Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p58710 Brassica napus HOM05D041306 ORTHO05D005514 1.8e-44 182.2 89 100.0
C01p24870 Brassica napus HOM05D041306 ORTHO05D005514 9.4e-38 159.8 89 89.9
C08p00310 Brassica napus HOM05D041306 ORTHO05D005514 1.1e-25 119.8 67 89.6
A03p16490 Brassica napus HOM05D037327 ORTHO05D005514 3.2e-22 108.2 85 68.2
A09p66780 Brassica napus HOM05D004774 ORTHO05D005514 2.8e-10 68.6 49 67.3
BraA09t42016Z Brassica rapa HOM05D004774 ORTHO05D005514 2.8e-10 68.6 49 67.3
C08p51000 Brassica napus HOM05D004774 ORTHO05D005514 1.4e-09 66.2 49 67.3
BolC8t52628H Brassica oleracea HOM05D004774 ORTHO05D005514 1.4e-09 66.2 49 67.3
BraA04t17771Z Brassica rapa HOM05D037327 ORTHO05D041949 7.0e-09 63.9 35 85.7
A08p35880 Brassica napus HOM05D004774 ORTHO05D005514 9.2e-09 63.5 47 63.8
BraA08t35495Z Brassica rapa HOM05D004774 ORTHO05D005514 9.2e-09 63.5 47 63.8
C08p02690 Brassica napus HOM05D004774 ORTHO05D005514 1.2e-08 63.2 47 63.8
BolC8t47065H Brassica oleracea HOM05D004774 ORTHO05D005514 1.2e-08 63.2 47 63.8
BolC8t46832H Brassica oleracea HOM05D004774 ORTHO05D005514 2.7e-08 62.0 66 57.6
BolC1t02432H Brassica oleracea HOM05D004774 ORTHO05D033846 3.5e-08 61.6 67 56.7
Sp1g05530 Schrenkiella parvula HOM05D004774 ORTHO05D005514 4.5e-08 61.2 50 58.0
C08p41270 Brassica napus HOM05D004774 ORTHO05D005514 7.8e-08 60.5 67 55.2
CARHR006490 Cardamine hirsuta HOM05D004774 ORTHO05D005514 7.8e-08 60.5 53 56.6
AL1G16800 Arabidopsis lyrata HOM05D004774 ORTHO05D005514 1.0e-07 60.1 50 58.0
Carub.0001s0611 Capsella rubella HOM05D004774 ORTHO05D005514 2.3e-07 58.9 37 67.6
Atru.chr5.1584 Acer truncatum HOM05D004774 ORTHO05D005514 3.9e-07 58.2 40 60.0
Thhalv10028967m.g Eutrema salsugineum HOM05D004774 ORTHO05D005514 8.6e-07 57.0 50 54.0
CiPaw.06G137100 Carya illinoinensis HOM05D004774 ORTHO05D005514 1.5e-06 56.2 43 53.5
Cfa005024 Carpinus fangiana HOM05D004774 ORTHO05D005514 5.6e-06 54.3 40 57.5
COL.COLO4_05101 Corchorus olitorius HOM05D004774 ORTHO05D005514 5.6e-06 54.3 41 56.1
Gohir.A07G209300 Gossypium hirsutum HOM05D004774 ORTHO05D005514 5.6e-06 54.3 46 52.2
Gohir.D07G215400 Gossypium hirsutum HOM05D004774 ORTHO05D005514 5.6e-06 54.3 46 52.2
Gorai.001G243200 Gossypium raimondii HOM05D004774 ORTHO05D005514 5.6e-06 54.3 46 52.2
A04p22070 Brassica napus HOM05D037327 ORTHO05D041949 7.3e-06 53.9 26 88.5
Aa31LG1G7840 Aethionema arabicum HOM05D004480 ORTHO05D005546 9.5e-06 53.5 53 49.1


User provided reference genes

Program Settings