Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p13310 Brassica napus HOM05D007195 ORTHO05D042735 9.0e-36 152.9 70 100.0
BolC3t13793H Brassica oleracea HOM05D007195 ORTHO05D042735 9.0e-36 152.9 70 100.0
Thhalv10014612m.g Eutrema salsugineum HOM05D007195 ORTHO05D008939 4.7e-16 87.4 70 65.7
BolC2t07319H Brassica oleracea HOM05D007195 ORTHO05D008939 1.8e-15 85.5 70 62.9
AT5G59770 Arabidopsis thaliana HOM05D007195 ORTHO05D008939 2.3e-15 85.1 70 62.9
Carub.0008s2043 Capsella rubella HOM05D007195 ORTHO05D008939 2.3e-15 85.1 70 62.9
CARHR273350 Cardamine hirsuta HOM05D007195 ORTHO05D008939 2.3e-15 85.1 70 64.3
BraA02t05767Z Brassica rapa HOM05D007195 ORTHO05D008939 3.9e-15 84.3 70 61.4
Thhalv10027965m.g Eutrema salsugineum HOM05D007195 ORTHO05D008939 3.9e-15 84.3 70 61.4
C02p12160 Brassica napus HOM05D007195 ORTHO05D008939 5.2e-15 84.0 70 61.4
Sp6g21440 Schrenkiella parvula HOM05D007195 ORTHO05D008939 6.7e-15 83.6 70 62.9
A02p06880 Brassica napus HOM05D007195 ORTHO05D008939 8.8e-15 83.2 70 61.4
BcaB05g22577 Brassica carinata HOM05D007195 ORTHO05D008939 1.1e-14 82.8 70 60.0
AL8G36290 Arabidopsis lyrata HOM05D007195 ORTHO05D008939 2.0e-14 82.0 70 60.0
THA.LOC104810801 Tarenaya hassleriana HOM05D007195 ORTHO05D008939 1.6e-11 72.4 70 54.3
Aa31sc23G190 Aethionema arabicum HOM05D007195 ORTHO05D008939 5.9e-11 70.5 70 54.3
Manes.11G134400 Manihot esculenta HOM05D007195 ORTHO05D008939 2.3e-07 58.5 69 43.5
Nitab4.5_0003179g0020 Nicotiana tabacum HOM05D007195 ORTHO05D008939 8.8e-07 56.6 70 45.7
Nitab4.5_0000610g0300 Nicotiana tabacum HOM05D007195 ORTHO05D008939 1.2e-06 56.2 70 45.7
QL01p033425 Quercus lobata HOM05D007195 ORTHO05D008939 1.2e-06 56.2 70 47.1
TWI79G0669 Tripterygium wilfordii HOM05D007195 ORTHO05D008939 1.2e-06 56.2 70 45.7
Solyc11g073130.2 Solanum lycopersicum HOM05D007195 ORTHO05D008939 1.5e-06 55.8 70 47.1
Sopen11g030780 Solanum pennellii HOM05D007195 ORTHO05D008939 1.5e-06 55.8 70 47.1
MBI05_g35606_MAGBIO Magnolia biondii HOM05D007195 ORTHO05D008939 2.0e-06 55.5 70 45.7
Potri.001G235400 Populus trichocarpa HOM05D007195 ORTHO05D008939 2.0e-06 55.5 70 47.1
ECA236G1878 Erigeron canadensis HOM05D007195 ORTHO05D000180 2.6e-06 55.1 70 50.0
Lsat_1_v5_gn_8_78640 Lactuca sativa HOM05D007195 ORTHO05D008939 2.6e-06 55.1 70 45.7
MBI05_g38489_MAGBIO Magnolia biondii HOM05D007195 ORTHO05D008939 3.3e-06 54.7 70 45.7
Ciclev10029246m.g Citrus clementina HOM05D007195 ORTHO05D008939 4.4e-06 54.3 70 45.7
PGSC0003DMG401015537 Solanum tuberosum HOM05D007195 ORTHO05D008939 4.4e-06 54.3 70 45.7
Aqoxy4G03018 Aquilegia oxysepala HOM05D007195 ORTHO05D008939 5.7e-06 53.9 70 45.7
AUR62001839 Chenopodium quinoa HOM05D007195 ORTHO05D008939 7.5e-06 53.5 70 42.9


User provided reference genes

Program Settings