Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p57570 Brassica napus HOM05D001239 ORTHO05D011709 1.1e-65 253.1 124 100.0
C09p49690 Brassica napus HOM05D001239 ORTHO05D011709 2.8e-32 142.1 120 62.5
BolC4t26715H Brassica oleracea HOM05D001239 ORTHO05D011709 5.0e-13 78.2 90 50.0
BcaB07g30912 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-12 76.3 114 43.0
BcaC05g27311 Brassica carinata HOM05D001239 ORTHO05D011709 2.5e-12 75.9 93 49.5
BraA09t38523Z Brassica rapa HOM05D027742 ORTHO05D027054 2.5e-12 75.9 83 53.0
C09p42620 Brassica napus HOM05D001239 ORTHO05D011709 5.5e-12 74.7 112 49.1
C04p52150 Brassica napus HOM05D027742 ORTHO05D027054 9.4e-12 73.9 110 43.6
BcaC05g25304 Brassica carinata HOM05D000508 ORTHO05D000371 1.2e-11 73.6 89 48.3
C04p30980 Brassica napus HOM05D001035 ORTHO05D021752 2.7e-11 72.4 107 45.8
BcaB07g33550 Brassica carinata HOM05D001239 ORTHO05D011709 3.6e-11 72.0 81 54.3
C05p11830 Brassica napus HOM05D001239 ORTHO05D033080 4.7e-11 71.6 117 41.0
BolC5t30244H Brassica oleracea HOM05D001239 ORTHO05D011709 8.0e-11 70.9 119 42.0
BraA04t17766Z Brassica rapa HOM05D001239 ORTHO05D024427 5.2e-10 68.2 115 36.5
C01p30110 Brassica napus HOM05D001239 ORTHO05D023908 8.8e-10 67.4 120 40.0
BcaB03g11924 Brassica carinata HOM05D001239 ORTHO05D011709 3.4e-09 65.5 63 57.1
BcaC04g19167 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-09 65.5 115 37.4
BcaC04g22862 Brassica carinata HOM05D000496 ORTHO05D000411 7.5e-09 64.3 114 37.7
BolC2t10713H Brassica oleracea HOM05D001239 ORTHO05D011709 9.8e-09 63.9 127 38.6
BcaB01g01785 Brassica carinata HOM05D000496 ORTHO05D000925 1.3e-08 63.5 114 38.6
BcaC02g09195 Brassica carinata HOM05D001239 ORTHO05D031919 1.3e-08 63.5 51 62.7
BraA01t01837Z Brassica rapa HOM05D014076 ORTHO05D021903 2.2e-08 62.8 148 33.1
C08p07070 Brassica napus HOM05D001239 ORTHO05D024427 4.9e-08 61.6 140 36.4
BolC8t47551H Brassica oleracea HOM05D001239 ORTHO05D024427 4.9e-08 61.6 101 42.6
BcaC01g02173 Brassica carinata HOM05D001239 ORTHO05D017499 8.3e-08 60.8 110 39.1
BraA09t38239Z Brassica rapa HOM05D014076 ORTHO05D021903 1.1e-07 60.5 138 39.1
BolC2t08478H Brassica oleracea HOM05D001239 ORTHO05D024427 1.4e-07 60.1 122 35.2
C03p49130 Brassica napus HOM05D014076 ORTHO05D024532 1.8e-07 59.7 97 42.3
BcaC03g14187 Brassica carinata HOM05D001239 ORTHO05D011709 2.4e-07 59.3 55 61.8
C03p67910 Brassica napus HOM05D001239 ORTHO05D017499 3.1e-07 58.9 110 38.2
BolC3t17197H Brassica oleracea HOM05D014076 ORTHO05D024532 3.1e-07 58.9 58 55.2
BcaC06g36045 Brassica carinata HOM05D000496 ORTHO05D000411 5.4e-07 58.2 133 35.3
A10p08920 Brassica napus HOM05D001239 ORTHO05D011709 5.4e-07 58.2 75 50.7
BcaC02g11658 Brassica carinata HOM05D014076 ORTHO05D021903 7.0e-07 57.8 148 33.8
BcaC09g49677 Brassica carinata HOM05D000496 ORTHO05D011709 1.2e-06 57.0 120 36.7
BcaB04g18066 Brassica carinata HOM05D001239 ORTHO05D023908 1.6e-06 56.6 52 53.8
A01p18960 Brassica napus HOM05D014076 ORTHO05D021903 1.6e-06 56.6 148 33.1
C07p05770 Brassica napus HOM05D001239 ORTHO05D011709 2.7e-06 55.8 41 65.9
CARHR154060 Cardamine hirsuta HOM05D001239 ORTHO05D011709 2.7e-06 55.8 60 55.0
BcaC01g03871 Brassica carinata HOM05D001239 ORTHO05D011709 3.5e-06 55.5 98 40.8
BcaC07g40131 Brassica carinata HOM05D014076 ORTHO05D000006 3.5e-06 55.5 144 36.8
A06p35270 Brassica napus HOM05D000591 ORTHO05D000579 4.5e-06 55.1 90 43.3
BcaB01g02634 Brassica carinata HOM05D000496 ORTHO05D000411 7.7e-06 54.3 114 35.1
C03p49160 Brassica napus HOM05D014076 ORTHO05D024532 7.7e-06 54.3 126 34.9


User provided reference genes

Program Settings