Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p17810 Brassica napus HOM05D004719 ORTHO05D005519 2.3e-93 345.5 166 100.0
BcaC01g06246 Brassica carinata HOM05D004719 ORTHO05D005519 2.4e-50 202.6 186 62.9
BcaNung06632 Brassica carinata HOM05D004719 ORTHO05D005519 2.4e-50 202.6 186 62.9
C03p17720 Brassica napus HOM05D004719 ORTHO05D005519 2.4e-50 202.6 186 62.9
BolC3t14182H Brassica oleracea HOM05D004719 ORTHO05D005519 2.4e-50 202.6 198 60.1
A03p15190 Brassica napus HOM05D004719 ORTHO05D005519 5.3e-50 201.4 191 62.3
BraA03t10813Z Brassica rapa HOM05D004719 ORTHO05D005519 9.0e-50 200.7 191 62.3
BcaC01g06237 Brassica carinata HOM05D001465 ORTHO05D001434 1.3e-45 186.8 142 71.8
Thhalv10014603m.g Eutrema salsugineum HOM05D004719 ORTHO05D005519 7.6e-41 171.0 191 58.1
Sp6g15480 Schrenkiella parvula HOM05D004719 ORTHO05D005519 1.3e-40 170.2 193 58.5
AL8G28040 Arabidopsis lyrata HOM05D004719 ORTHO05D005519 1.2e-38 163.7 182 59.3
BolC9t57191H Brassica oleracea HOM05D004719 ORTHO05D005519 2.7e-38 162.5 184 54.9
BcaC04g20465 Brassica carinata HOM05D004719 ORTHO05D005519 1.0e-37 160.6 178 56.2
C09p43180 Brassica napus HOM05D004719 ORTHO05D005519 1.0e-37 160.6 178 56.2
AT5G53330 Arabidopsis thaliana HOM05D004719 ORTHO05D005519 1.5e-36 156.8 185 57.8
Aa31LG3G9210 Aethionema arabicum HOM05D004719 ORTHO05D005519 3.3e-36 155.6 189 52.4
Carub.0008s1351 Capsella rubella HOM05D004719 ORTHO05D005519 6.2e-35 151.4 190 53.7
CARHR266390 Cardamine hirsuta HOM05D004719 ORTHO05D005519 6.2e-35 151.4 180 55.6
BraA10t43168Z Brassica rapa HOM05D004719 ORTHO05D005519 8.1e-35 151.0 194 52.6
BcaB08g35695 Brassica carinata HOM05D004719 ORTHO05D005519 2.4e-34 149.4 198 52.5
A10p10840 Brassica napus HOM05D004719 ORTHO05D005519 3.1e-34 149.1 191 54.5
BcaNung07347 Brassica carinata HOM05D004719 ORTHO05D005519 1.2e-33 147.1 143 60.8
BolC3t14188H Brassica oleracea HOM05D004719 ORTHO05D005519 7.6e-33 144.4 97 77.3
Thecc.03G191400 Theobroma cacao HOM05D004719 ORTHO05D005519 1.8e-29 133.3 186 46.8
Gohir.A11G013800 Gossypium hirsutum HOM05D004719 ORTHO05D005519 3.0e-29 132.5 191 46.1
Duzib068G0142 Durio zibethinus HOM05D004719 ORTHO05D005519 2.5e-28 129.4 186 45.7
Gorai.007G014400 Gossypium raimondii HOM05D004719 ORTHO05D005519 2.5e-28 129.4 192 45.3
Duzib084G0320 Durio zibethinus HOM05D004719 ORTHO05D005519 1.6e-27 126.7 186 45.2
Gohir.D11G014000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 1.6e-27 126.7 191 45.0
THA.LOC104800282 Tarenaya hassleriana HOM05D004719 ORTHO05D005519 2.8e-27 125.9 192 45.3
Dinv35299 Davidia involucrata HOM05D004719 ORTHO05D005519 1.1e-26 124.0 189 43.9
TAR333G0005 Trochodendron aralioides HOM05D004719 ORTHO05D005519 5.3e-26 121.7 188 43.1
TAR374G0131 Trochodendron aralioides HOM05D004719 ORTHO05D005519 6.9e-26 121.3 182 44.0
Nn7g37372 Nelumbo nucifera HOM05D004719 ORTHO05D005519 9.0e-26 120.9 186 42.5
TWI14G0874 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 4.5e-25 118.6 191 45.0
PSO063G4149 Papaver somniferum HOM05D004719 ORTHO05D005519 1.0e-24 117.5 192 42.2
PSO170G2586 Papaver somniferum HOM05D004719 ORTHO05D005519 1.3e-24 117.1 192 42.2
MD07G1283600 Malus domestica HOM05D004719 ORTHO05D005519 2.2e-24 116.3 201 43.3
TWI23G0029 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 2.2e-24 116.3 189 46.0
vmacro10099 Vaccinium macrocarpon HOM05D004719 ORTHO05D005519 2.2e-24 116.3 182 42.9
Manes.06G156000 Manihot esculenta HOM05D004719 ORTHO05D005519 6.5e-24 114.8 183 42.1
Duzib205G0172 Durio zibethinus HOM05D004719 ORTHO05D005519 1.4e-23 113.6 188 41.5
Rhsim09G0203300 Rhododendron simsii HOM05D004719 ORTHO05D005519 1.9e-23 113.2 210 40.0
Ah.07g206120 Amaranthus hybridus HOM05D004719 ORTHO05D005519 2.5e-23 112.8 187 42.2
MD01G1213900 Malus domestica HOM05D004719 ORTHO05D005519 2.5e-23 112.8 137 51.1
arahy.Tifrunner.gnm1.ann1.A0EQPQ Arachis hypogaea HOM05D004719 ORTHO05D005519 5.5e-23 111.7 192 40.6
Lj1g0014949 Lotus japonicus HOM05D004719 ORTHO05D005519 7.1e-23 111.3 197 40.6
arahy.Tifrunner.gnm1.ann1.YXX8CM Arachis hypogaea HOM05D004719 ORTHO05D005519 2.1e-22 109.8 137 48.2
Haze_00101 Corylus avellana HOM05D004719 ORTHO05D005519 2.7e-22 109.4 143 49.0
THA.LOC104811935 Tarenaya hassleriana HOM05D004719 ORTHO05D005519 4.6e-22 108.6 192 42.2
Potri.015G023600 Populus trichocarpa HOM05D004719 ORTHO05D005519 7.9e-22 107.8 137 46.0
CSS0006896 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 1.0e-21 107.5 195 39.0
CSS0042605 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 1.0e-21 107.5 195 39.0
Medtr3g090640 Medicago truncatula HOM05D004719 ORTHO05D005519 1.0e-21 107.5 192 41.1
Nn1g01780 Nelumbo nucifera HOM05D004719 ORTHO05D005519 1.3e-21 107.1 189 39.7
Sed0016292 Sechium edule HOM05D004719 ORTHO05D005519 1.3e-21 107.1 184 41.3
Ciclev10005830m.g Citrus clementina HOM05D004719 ORTHO05D005519 1.8e-21 106.7 188 43.6
Phvul.008G159900 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 1.8e-21 106.7 180 42.8
Sc13g0009490 Simmondsia chinensis HOM05D004719 ORTHO05D005519 1.8e-21 106.7 134 47.0
TWI39G0409 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 2.3e-21 106.3 193 42.5
Ca_16667_v3 Cicer arietinum L. HOM05D004719 ORTHO05D005519 3.0e-21 105.9 135 47.4
CAN.G204.6 Capsicum annuum HOM05D004719 ORTHO05D005519 3.9e-21 105.5 166 42.8
Atru.chr1.287 Acer truncatum HOM05D004719 ORTHO05D005519 5.1e-21 105.1 132 48.5
Potri.012G033300 Populus trichocarpa HOM05D004719 ORTHO05D005519 5.1e-21 105.1 189 38.6
SGA_v2.0_scaffold192G40593 Striga asiatica HOM05D004719 ORTHO05D005519 6.7e-21 104.8 185 41.6
Actinidia31859 Actinidia chinensis HOM05D004719 ORTHO05D005519 8.7e-21 104.4 134 47.8
Psat5g080520 Pisum sativum HOM05D004719 ORTHO05D005519 8.7e-21 104.4 193 39.9
MSTRG.8686 Avicennia marina HOM05D004719 ORTHO05D005519 1.1e-20 104.0 194 42.3
ClCG01G000680 Citrullus lanatus HOM05D004719 ORTHO05D005519 1.1e-20 104.0 137 45.3
EL10Ac3g05361 Beta vulgaris HOM05D004719 ORTHO05D005519 1.9e-20 103.2 189 38.6
SalBow4G0130 Salvia bowleyana HOM05D004719 ORTHO05D005519 1.9e-20 103.2 182 41.2
CANSAT21G2536 Cannabis sativa HOM05D004719 ORTHO05D005519 2.5e-20 102.8 181 40.9
Gohir.D09G178000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 2.5e-20 102.8 185 41.1
Hma1.2p1_1891F.1_g306690 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 2.5e-20 102.8 192 41.1
Lj1C1011G7 Lonicera japonica HOM05D004719 ORTHO05D005519 2.5e-20 102.8 131 46.6
Aqoxy5G04028 Aquilegia oxysepala HOM05D004719 ORTHO05D005519 3.3e-20 102.4 134 47.0
COL.COLO4_08254 Corchorus olitorius HOM05D004719 ORTHO05D005519 3.3e-20 102.4 138 44.2
HanXRQChr07g0207131 Helianthus annuus HOM05D004719 ORTHO05D005519 3.3e-20 102.4 181 41.4
Sed0024250 Sechium edule HOM05D004719 ORTHO05D005519 3.3e-20 102.4 190 40.0
Cc02_g02010 Coffea canephora HOM05D004719 ORTHO05D005519 4.3e-20 102.1 134 46.3
Oeu049096.1 Olea europaea HOM05D004719 ORTHO05D005519 4.3e-20 102.1 193 39.9
FAN03G2418 Fragaria x ananassa HOM05D004719 ORTHO05D005519 5.7e-20 101.7 207 38.6
Hma1.2p1_0327F.1_g126670 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 5.7e-20 101.7 191 40.3
AUR62031477 Chenopodium quinoa HOM05D004719 ORTHO05D005519 7.4e-20 101.3 140 43.6
Cfa016352 Carpinus fangiana HOM05D004719 ORTHO05D005519 9.7e-20 100.9 201 37.8
Gorai.006G200100 Gossypium raimondii HOM05D004719 ORTHO05D005519 9.7e-20 100.9 185 41.1
Peaxi162Scf00904g00473 Petunia axillaris HOM05D004719 ORTHO05D005519 9.7e-20 100.9 178 40.4
CsaV3_5G000780 Cucumis sativus L. HOM05D004719 ORTHO05D005519 1.3e-19 100.5 189 39.2
ECA238G1719 Erigeron canadensis HOM05D000316 ORTHO05D001978 1.3e-19 100.5 184 40.8
FAN06G1194 Fragaria x ananassa HOM05D004719 ORTHO05D005519 1.3e-19 100.5 141 45.4
Glyma.04G239200 Glycine max HOM05D004719 ORTHO05D005519 1.3e-19 100.5 183 41.0
Hma1.2p1_0142F.1_g064100 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 1.3e-19 100.5 134 45.5
Nitab4.5_0001331g0150 Nicotiana tabacum HOM05D004719 ORTHO05D005519 1.3e-19 100.5 180 41.1
AUR62021055 Chenopodium quinoa HOM05D004719 ORTHO05D005519 1.6e-19 100.1 140 42.9
Lalb_Chr23g0271411 Lupinus albus HOM05D004719 ORTHO05D005519 1.6e-19 100.1 194 41.2
Prupe.2G306000 Prunus persica HOM05D004719 ORTHO05D005519 1.6e-19 100.1 200 40.5
SalBow4G0254 Salvia bowleyana HOM05D004719 ORTHO05D005519 1.6e-19 100.1 182 40.7
DCAR_020296 Daucus carota HOM05D004719 ORTHO05D005519 2.2e-19 99.8 167 43.1
Nitab4.5_0000472g0190 Nicotiana tabacum HOM05D004719 ORTHO05D005519 2.2e-19 99.8 180 41.1
PGR042G1451 Punica granatum HOM05D004719 ORTHO05D005519 2.2e-19 99.8 187 41.2
Lsat_1_v5_gn_2_134381 Lactuca sativa HOM05D004719 ORTHO05D005519 2.8e-19 99.4 130 48.5
Peaxi162Scf00618g00530 Petunia axillaris HOM05D004719 ORTHO05D005519 3.7e-19 99.0 134 46.3
Gohir.A09G183300 Gossypium hirsutum HOM05D004719 ORTHO05D005519 4.8e-19 98.6 185 40.0
Oeu009271.1 Olea europaea HOM05D004719 ORTHO05D005519 4.8e-19 98.6 189 40.7
CiPaw.06G006600 Carya illinoinensis HOM05D004719 ORTHO05D005519 6.3e-19 98.2 140 45.7
Glyma.06G124600 Glycine max HOM05D004719 ORTHO05D005519 6.3e-19 98.2 183 41.0
QL09p011210 Quercus lobata HOM05D004719 ORTHO05D005519 1.1e-18 97.4 137 44.5
CDE08G1019 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 1.4e-18 97.1 190 38.9
MELO3C005862.2 Cucumis melo HOM05D004719 ORTHO05D005519 1.4e-18 97.1 140 42.9
FAN10G3127 Fragaria x ananassa HOM05D004719 ORTHO05D005519 1.8e-18 96.7 206 37.4
PGR142G1718 Punica granatum HOM05D004719 ORTHO05D005519 1.8e-18 96.7 137 43.1
FvH4_7g30890 Fragaria vesca HOM05D004719 ORTHO05D005519 2.4e-18 96.3 207 39.6
RcHm_v2.0_Chr1g0379961 Rosa chinensis HOM05D004719 ORTHO05D005519 2.4e-18 96.3 198 38.9
GSVIVG01028725001 Vitis vinifera HOM05D004719 ORTHO05D005519 5.3e-18 95.1 151 43.7
FAN06G4721 Fragaria x ananassa HOM05D004719 ORTHO05D005519 6.9e-18 94.7 205 38.0
FAN01G1522 Fragaria x ananassa HOM05D004719 ORTHO05D005519 9.0e-18 94.4 212 36.8
HanXRQChr14g0462731 Helianthus annuus HOM05D004719 ORTHO05D005519 9.0e-18 94.4 131 45.8
unitig_747.g21854 Utricularia gibba HOM05D004719 ORTHO05D005519 1.5e-17 93.6 135 43.0
Cpa.g.sc3.37 Carica papaya HOM05D004719 ORTHO05D005519 2.6e-17 92.8 189 37.6
CAN.G108.16 Capsicum annuum HOM05D004719 ORTHO05D005519 3.4e-17 92.4 166 41.0
Migut.F00251 Erythranthe guttata HOM05D004719 ORTHO05D005519 3.4e-17 92.4 193 37.8
PGSC0003DMG400028901 Solanum tuberosum HOM05D004719 ORTHO05D005519 3.4e-17 92.4 191 37.7
PGSC0003DMG400009067 Solanum tuberosum HOM05D004719 ORTHO05D005519 1.3e-16 90.5 185 38.4
VMungo1309G2489 Vigna mungo HOM05D004719 ORTHO05D005519 2.2e-16 89.7 165 38.2
Actinidia34185 Actinidia chinensis HOM05D004719 ORTHO05D005519 3.8e-16 89.0 134 42.5
ATR0661G055 Amborella trichopoda HOM05D004719 ORTHO05D005519 3.8e-16 89.0 201 36.3
PGR142G4196 Punica granatum HOM05D004719 ORTHO05D005519 3.8e-16 89.0 173 36.4
TPR.G33870 Trifolium pratense HOM05D004719 ORTHO05D005519 5.0e-16 88.6 183 38.3
HPP92_008641 Vanilla planifolia HOM05D004719 ORTHO05D005519 5.0e-16 88.6 134 38.8
Eucgr.A02672 Eucalyptus grandis HOM05D004719 ORTHO05D005519 6.5e-16 88.2 184 37.5
MBI06_g04286_MAGBIO Magnolia biondii HOM05D004719 ORTHO05D005519 6.5e-16 88.2 187 36.9
Manes.14G019414 Manihot esculenta HOM05D004719 ORTHO05D005519 1.4e-15 87.0 142 45.1
Phvul.009G136700 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 1.9e-15 86.7 189 36.0
Solyc03g007520.3 Solanum lycopersicum HOM05D004719 ORTHO05D005519 2.5e-15 86.3 194 36.1
Sopen03g003480 Solanum pennellii HOM05D004719 ORTHO05D005519 5.5e-15 85.1 194 35.6
VMungo0647G2259 Vigna mungo HOM05D004719 ORTHO05D005519 1.2e-14 84.0 148 43.9
MSTRG.27052 Avicennia marina HOM05D004719 ORTHO05D005519 1.6e-14 83.6 195 36.4
CDE02G1124 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 1.8e-13 80.1 192 35.9
Os06g0160400 Oryza sativa ssp. japonica HOM05D004719 ORTHO05D005519 2.3e-13 79.7 144 38.2
Zm00001eb376120 Zea mays HOM05D004719 ORTHO05D005519 8.8e-13 77.8 138 39.9
Mapoly0050s0076 Marchantia polymorpha HOM05D004719 ORTHO05D005519 4.8e-11 72.0 191 33.5
AagrBONN_evm.TU.Sc2ySwM_340.345 Anthoceros agrestis HOM05D004719 ORTHO05D005519 4.5e-09 65.5 185 31.4
SEGI_18632 Sequoiadendron giganteum HOM05D004719 ORTHO05D005519 1.1e-07 60.8 138 36.2
Pp3c1_11420 Physcomitrium patens HOM05D004719 ORTHO05D005519 3.6e-06 55.8 178 33.1


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