Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p04560 Brassica napus HOM05D006465 ORTHO05D008207 4.7e-79 297.7 144 100.0
BolC3t12987H Brassica oleracea HOM05D006465 ORTHO05D008207 1.0e-78 296.6 144 98.6
A03p04100 Brassica napus HOM05D006465 ORTHO05D008207 2.0e-77 292.4 144 97.2
BraA03t09753Z Brassica rapa HOM05D006465 ORTHO05D008207 2.0e-77 292.4 144 97.2
Sp6g34010 Schrenkiella parvula HOM05D006465 ORTHO05D008207 2.3e-70 268.9 142 90.1
BcaB08g37219 Brassica carinata HOM05D006465 ORTHO05D008207 2.2e-68 262.3 143 89.5
A10p27930 Brassica napus HOM05D006465 ORTHO05D008207 3.7e-68 261.5 143 88.8
Thhalv10014951m.g Eutrema salsugineum HOM05D006465 ORTHO05D008207 2.4e-67 258.8 146 86.3
BraA10t44842Z Brassica rapa HOM05D006465 ORTHO05D008207 2.0e-66 255.8 143 86.7
CARHR204090 Cardamine hirsuta HOM05D006465 ORTHO05D008207 1.7e-65 252.7 146 82.2
AL6G19700 Arabidopsis lyrata HOM05D006465 ORTHO05D008207 2.9e-65 251.9 146 85.6
Carub.0006s0786 Capsella rubella HOM05D006465 ORTHO05D008207 7.2e-64 247.3 146 83.6
AT5G09310 Arabidopsis thaliana HOM05D006465 ORTHO05D008207 3.0e-62 241.9 146 82.2
Aa31LG3G17710 Aethionema arabicum HOM05D003132 ORTHO05D003736 8.9e-62 240.4 138 82.6
THA.LOC104800074 Tarenaya hassleriana HOM05D006465 ORTHO05D008207 9.2e-59 230.3 142 78.9
Thecc.01G132600 Theobroma cacao HOM05D006465 ORTHO05D008207 2.3e-54 215.7 139 71.9
Potri.005G063100 Populus trichocarpa HOM05D006465 ORTHO05D008207 6.8e-54 214.2 139 72.7
MD07G1057500 Malus domestica HOM05D006465 ORTHO05D008207 4.4e-53 211.5 141 73.0
Manes.03G123050 Manihot esculenta HOM05D006465 ORTHO05D008207 9.8e-53 210.3 124 76.6
Sabra05G0052300 Salix brachista HOM05D006465 ORTHO05D008207 1.1e-51 206.8 120 77.5
CiPaw.04G082200 Carya illinoinensis HOM05D006465 ORTHO05D008207 5.4e-51 204.5 119 74.8
Hund23271 Selenicereus undatus HOM05D006465 ORTHO05D008207 5.4e-51 204.5 131 71.0
TWI79G1280 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 5.4e-51 204.5 116 76.7
Haze_25235 Corylus avellana HOM05D006465 ORTHO05D008207 1.6e-50 203.0 144 67.4
Duzib187G1992 Durio zibethinus HOM05D006465 ORTHO05D008207 1.6e-50 203.0 116 75.9
TWI75G0808 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 2.0e-50 202.6 116 75.9
Ca_16948_v3 Cicer arietinum L. HOM05D002517 ORTHO05D003040 4.6e-50 201.4 129 71.3
Ca_16968_v3 Cicer arietinum L. HOM05D006465 ORTHO05D008207 4.6e-50 201.4 129 71.3
Dinv07122 Davidia involucrata HOM05D006465 ORTHO05D008207 7.8e-50 200.7 138 70.3
Psat5g062320 Pisum sativum HOM05D006465 ORTHO05D008207 1.3e-49 199.9 137 70.8
TPR.G28231 Trifolium pratense HOM05D006465 ORTHO05D008207 1.7e-49 199.5 139 69.8
Ciclev10002814m.g Citrus clementina HOM05D006465 ORTHO05D008207 2.3e-49 199.1 139 69.8
Prupe.4G271100 Prunus persica HOM05D006465 ORTHO05D008207 2.3e-49 199.1 132 72.0
CANSAT01G2296 Cannabis sativa HOM05D006465 ORTHO05D008207 3.0e-49 198.7 115 77.4
FvH4_2g08820 Fragaria vesca HOM05D006465 ORTHO05D008207 3.9e-49 198.4 124 74.2
FAN10G0435 Fragaria x ananassa HOM05D006465 ORTHO05D008207 3.9e-49 198.4 124 74.2
FAN15G0521 Fragaria x ananassa HOM05D006465 ORTHO05D008207 3.9e-49 198.4 124 74.2
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 5.0e-49 198.0 120 73.3
Lalb_Chr08g0238351 Lupinus albus HOM05D006465 ORTHO05D008207 5.0e-49 198.0 130 73.1
Glyma.06G153700 Glycine max HOM05D006465 ORTHO05D008207 6.6e-49 197.6 139 67.6
RcHm_v2.0_Chr6g0264391 Rosa chinensis HOM05D006465 ORTHO05D008207 6.6e-49 197.6 139 67.6
CsaV3_2G018330 Cucumis sativus L. HOM05D006465 ORTHO05D008207 1.1e-48 196.8 133 69.9
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 1.1e-48 196.8 120 72.5
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 1.1e-48 196.8 120 72.5
Medtr3g096320 Medicago truncatula HOM05D006465 ORTHO05D008207 1.5e-48 196.4 111 79.3
Atru.chr4.901 Acer truncatum HOM05D006465 ORTHO05D008207 4.3e-48 194.9 120 71.7
Glyma.04G212600 Glycine max HOM05D006465 ORTHO05D008207 1.6e-47 193.0 116 74.1
Hma1.2p1_0476F.1_g160840 Hydrangea macrophylla HOM05D006465 ORTHO05D008207 1.6e-47 193.0 143 64.3
Ah.02g121490 Amaranthus hybridus HOM05D006465 ORTHO05D008207 2.1e-47 192.6 137 67.9
PGR119G2011 Punica granatum HOM05D006465 ORTHO05D008207 2.1e-47 192.6 139 65.5
Lj4A839G53 Lonicera japonica HOM05D006465 ORTHO05D008207 2.8e-47 192.2 132 65.2
arahy.Tifrunner.gnm1.ann1.X6LXMM Arachis hypogaea HOM05D006465 ORTHO05D008207 4.7e-47 191.4 124 72.6
Phvul.009G150900 Phaseolus vulgaris HOM05D006465 ORTHO05D008207 4.7e-47 191.4 130 70.0
VMungo1309G0274 Vigna mungo HOM05D006465 ORTHO05D008207 4.7e-47 191.4 131 69.5
Sc07g0001830 Simmondsia chinensis HOM05D006465 ORTHO05D008207 6.2e-47 191.0 107 78.5
EL10Ac6g15303 Beta vulgaris HOM05D006465 ORTHO05D008207 8.0e-47 190.7 121 73.6
ClCG02G000500 Citrullus lanatus HOM05D006465 ORTHO05D008207 5.2e-46 188.0 119 73.9
arahy.Tifrunner.gnm1.ann1.Q2CXKS Arachis hypogaea HOM05D006465 ORTHO05D008207 6.8e-46 187.6 143 64.3
AUR62003565 Chenopodium quinoa HOM05D006465 ORTHO05D008207 6.8e-46 187.6 132 66.7
Dinv24364 Davidia involucrata HOM05D006465 ORTHO05D008207 8.9e-46 187.2 126 69.0
Sed0005537 Sechium edule HOM05D006465 ORTHO05D008207 8.9e-46 187.2 119 72.3
TAR381G0246 Trochodendron aralioides HOM05D006465 ORTHO05D008207 8.9e-46 187.2 121 71.9
Lsat_1_v5_gn_9_25981 Lactuca sativa HOM05D006465 ORTHO05D008207 1.5e-45 186.4 125 66.4
Lj1g0025116 Lotus japonicus HOM05D006465 ORTHO05D008207 1.5e-45 186.4 138 65.9
AUR62017880 Chenopodium quinoa HOM05D006465 ORTHO05D008207 2.0e-45 186.0 132 66.7
vmacro12798 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 3.4e-45 185.3 133 66.2
Actinidia06618 Actinidia chinensis HOM05D006465 ORTHO05D008207 4.4e-45 184.9 137 65.7
CSS0043698 Camellia sinensis var. sinensis HOM05D006465 ORTHO05D008207 7.5e-45 184.1 107 74.8
Nn5g28548 Nelumbo nucifera HOM05D006465 ORTHO05D008207 9.8e-45 183.7 122 69.7
TAR625G1289 Trochodendron aralioides HOM05D006465 ORTHO05D008207 1.3e-44 183.3 121 70.2
GSVIVG01026483001 Vitis vinifera HOM05D006465 ORTHO05D008207 2.9e-44 182.2 107 74.8
ECA247G0944 Erigeron canadensis HOM05D006465 ORTHO05D008207 8.3e-44 180.6 152 60.5
Aqoxy5G02229 Aquilegia oxysepala HOM05D006465 ORTHO05D000054 1.4e-43 179.9 130 64.6
PSO017G4081 Papaver somniferum HOM05D006465 ORTHO05D008207 4.1e-43 178.3 123 68.3
HanXRQChr15g0491331 Helianthus annuus HOM05D006465 ORTHO05D008207 7.0e-43 177.6 108 71.3
Nitab4.5_0000181g0060 Nicotiana tabacum HOM05D006465 ORTHO05D008207 7.0e-43 177.6 109 72.5
CDE04G1235 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 9.2e-43 177.2 107 68.2
Peaxi162Scf00270g01115 Petunia axillaris HOM05D006465 ORTHO05D008207 9.2e-43 177.2 109 71.6
Sopen06g005870 Solanum pennellii HOM05D006465 ORTHO05D008207 9.2e-43 177.2 133 62.4
PGSC0003DMG400030138 Solanum tuberosum HOM05D006465 ORTHO05D008207 1.2e-42 176.8 109 69.7
PSO170G5905 Papaver somniferum HOM05D006465 ORTHO05D008207 1.6e-42 176.4 123 66.7
FAN24G0187 Fragaria x ananassa HOM05D006465 ORTHO05D008207 2.1e-42 176.0 113 72.6
QL10p043584 Quercus lobata HOM05D006465 ORTHO05D008207 2.7e-42 175.6 168 52.4
CAN.G934.1 Capsicum annuum HOM05D006465 ORTHO05D008207 4.6e-42 174.9 109 69.7
Cc07_g18520 Coffea canephora HOM05D006465 ORTHO05D008207 3.0e-41 172.2 125 64.8
Hund04414 Selenicereus undatus HOM05D006465 ORTHO05D008207 8.6e-41 170.6 183 48.6
Oeu004242.1 Olea europaea HOM05D006465 ORTHO05D008207 3.3e-40 168.7 111 68.5
HPP92_019397 Vanilla planifolia HOM05D006465 ORTHO05D008207 9.5e-40 167.2 111 67.6
MELO3C023238.2 Cucumis melo HOM05D006465 ORTHO05D008207 3.6e-39 165.2 161 54.0
FvH4_3g04510 Fragaria vesca HOM05D006465 ORTHO05D008207 6.2e-39 164.5 97 75.3
FAN11G3155 Fragaria x ananassa HOM05D006465 ORTHO05D008207 6.2e-39 164.5 97 76.3
DCAR_014336 Daucus carota HOM05D006465 ORTHO05D008207 1.8e-38 162.9 107 66.4
MSTRG.3605 Avicennia marina HOM05D006465 ORTHO05D008207 2.3e-38 162.5 109 65.1
Migut.L00880 Erythranthe guttata HOM05D006465 ORTHO05D008207 3.1e-38 162.2 154 51.3
unitig_88.g27767 Utricularia gibba HOM05D006465 ORTHO05D008207 3.1e-38 162.2 151 53.0
Migut.L00965 Erythranthe guttata HOM05D006465 ORTHO05D008207 8.9e-38 160.6 153 52.3
Oeu050125.1 Olea europaea HOM05D006465 ORTHO05D008207 7.5e-37 157.5 155 54.8
AagrBONN_evm.TU.Sc2ySwM_117.2181 Anthoceros agrestis HOM05D006465 ORTHO05D008207 4.9e-36 154.8 120 55.8
Os01g0960000 Oryza sativa ssp. japonica HOM05D006465 ORTHO05D008207 4.9e-36 154.8 114 62.3
Zm00001eb362550 Zea mays HOM05D006465 ORTHO05D008207 8.3e-36 154.1 112 62.5
SGA_v2.0_scaffold19G08773 Striga asiatica HOM05D006465 ORTHO05D008207 1.1e-35 153.7 110 61.8
ATR0138G005 Amborella trichopoda HOM05D006465 ORTHO05D008207 3.2e-35 152.1 112 59.8
SalBow7G2903 Salvia bowleyana HOM05D006465 ORTHO05D008207 9.2e-35 150.6 145 52.4
Pp3c15_3010 Physcomitrium patens HOM05D006465 ORTHO05D008207 2.8e-31 139.0 121 53.7
Mapoly0113s0017 Marchantia polymorpha HOM05D006465 ORTHO05D008207 4.4e-29 131.7 120 48.3
MD02G1262600 Malus domestica HOM05D006465 ORTHO05D008207 7.1e-27 124.4 91 67.0
SMO367G0154 Selaginella moellendorffii HOM05D006465 ORTHO05D008207 1.1e-24 117.1 107 49.5
Potri.007G106200 Populus trichocarpa HOM05D006465 ORTHO05D008207 1.6e-23 113.2 88 63.6
SEGI_17702 Sequoiadendron giganteum HOM05D006465 ORTHO05D008207 9.0e-22 107.5 96 54.2
Solyc06g016760.3 Solanum lycopersicum HOM05D006465 ORTHO05D008207 9.3e-19 97.4 81 56.8
BolC9t59563H Brassica oleracea HOM05D006465 ORTHO05D008207 6.0e-18 94.7 48 91.7
CBR_g29852 Chara braunii HOM05D006465 ORTHO05D008207 1.7e-17 93.2 107 41.1
CDE12G0205 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 1.9e-16 89.7 58 60.3
Lalb_Chr11g0068481 Lupinus albus HOM05D006465 ORTHO05D008207 2.1e-15 86.3 49 79.6
vmacro20733 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 6.9e-14 81.3 73 53.4
Rhsim10G0133300 Rhododendron simsii HOM05D006465 ORTHO05D008207 4.5e-13 78.6 50 68.0
Lalb_Chr11g0068471 Lupinus albus HOM05D006465 ORTHO05D008207 9.9e-13 77.4 48 72.9
Lj4A838T21 Lonicera japonica HOM05D006465 ORTHO05D008207 2.2e-12 76.3 50 66.0
Eucgr.I00202 Eucalyptus grandis HOM05D006465 ORTHO05D008207 3.8e-12 75.5 47 68.1
Cc00_g19040 Coffea canephora HOM05D006465 ORTHO05D008207 9.3e-11 70.9 48 64.6
Cc00_g31500 Coffea canephora HOM05D006465 ORTHO05D008207 2.7e-10 69.3 47 63.8
PRCOL_00001485 Prasinoderma coloniale HOM05D006465 ORTHO05D008207 8.7e-09 64.3 94 41.5
Cre07.g323050 Chlamydomonas reinhardtii HOM05D006465 ORTHO05D008207 5.6e-08 61.6 71 36.6


User provided reference genes

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