H Brassica oleracea HOM05D001038 ORTHO05D019962 4.1e-22 110.2 328 25.9
BcaB06g28161 Brassica carinata HOM05D001038 ORTHO05D000395 9.2e-22 109.0 335 25.7
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-21 108.6 336 28.6
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 1.2e-21 108.6 340 26.2
BolC7t41626H Brassica oleracea HOM05D001038 ORTHO05D014932 2.7e-21 107.5 337 24.6
BcaC05g26744 Brassica carinata HOM05D001038 ORTHO05D000395 3.5e-21 107.1 315 23.8
A10p08770 Brassica napus HOM05D001038 ORTHO05D016776 7.8e-21 105.9 297 26.9
C05p48930 Brassica napus HOM05D001038 ORTHO05D016716 7.8e-21 105.9 309 29.1
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 7.8e-21 105.9 309 29.1
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-20 105.5 439 25.5
BcaB06g25472 Brassica carinata HOM05D001038 ORTHO05D010763 1.0e-20 105.5 312 26.3
BraA06t25412Z Brassica rapa HOM05D001038 ORTHO05D017560 1.0e-20 105.5 334 25.4
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 1.7e-20 104.8 272 27.9
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 2.3e-20 104.4 336 24.4
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 2.3e-20 104.4 209 31.1
C06p10570 Brassica napus HOM05D001038 ORTHO05D014932 5.1e-20 103.2 340 25.3
BcaB02g06555 Brassica carinata HOM05D001038 ORTHO05D010763 1.1e-19 102.1 276 26.4
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-19 102.1 325 26.2
BcaB05g22891 Brassica carinata HOM05D001038 ORTHO05D010763 1.5e-19 101.7 321 27.1
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 1.9e-19 101.3 336 26.8
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 2.5e-19 100.9 326 24.2
BolC7t40492H Brassica oleracea HOM05D001038 ORTHO05D010763 4.3e-19 100.1 309 26.5
BolC2t11347H Brassica oleracea HOM05D001038 ORTHO05D000395 2.1e-18 97.8 152 34.9
BolC7t41684H Brassica oleracea HOM05D001038 ORTHO05D010763 2.1e-18 97.8 322 25.2
BcaB07g33328 Brassica carinata HOM05D001038 ORTHO05D010763 4.7e-18 96.7 338 25.7
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 4.7e-18 96.7 260 30.4
Carub.0004s1123 Capsella rubella HOM05D001038 ORTHO05D000395 4.7e-18 96.7 283 25.1
C04p58380 Brassica napus HOM05D001038 ORTHO05D010763 1.1e-17 95.5 180 32.2
BcaNung01360 Brassica carinata HOM05D001038 ORTHO05D010763 1.4e-17 95.1 335 25.1
C05p37200 Brassica napus HOM05D001038 ORTHO05D017560 1.8e-17 94.7 339 25.1
BcaB05g25087 Brassica carinata HOM05D001038 ORTHO05D000395 2.4e-17 94.4 341 24.9
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 2.4e-17 94.4 315 24.4
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 4.0e-17 93.6 313 28.1
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 5.2e-17 93.2 308 23.4
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 2.0e-16 91.3 336 23.2
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 9.9e-16 89.0 320 25.6
BcaB06g26737 Brassica carinata HOM05D001038 ORTHO05D010763 1.7e-15 88.2 199 26.6
A09p34780 Brassica napus HOM05D001038 ORTHO05D000395 1.7e-15 88.2 335 26.0
BolC6t36138H Brassica oleracea HOM05D001038 ORTHO05D014932 2.9e-15 87.4 308 24.7
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 3.8e-15 87.0 263 25.5
BcaC06g35484 Brassica carinata HOM05D001038 ORTHO05D000395 7.1e-14 82.8 335 23.6
Carub.0013s0014 Capsella rubella HOM05D001038 ORTHO05D000395 7.1e-14 82.8 260 25.8
C02p45450 Brassica napus HOM05D001038 ORTHO05D017560 1.6e-13 81.6 200 25.0
BcaC08g47005 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-13 81.3 123 33.3
BcaB07g30174 Brassica carinata HOM05D001038 ORTHO05D000395 3.5e-13 80.5 125 33.6
Thhalv10015447m.g Eutrema salsugineum HOM05D001038 ORTHO05D010763 1.3e-12 78.6 189 24.9
BolC7t43636H Brassica oleracea HOM05D001038 ORTHO05D000395 1.7e-12 78.2 242 23.6
C07p09720 Brassica napus HOM05D001038 ORTHO05D010763 3.0e-12 77.4 331 21.8
BcaB03g16464 Brassica carinata HOM05D001038 ORTHO05D018589 3.9e-12 77.0 134 32.8
BcaB06g26982 Brassica carinata HOM05D001038 ORTHO05D000395 3.9e-12 77.0 306 23.2
C07p30940 Brassica napus HOM05D001038 ORTHO05D014932 3.9e-12 77.0 240 24.2
Thhalv10029131m.g Eutrema salsugineum HOM05D001038 ORTHO05D010763 6.6e-12 76.3 162 30.2
C09p39680 Brassica napus HOM05D001038 ORTHO05D010763 1.1e-11 75.5 278 22.7
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 1.5e-11 75.1 134 32.1
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 2.5e-11 74.3 277 23.5
BcaB02g10814 Brassica carinata HOM05D001038 ORTHO05D010946 4.3e-11 73.6 318 24.2
BolC5t32344H Brassica oleracea HOM05D001038 ORTHO05D017560 4.3e-11 73.6 294 22.8
BraA02t08689Z Brassica rapa HOM05D001038 ORTHO05D010763 4.3e-11 73.6 281 25.3
BcaC07g37457 Brassica carinata HOM05D001038 ORTHO05D010763 1.6e-10 71.6 102 35.3
BolC7t41410H Brassica oleracea HOM05D001038 ORTHO05D010763 2.8e-10 70.9 331 21.1
BcaB07g32586 Brassica carinata HOM05D004375 ORTHO05D016090 3.6e-10 70.5 130 33.1
Thhalv10003093m.g Eutrema salsugineum HOM05D001038 ORTHO05D010763 6.2e-10 69.7 190 24.2
BcaB04g18537 Brassica carinata HOM05D001038 ORTHO05D000395 8.1e-10 69.3 126 31.0
AL5G24460 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 1.1e-09 68.9 236 21.6
C07p18290 Brassica napus HOM05D001038 ORTHO05D010763 1.1e-09 68.9 123 30.1
BcaB01g01303 Brassica carinata HOM05D001038 ORTHO05D000395 1.8e-09 68.2 316 24.4
C07p34820 Brassica napus HOM05D001038 ORTHO05D000395 3.1e-09 67.4 267 25.1
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 4.0e-09 67.0 133 29.3
BNapus_Darmor_BZH_scaffold_38p00010 Brassica napus HOM05D001038 ORTHO05D010946 4.0e-09 67.0 64 51.6
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 4.0e-09 67.0 133 29.3
BcaB08g34624 Brassica carinata HOM05D001038 ORTHO05D010763 5.3e-09 66.6 84 40.5
Thhalv10001261m.g Eutrema salsugineum HOM05D001038 ORTHO05D010763 5.3e-09 66.6 275 20.7
C05p36210 Brassica napus HOM05D001038 ORTHO05D017560 6.9e-09 66.2 198 23.7
AL6G49460 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 9.0e-09 65.9 211 20.9
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 9.0e-09 65.9 128 32.8
BraA06t24545Z Brassica rapa HOM05D001038 ORTHO05D024045 1.2e-08 65.5 272 23.5
AL3G41000 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 2.0e-08 64.7 181 21.5
Aa31LG10G13150 Aethionema arabicum HOM05D000471 ORTHO05D000199 2.6e-08 64.3 212 24.1
Aa31LG2G16260 Aethionema arabicum HOM05D001285 ORTHO05D000199 2.6e-08 64.3 207 25.1
Aa31LG9G6340 Aethionema arabicum HOM05D000471 ORTHO05D000199 2.6e-08 64.3 207 24.6
C01p30040 Brassica napus HOM05D004375 ORTHO05D016090 2.6e-08 64.3 131 30.5
BolC1t02944H Brassica oleracea HOM05D004375 ORTHO05D016090 2.6e-08 64.3 131 30.5
Carub.0009s0004 Capsella rubella HOM05D000675 ORTHO05D000395 2.6e-08 64.3 191 27.7
BraA06t25408Z Brassica rapa HOM05D001038 ORTHO05D010763 5.8e-08 63.2 93 30.1
Carub.0029s0001 Capsella rubella HOM05D000675 ORTHO05D000395 5.8e-08 63.2 138 26.8
Sp7g08630 Schrenkiella parvula HOM05D000471 ORTHO05D000199 5.8e-08 63.2 180 26.1
Aa31LG1G3610 Aethionema arabicum HOM05D001285 ORTHO05D000199 7.6e-08 62.8 207 24.6
Aa31LG6G12780 Aethionema arabicum HOM05D001285 ORTHO05D000199 7.6e-08 62.8 207 24.6
BolC4t25532H Brassica oleracea HOM05D000675 ORTHO05D003044 7.6e-08 62.8 178 23.6
AL6G43780 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 1.3e-07 62.0 187 20.3
BcaC04g21457 Brassica carinata HOM05D004375 ORTHO05D008558 1.3e-07 62.0 176 25.6
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-07 62.0 200 22.0
C07p12170 Brassica napus HOM05D001038 ORTHO05D010763 1.3e-07 62.0 360 21.7
C09p31560 Brassica napus HOM05D004375 ORTHO05D008558 1.3e-07 62.0 176 25.6
BolC9t56012H Brassica oleracea HOM05D004375 ORTHO05D008558 1.3e-07 62.0 176 25.6
Carub.0001s3343 Capsella rubella HOM05D000675 ORTHO05D000395 1.3e-07 62.0 162 26.5
Carub.0029s0003 Capsella rubella HOM05D000675 ORTHO05D000395 1.7e-07 61.6 134 26.1
Aa31LG10G10430 Aethionema arabicum HOM05D000471 ORTHO05D000199 2.2e-07 61.2 206 24.8
BcaB03g15573 Brassica carinata HOM05D001285 ORTHO05D000199 2.9e-07 60.8 123 28.5
BcaC06g30937 Brassica carinata HOM05D001285 ORTHO05D000199 2.9e-07 60.8 123 28.5
C04p39400 Brassica napus HOM05D000675 ORTHO05D003044 2.9e-07 60.8 178 24.2
C04p39430 Brassica napus HOM05D000675 ORTHO05D003044 2.9e-07 60.8 178 24.2
C04p39650 Brassica napus HOM05D000675 ORTHO05D003044 2.9e-07 60.8 178 24.2
BolC4t25508H Brassica oleracea HOM05D000675 ORTHO05D003044 2.9e-07 60.8 178 24.2
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 4.9e-07 60.1 265 24.2
BcaB06g26290 Brassica carinata HOM05D004375 ORTHO05D008558 4.9e-07 60.1 187 25.7
Carub.0004s0647 Capsella rubella HOM05D000675 ORTHO05D000395 4.9e-07 60.1 169 24.9
Carub.0008s2148 Capsella rubella HOM05D000471 ORTHO05D000199 4.9e-07 60.1 105 31.4
AL2G29150 Arabidopsis lyrata HOM05D020011 ORTHO05D021433 6.4e-07 59.7 204 21.6
AL5G38970 Arabidopsis lyrata HOM05D020011 ORTHO05D021433 6.4e-07 59.7 204 21.6
BcaC06g32416 Brassica carinata HOM05D001038 ORTHO05D017617 8.4e-07 59.3 128 34.4
Carub.0008s0715 Capsella rubella HOM05D000675 ORTHO05D000395 1.1e-06 58.9 140 26.4
A04p11350 Brassica napus HOM05D001038 ORTHO05D033175 1.4e-06 58.5 55 40.0
C03p10830 Brassica napus HOM05D004375 ORTHO05D008558 1.4e-06 58.5 61 36.1
BraA02t08415Z Brassica rapa HOM05D000675 ORTHO05D003044 1.4e-06 58.5 105 30.5
BraA04t16797Z Brassica rapa HOM05D001038 ORTHO05D033175 1.4e-06 58.5 55 40.0
BcaB06g27217 Brassica carinata HOM05D020314 ORTHO05D010946 1.9e-06 58.2 179 27.4
BcaB08g35558 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-06 58.2 124 33.1
BcaC04g22192 Brassica carinata HOM05D001038 ORTHO05D017617 1.9e-06 58.2 187 28.9
BolC9t55139H Brassica oleracea HOM05D001038 ORTHO05D017617 1.9e-06 58.2 113 35.4
BcaB06g28882 Brassica carinata HOM05D004375 ORTHO05D008558 2.4e-06 57.8 158 25.3
BcaC06g33888 Brassica carinata HOM05D001038 ORTHO05D017617 2.4e-06 57.8 131 32.8
C08p05940 Brassica napus HOM05D001038 ORTHO05D024385 2.4e-06 57.8 225 23.1
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 2.4e-06 57.8 332 21.7
BcaB05g22558 Brassica carinata HOM05D004375 ORTHO05D008558 3.2e-06 57.4 188 25.0
BcaC02g12835 Brassica carinata HOM05D000675 ORTHO05D000395 3.2e-06 57.4 173 25.4
A04p09980 Brassica napus HOM05D000675 ORTHO05D021717 3.2e-06 57.4 131 26.0
C04p39370 Brassica napus HOM05D000675 ORTHO05D000395 3.2e-06 57.4 173 25.4
BolC4t25504H Brassica oleracea HOM05D000675 ORTHO05D000395 3.2e-06 57.4 173 25.4
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 3.2e-06 57.4 138 29.0
BraA04t16659Z Brassica rapa HOM05D000675 ORTHO05D021717 3.2e-06 57.4 131 26.0
Thhalv10002270m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 3.2e-06 57.4 108 27.8
C07p35880 Brassica napus HOM05D001038 ORTHO05D017617 4.2e-06 57.0 84 39.3
BolC7t44104H Brassica oleracea HOM05D001038 ORTHO05D017617 4.2e-06 57.0 131 32.1
C06p12490 Brassica napus HOM05D004375 ORTHO05D008558 5.4e-06 56.6 132 28.0
C06p26270 Brassica napus HOM05D001038 ORTHO05D017617 5.4e-06 56.6 84 39.3
BcaB03g14886 Brassica carinata HOM05D001038 ORTHO05D010946 7.1e-06 56.2 128 32.0
Carub.0001s3338 Capsella rubella HOM05D000675 ORTHO05D000395 7.1e-06 56.2 146 29.5
C07p49090 Brassica napus HOM05D002776 ORTHO05D003044 9.3e-06 55.8 107 29.9


User provided reference genes

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