Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p27810 Brassica napus HOM05D003639 ORTHO05D004246 1.1e-30 136.0 70 100.0
BcaC01g05332 Brassica carinata HOM05D003639 ORTHO05D004246 4.3e-30 134.0 69 98.6
BolC3t15153H Brassica oleracea HOM05D003639 ORTHO05D004246 4.3e-30 134.0 69 98.6
BcaC02g12784 Brassica carinata HOM05D003639 ORTHO05D004246 6.7e-23 110.2 60 93.3
A04p31660 Brassica napus HOM05D003639 ORTHO05D004246 6.7e-23 110.2 60 93.3
C04p02760 Brassica napus HOM05D003639 ORTHO05D004246 6.7e-23 110.2 60 93.3
C04p69090 Brassica napus HOM05D003639 ORTHO05D004246 6.7e-23 110.2 60 93.3
BolC4t21916H Brassica oleracea HOM05D003639 ORTHO05D004246 6.7e-23 110.2 60 93.3
BolC4t28406H Brassica oleracea HOM05D003639 ORTHO05D004246 6.7e-23 110.2 60 93.3
BraA04t18624Z Brassica rapa HOM05D003639 ORTHO05D004246 6.7e-23 110.2 60 93.3
AT2G41500 Arabidopsis thaliana HOM05D003639 ORTHO05D004246 2.0e-22 108.6 60 91.7
Carub.0004s0611 Capsella rubella HOM05D003639 ORTHO05D004246 2.0e-22 108.6 60 91.7
CARHR136620 Cardamine hirsuta HOM05D003639 ORTHO05D004246 2.0e-22 108.6 60 91.7
Sp4g23770 Schrenkiella parvula HOM05D003639 ORTHO05D004246 3.3e-22 107.8 60 90.0
Thhalv10000860m.g Eutrema salsugineum HOM05D003639 ORTHO05D004246 5.7e-22 107.1 60 90.0
A05p02320 Brassica napus HOM05D003639 ORTHO05D004246 7.4e-22 106.7 59 91.5
BraA05t19227Z Brassica rapa HOM05D003639 ORTHO05D004246 7.4e-22 106.7 59 91.5
AL4G39590 Arabidopsis lyrata HOM05D003639 ORTHO05D004246 9.7e-22 106.3 60 90.0
Thhalv10016457m.g Eutrema salsugineum HOM05D003639 ORTHO05D004246 2.2e-21 105.1 60 88.3
AL3G43260 Arabidopsis lyrata HOM05D003639 ORTHO05D004246 5.3e-20 100.5 60 83.3
Cpa.g.sc120.6 Carica papaya HOM05D003639 ORTHO05D004246 3.0e-15 84.7 58 69.0
THA.LOC104824426 Tarenaya hassleriana HOM05D003639 ORTHO05D004246 2.0e-14 82.0 60 68.3
HPP92_010189 Vanilla planifolia HOM05D003639 ORTHO05D004246 1.6e-11 72.4 59 55.9
HPP92_010210 Vanilla planifolia HOM05D000527 ORTHO05D000559 1.6e-11 72.4 59 55.9
COL.COLO4_13929 Corchorus olitorius HOM05D003639 ORTHO05D004246 5.9e-11 70.5 61 52.5
AT2G05720 Arabidopsis thaliana HOM05D003639 ORTHO05D004246 1.1e-09 66.2 41 80.5
TAR065G0005 Trochodendron aralioides HOM05D003639 ORTHO05D004246 1.5e-09 65.9 47 61.7
Ah.13g076790 Amaranthus hybridus HOM05D003639 ORTHO05D004246 2.1e-08 62.0 48 58.3
PGR004G0521 Punica granatum HOM05D003639 ORTHO05D004246 2.3e-07 58.5 39 69.2
MCO12G002 Micromonas commoda HOM05D003639 ORTHO05D004246 3.0e-07 58.2 60 45.0
FAN02G3905 Fragaria x ananassa HOM05D003639 ORTHO05D004246 4.4e-06 54.3 60 50.0
PGSC0003DMG400012703 Solanum tuberosum HOM05D003639 ORTHO05D004246 4.4e-06 54.3 39 59.0
PRCOL_00003365 Prasinoderma coloniale HOM05D003639 ORTHO05D004246 7.5e-06 53.5 57 47.4
Solyc04g016510.3 Solanum lycopersicum HOM05D003639 ORTHO05D004246 9.7e-06 53.1 39 56.4
Sopen04g008580 Solanum pennellii HOM05D003639 ORTHO05D004246 9.7e-06 53.1 39 56.4


User provided reference genes

Program Settings