Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p04140 Brassica napus HOM05D004692 ORTHO05D006291 8.0e-235 816.6 385 100.0
BolC3t12946H Brassica oleracea HOM05D004692 ORTHO05D006291 3.3e-228 794.7 386 96.1
A03p03660 Brassica napus HOM05D004692 ORTHO05D006291 3.0e-226 788.1 386 95.6
BraA03t09714Z Brassica rapa HOM05D004692 ORTHO05D006291 3.4e-225 784.6 386 94.8
BcaNung05091 Brassica carinata HOM05D004692 ORTHO05D006291 5.4e-223 777.3 387 94.6
A10p28500 Brassica napus HOM05D004692 ORTHO05D006291 1.4e-218 762.7 380 92.9
C09p68780 Brassica napus HOM05D004692 ORTHO05D006291 6.8e-218 760.4 384 92.7
BcaB08g37277 Brassica carinata HOM05D004692 ORTHO05D006291 2.6e-217 758.4 386 92.0
Thhalv10013807m.g Eutrema salsugineum HOM05D004692 ORTHO05D006291 8.3e-216 753.4 385 90.1
Sp6g34780 Schrenkiella parvula HOM05D004692 ORTHO05D006291 3.9e-213 744.6 383 90.1
AT5G08170 Arabidopsis thaliana HOM05D004692 ORTHO05D006291 2.5e-212 741.9 385 88.6
AL6G18560 Arabidopsis lyrata HOM05D004692 ORTHO05D006291 1.2e-211 739.6 385 88.3
Carub.0006s0707 Capsella rubella HOM05D004692 ORTHO05D006291 1.4e-210 736.1 379 89.2
BolC9t59625H Brassica oleracea HOM05D004692 ORTHO05D006291 2.1e-206 722.2 384 89.3
BraA10t44898Z Brassica rapa HOM05D004692 ORTHO05D006291 2.7e-206 721.8 383 88.5
BcaB01g05624 Brassica carinata HOM05D004692 ORTHO05D006291 7.8e-206 720.3 386 89.4
Aa31LG3G18370 Aethionema arabicum HOM05D004692 ORTHO05D006291 5.8e-201 704.1 414 80.2
THA.LOC104819389 Tarenaya hassleriana HOM05D004692 ORTHO05D006291 1.5e-188 662.9 371 79.8
TWI81G0688 Tripterygium wilfordii HOM05D004692 ORTHO05D006291 7.4e-180 634.0 373 75.3
MD14G1218000 Malus domestica HOM05D004692 ORTHO05D006291 9.6e-180 633.6 378 75.1
AUR62036914 Chenopodium quinoa HOM05D004692 ORTHO05D006291 6.2e-179 630.9 366 76.5
MD06G1207500 Malus domestica HOM05D004692 ORTHO05D006291 3.4e-177 625.2 377 74.3
Prupe.5G211900 Prunus persica HOM05D004692 ORTHO05D006291 8.4e-176 620.5 377 74.5
HanXRQChr16g0501991 Helianthus annuus HOM05D004692 ORTHO05D006291 2.4e-175 619.0 372 74.5
AUR62032158 Chenopodium quinoa HOM05D004692 ORTHO05D006291 7.1e-175 617.5 366 75.1
FAN13G2141 Fragaria x ananassa HOM05D004692 ORTHO05D006291 9.3e-175 617.1 371 74.7
Hma1.2p1_0744F.1_g211680 Hydrangea macrophylla HOM05D004692 ORTHO05D006291 9.3e-175 617.1 371 73.0
EL10Ac5g11213 Beta vulgaris HOM05D004692 ORTHO05D006291 1.2e-174 616.7 374 74.1
RcHm_v2.0_Chr7g0184081 Rosa chinensis HOM05D004692 ORTHO05D006291 1.2e-174 616.7 368 75.3
CANSAT80G0730 Cannabis sativa HOM05D004692 ORTHO05D006291 2.7e-174 615.5 371 73.6
Ciclev10020592m.g Citrus clementina HOM05D004692 ORTHO05D006291 3.5e-174 615.1 372 74.2
Dinv36841 Davidia involucrata HOM05D004692 ORTHO05D006291 3.5e-174 615.1 369 74.3
Peaxi162Scf00119g00017 Petunia axillaris HOM05D004692 ORTHO05D006291 3.5e-174 615.1 368 75.0
Potri.015G055300 Populus trichocarpa HOM05D004692 ORTHO05D006291 1.0e-173 613.6 366 74.3
GSVIVG01008185001 Vitis vinifera HOM05D004692 ORTHO05D006291 1.0e-173 613.6 369 75.9
DCAR_015115 Daucus carota HOM05D004692 ORTHO05D006291 1.8e-173 612.8 371 73.6
Lalb_Chr13g0302611 Lupinus albus HOM05D004692 ORTHO05D006291 3.9e-173 611.7 369 74.5
Lj5A139T82 Lonicera japonica HOM05D004692 ORTHO05D006291 5.1e-173 611.3 371 73.3
Nitab4.5_0007617g0010 Nicotiana tabacum HOM05D004692 ORTHO05D006291 5.1e-173 611.3 376 73.1
arahy.Tifrunner.gnm1.ann1.51KNRK Arachis hypogaea HOM05D004692 ORTHO05D006291 1.1e-172 610.1 366 75.1
CiPaw.15G118000 Carya illinoinensis HOM05D004692 ORTHO05D006291 1.5e-172 609.8 366 75.1
DCAR_015116 Daucus carota HOM05D004692 ORTHO05D006291 1.5e-172 609.8 371 73.0
Lsat_1_v5_gn_4_112840 Lactuca sativa HOM05D004692 ORTHO05D006291 1.9e-172 609.4 371 73.6
Rhsim08G0150000 Rhododendron simsii HOM05D004692 ORTHO05D006291 1.9e-172 609.4 369 73.7
QL10p021836 Quercus lobata HOM05D004692 ORTHO05D006291 2.5e-172 609.0 371 73.3
Medtr4g112810 Medicago truncatula HOM05D004692 ORTHO05D006291 3.3e-172 608.6 369 74.5
Phvul.003G180900 Phaseolus vulgaris HOM05D004692 ORTHO05D006291 3.3e-172 608.6 371 74.1
FvH4_5g13050 Fragaria vesca HOM05D004692 ORTHO05D006291 4.3e-172 608.2 371 73.9
FAN18G3467 Fragaria x ananassa HOM05D004692 ORTHO05D006291 5.6e-172 607.8 371 73.9
arahy.Tifrunner.gnm1.ann1.F96WR3 Arachis hypogaea HOM05D004692 ORTHO05D006291 1.3e-171 606.7 366 74.9
ECA232G0381 Erigeron canadensis HOM05D004692 ORTHO05D006291 1.6e-171 606.3 371 73.0
QL10p021731 Quercus lobata HOM05D004692 ORTHO05D006291 2.1e-171 605.9 371 73.3
TPR.G2028 Trifolium pratense HOM05D004692 ORTHO05D006291 2.1e-171 605.9 369 73.7
Psat4g044040 Pisum sativum HOM05D004692 ORTHO05D006291 2.8e-171 605.5 369 74.8
PSO017G3616 Papaver somniferum HOM05D004692 ORTHO05D006291 6.2e-171 604.4 374 71.9
Sopen12g019180 Solanum pennellii HOM05D004692 ORTHO05D006291 6.2e-171 604.4 368 74.2
CSS0001909 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.8e-170 602.8 369 71.5
Solyc12g038970.3 Solanum lycopersicum HOM05D004692 ORTHO05D006291 1.8e-170 602.8 368 73.6
Glyma.17G083400 Glycine max HOM05D004692 ORTHO05D006291 2.4e-170 602.4 368 74.7
Ah.11g047310 Amaranthus hybridus HOM05D004692 ORTHO05D006291 3.1e-170 602.1 366 74.6
arahy.Tifrunner.gnm1.ann1.6286TX Arachis hypogaea HOM05D004692 ORTHO05D006291 3.1e-170 602.1 374 73.5
CsaV3_1G003170 Cucumis sativus L. HOM05D004692 ORTHO05D006291 3.1e-170 602.1 375 73.1
Gohir.D07G062400 Gossypium hirsutum HOM05D004692 ORTHO05D006291 4.0e-170 601.7 367 73.0
Hund09975 Selenicereus undatus HOM05D004692 ORTHO05D006291 6.9e-170 600.9 372 72.0
Gohir.A07G057600 Gossypium hirsutum HOM05D004692 ORTHO05D006291 2.6e-169 599.0 367 72.5
Atru.chr9.678 Acer truncatum HOM05D004692 ORTHO05D006291 3.4e-169 598.6 371 73.9
CSS0041638 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 3.4e-169 598.6 369 71.3
Cc04_g07930 Coffea canephora HOM05D004692 ORTHO05D006291 4.5e-169 598.2 369 73.4
Manes.01G023900 Manihot esculenta HOM05D004692 ORTHO05D006291 4.5e-169 598.2 368 73.1
PGSC0003DMG400000653 Solanum tuberosum HOM05D004692 ORTHO05D006291 4.5e-169 598.2 368 73.6
Sed0023319 Sechium edule HOM05D004692 ORTHO05D006291 5.8e-169 597.8 372 72.3
vmacro17655 Vaccinium macrocarpon HOM05D004692 ORTHO05D006291 5.8e-169 597.8 369 71.8
MELO3C017264.2 Cucumis melo HOM05D004692 ORTHO05D006291 7.6e-169 597.4 369 73.2
Actinidia01418 Actinidia chinensis HOM05D004692 ORTHO05D006291 1.3e-168 596.7 379 71.5
Gorai.001G065900 Gossypium raimondii HOM05D004692 ORTHO05D006291 1.3e-168 596.7 368 72.8
CAN.G471.4 Capsicum annuum HOM05D004692 ORTHO05D006291 1.7e-168 596.3 368 71.7
PSO478G1466 Papaver somniferum HOM05D004692 ORTHO05D006291 3.8e-168 595.1 374 70.6
Ah.02g120970 Amaranthus hybridus HOM05D004692 ORTHO05D006291 4.9e-168 594.7 366 73.8
Aqoxy3G00609 Aquilegia oxysepala HOM05D004692 ORTHO05D006291 1.1e-167 593.6 371 72.2
Ca_21742_v3 Cicer arietinum L. HOM05D004692 ORTHO05D006291 2.5e-167 592.4 369 72.6
Hund09942 Selenicereus undatus HOM05D004692 ORTHO05D006291 2.5e-167 592.4 387 70.0
Oeu058039.1 Olea europaea HOM05D004692 ORTHO05D006291 5.5e-167 591.3 366 71.3
Sc12g0006990 Simmondsia chinensis HOM05D004692 ORTHO05D006291 9.3e-167 590.5 368 71.2
Lj4g0008523 Lotus japonicus HOM05D004692 ORTHO05D006291 1.2e-166 590.1 369 72.4
MBI14_g16236_MAGBIO Magnolia biondii HOM05D004692 ORTHO05D006291 3.5e-166 588.6 371 71.7
Migut.J01255 Erythranthe guttata HOM05D004692 ORTHO05D006291 7.9e-166 587.4 374 69.3
arahy.Tifrunner.gnm1.ann1.RJWR3V Arachis hypogaea HOM05D004692 ORTHO05D006291 1.0e-165 587.0 366 73.2
ClCG06G015290 Citrullus lanatus HOM05D004692 ORTHO05D006291 3.0e-165 585.5 369 71.5
VMungo1215G1525 Vigna mungo HOM05D004692 ORTHO05D006291 1.5e-164 583.2 367 72.8
MSTRG.22946 Avicennia marina HOM05D004692 ORTHO05D006291 1.9e-164 582.8 368 69.8
Nn4g23609 Nelumbo nucifera HOM05D004692 ORTHO05D006291 1.9e-164 582.8 365 72.9
Eucgr.B00659 Eucalyptus grandis HOM05D004692 ORTHO05D006291 2.8e-163 578.9 372 70.7
HanXRQChr16g0501981 Helianthus annuus HOM05D004692 ORTHO05D006291 5.3e-162 574.7 423 64.1
PGR083G2684 Punica granatum HOM05D004692 ORTHO05D006291 5.3e-162 574.7 373 70.0
FAN08G1512 Fragaria x ananassa HOM05D004692 ORTHO05D006291 1.3e-160 570.1 346 73.1
ATR0691G179 Amborella trichopoda HOM05D004692 ORTHO05D006291 8.5e-160 567.4 372 69.4
CDE06G1750 Ceratophyllum demersum HOM05D004692 ORTHO05D006291 2.5e-159 565.8 374 67.4
Sabra15G0080100 Salix brachista HOM05D004692 ORTHO05D006291 5.5e-159 564.7 454 59.9
SHI18993 Sapria himalayana HOM05D004692 ORTHO05D006291 1.6e-158 563.1 400 65.0
SalBow5G2075 Salvia bowleyana HOM05D004692 ORTHO05D006291 2.7e-158 562.4 379 68.3
Mapoly0016s0188 Marchantia polymorpha HOM05D004692 ORTHO05D006291 1.1e-156 557.0 368 67.7
SGA_v2.0_scaffold56G20037 Striga asiatica HOM05D004692 ORTHO05D006291 1.1e-156 557.0 351 70.1
CDE07G1308 Ceratophyllum demersum HOM05D004692 ORTHO05D006291 7.4e-156 554.3 371 67.1
Actinidia10430 Actinidia chinensis HOM05D004692 ORTHO05D006291 1.5e-153 546.6 376 67.8
Os04g0466600 Oryza sativa ssp. japonica HOM05D004692 ORTHO05D006291 2.0e-153 546.2 373 67.3
CARHR205010 Cardamine hirsuta HOM05D004692 ORTHO05D006291 1.0e-152 543.9 286 87.4
HPP92_019130 Vanilla planifolia HOM05D004692 ORTHO05D006291 1.7e-152 543.1 377 66.6
Pp3c14_21790 Physcomitrium patens HOM05D004692 ORTHO05D006291 2.9e-152 542.3 366 67.2
TAR374G0590 Trochodendron aralioides HOM05D004692 ORTHO05D006291 1.4e-151 540.0 323 73.7
SMO115G0272 Selaginella moellendorffii HOM05D004692 ORTHO05D006291 5.5e-151 538.1 366 65.8
Thecc.03G112800 Theobroma cacao HOM05D004692 ORTHO05D006291 6.1e-150 534.6 366 67.2
Nitab4.5_0000208g0050 Nicotiana tabacum HOM05D004692 ORTHO05D006291 7.9e-150 534.3 402 62.9
AagrBONN_evm.TU.Sc2ySwM_117.2364 Anthoceros agrestis HOM05D004692 ORTHO05D006291 2.3e-149 532.7 383 63.7
Duzib205G0043 Durio zibethinus HOM05D004692 ORTHO05D006291 8.8e-149 530.8 369 66.1
HPP92_019140 Vanilla planifolia HOM05D004692 ORTHO05D006291 1.4e-143 513.5 363 65.6
unitig_26.g9673 Utricularia gibba HOM05D004692 ORTHO05D006291 6.1e-142 508.1 368 63.0
Haze_18550 Corylus avellana HOM05D004692 ORTHO05D006291 2.2e-136 489.6 308 71.8
Zm00001eb424480 Zea mays HOM05D004692 ORTHO05D006291 1.9e-135 486.5 412 58.7
Ca_25716_v3 Cicer arietinum L. HOM05D004692 ORTHO05D006291 3.0e-133 479.2 291 73.5
arahy.Tifrunner.gnm1.ann1.U185V9 Arachis hypogaea HOM05D004692 ORTHO05D006291 1.6e-126 456.8 367 60.5
CBR_g22406 Chara braunii HOM05D004692 ORTHO05D006291 2.7e-126 456.1 384 58.3
Medtr4g110140 Medicago truncatula HOM05D004692 ORTHO05D006291 3.3e-103 379.4 382 50.8
Pp3c13_22750 Physcomitrium patens HOM05D004692 ORTHO05D006291 2.3e-96 356.7 382 46.6
Sc12g0006960 Simmondsia chinensis HOM05D004692 ORTHO05D006291 3.9e-96 355.9 219 73.1
Cfa019856 Carpinus fangiana HOM05D004692 ORTHO05D006291 5.0e-96 355.5 343 51.9
CSS0041488 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.2e-92 344.4 250 62.4
Cre01.g009350 Chlamydomonas reinhardtii HOM05D004692 ORTHO05D006291 1.5e-92 344.0 384 45.6
CSS0018290 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.2e-89 334.3 228 67.1
CSS0026593 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 3.3e-87 326.2 220 65.9
PRCOL_00005028 Prasinoderma coloniale HOM05D004692 ORTHO05D006291 8.4e-83 311.6 415 42.2
Hund10163 Selenicereus undatus HOM05D004692 ORTHO05D006291 2.1e-81 307.0 369 43.9
CSS0021853 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 3.6e-78 296.2 196 66.8
CSS0048768 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 7.1e-74 282.0 164 72.6
Cpa.g.c37454 Carica papaya HOM05D004692 ORTHO05D006291 1.7e-67 260.8 167 66.5
Lsat_1_v5_gn_5_119361 Lactuca sativa HOM05D004692 ORTHO05D006291 3.1e-61 240.0 171 65.5
Cre01.g053300 Chlamydomonas reinhardtii HOM05D004692 ORTHO05D006291 1.1e-47 194.9 478 29.7
C05p13090 Brassica napus HOM05D004692 ORTHO05D006291 1.9e-47 194.1 101 91.1
BcaC05g25434 Brassica carinata HOM05D004692 ORTHO05D006291 2.5e-47 193.7 101 91.1
Cpa.g.c37318 Carica papaya HOM05D004692 ORTHO05D006291 1.7e-43 181.0 93 86.0
FAN04G1239 Fragaria x ananassa HOM05D004692 ORTHO05D006291 1.0e-35 155.2 155 56.8
Ca_29974_v3 Cicer arietinum L. HOM05D000837 ORTHO05D008386 7.7e-28 129.0 83 72.3
Lsat_1_v5_gn_3_89601 Lactuca sativa HOM05D004692 ORTHO05D006291 4.2e-26 123.2 93 61.3
CDE06G1955 Ceratophyllum demersum HOM05D004692 ORTHO05D019764 7.7e-20 102.4 74 62.2
RcHm_v2.0_Chr2g0129061 Rosa chinensis HOM05D004692 ORTHO05D006291 2.8e-14 84.0 43 81.4
RcHm_v2.0_Chr2g0128461 Rosa chinensis HOM05D004692 ORTHO05D019764 8.2e-14 82.4 163 30.1
arahy.Tifrunner.gnm1.ann1.5N8491 Arachis hypogaea HOM05D004692 ORTHO05D019764 1.1e-13 82.0 71 54.9
SGA_v2.0_scaffold26G11385 Striga asiatica HOM05D004692 ORTHO05D019764 1.4e-13 81.6 47 76.6
RcHm_v2.0_Chr4g0407261 Rosa chinensis HOM05D004692 ORTHO05D019764 4.5e-12 76.6 47 68.1
RcHm_v2.0_Chr2g0164691 Rosa chinensis HOM05D004692 ORTHO05D019764 1.2e-09 68.6 40 72.5
BraA01t02993Z Brassica rapa HOM05D004692 ORTHO05D006291 1.2e-07 62.0 32 81.2
BraA09t36800Z Brassica rapa HOM05D004692 ORTHO05D006291 1.2e-07 62.0 32 81.2


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