Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p51740 Brassica napus HOM05D001738 ORTHO05D001644 5.8e-92 340.9 174 100.0
BolC2t11259H Brassica oleracea HOM05D001738 ORTHO05D001644 1.9e-71 272.7 154 94.2
A02p32990 Brassica napus HOM05D001738 ORTHO05D001644 3.3e-39 165.6 163 61.3
BraA02t08324Z Brassica rapa HOM05D001738 ORTHO05D001644 3.3e-39 165.6 163 61.3
BcaB07g30292 Brassica carinata HOM05D001738 ORTHO05D001644 7.0e-37 157.9 159 62.3
BcaC03g17149 Brassica carinata HOM05D001738 ORTHO05D001644 3.7e-30 135.6 161 55.3
BcaC03g17152 Brassica carinata HOM05D001738 ORTHO05D001644 3.7e-30 135.6 161 55.3
C02p51750 Brassica napus HOM05D001738 ORTHO05D001644 2.0e-28 129.8 103 72.8
BolC2t11152H Brassica oleracea HOM05D001738 ORTHO05D001644 6.1e-25 118.2 161 49.7
BolC8t52365H Brassica oleracea HOM05D001738 ORTHO05D001644 2.3e-24 116.3 148 52.7
AL1G22320 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 1.3e-19 100.5 161 45.3
BcaNung06201 Brassica carinata HOM05D001738 ORTHO05D001644 1.5e-18 97.1 154 44.8
C08p48460 Brassica napus HOM05D001738 ORTHO05D001644 3.3e-18 95.9 154 44.2
Carub.0001s1342 Capsella rubella HOM05D001738 ORTHO05D001644 3.3e-18 95.9 161 45.3
A08p15080 Brassica napus HOM05D001738 ORTHO05D001644 4.7e-17 92.0 142 44.4
BraA08t33488Z Brassica rapa HOM05D001738 ORTHO05D001644 4.7e-17 92.0 142 44.4
AL1G25470 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 6.1e-17 91.7 152 43.4
BcaB08g37391 Brassica carinata HOM05D001738 ORTHO05D001644 1.0e-16 90.9 147 44.2
BolC3t20600H Brassica oleracea HOM05D001738 ORTHO05D001644 1.4e-16 90.5 150 42.0
BcaB03g11687 Brassica carinata HOM05D001738 ORTHO05D001644 5.2e-16 88.6 157 41.4
AL4G18870 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 8.9e-16 87.8 152 41.4
BcaNung02775 Brassica carinata HOM05D001738 ORTHO05D001644 1.2e-15 87.4 155 40.6
A01p12930 Brassica napus HOM05D001738 ORTHO05D001644 9.8e-15 84.3 148 39.9
BraA01t01237Z Brassica rapa HOM05D001738 ORTHO05D001644 9.8e-15 84.3 148 39.9
A10p21580 Brassica napus HOM05D001738 ORTHO05D001644 1.7e-14 83.6 164 40.2
AL5G16800 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 2.2e-14 83.2 157 42.0
Thhalv10010027m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 4.9e-14 82.0 140 43.6
AT1G11270 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 6.4e-14 81.6 154 41.6
BcaB08g36707 Brassica carinata HOM05D001738 ORTHO05D001644 8.3e-14 81.3 151 41.7
CARHR011460 Cardamine hirsuta HOM05D001738 ORTHO05D001644 1.1e-13 80.9 137 38.7
AL4G30220 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 1.4e-13 80.5 148 42.6
BcaC01g01546 Brassica carinata HOM05D001738 ORTHO05D001644 1.4e-13 80.5 150 42.0
BraA10t44220Z Brassica rapa HOM05D001738 ORTHO05D001644 1.4e-13 80.5 156 41.7
BcaC04g18725 Brassica carinata HOM05D001738 ORTHO05D001644 1.8e-13 80.1 152 42.1
AL8G23030 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 3.2e-13 79.3 152 44.1
BolC3t21603H Brassica oleracea HOM05D001738 ORTHO05D001644 3.2e-13 79.3 149 41.6
A09p64540 Brassica napus HOM05D001738 ORTHO05D001644 4.1e-13 79.0 152 38.8
BraA09t41803Z Brassica rapa HOM05D001738 ORTHO05D001644 4.1e-13 79.0 152 38.8
AL1G43860 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 7.0e-13 78.2 144 41.7
BcaB04g18150 Brassica carinata HOM05D001738 ORTHO05D001644 7.0e-13 78.2 85 56.5
BcaB04g18152 Brassica carinata HOM05D001738 ORTHO05D001644 7.0e-13 78.2 85 56.5
BraA09t41808Z Brassica rapa HOM05D001738 ORTHO05D001644 9.2e-13 77.8 142 39.4
CARHR292150 Cardamine hirsuta HOM05D001738 ORTHO05D001644 1.2e-12 77.4 138 38.4
A09p64880 Brassica napus HOM05D001738 ORTHO05D001644 2.0e-12 76.6 142 38.7
Thhalv10021998m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 2.7e-12 76.3 142 39.4
A09p64890 Brassica napus HOM05D001738 ORTHO05D001644 4.6e-12 75.5 140 39.3
Thhalv10000283m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 4.6e-12 75.5 152 40.1
AL1G23150 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 6.0e-12 75.1 160 37.5
CARHR119930 Cardamine hirsuta HOM05D001738 ORTHO05D001644 6.0e-12 75.1 157 36.9
BcaNung02915 Brassica carinata HOM05D001738 ORTHO05D001644 7.8e-12 74.7 83 57.8
Carub.0345s0001 Capsella rubella HOM05D001738 ORTHO05D001644 7.8e-12 74.7 151 41.1
CARHR024930 Cardamine hirsuta HOM05D001738 ORTHO05D001644 7.8e-12 74.7 137 38.0
AT2G34280 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 1.0e-11 74.3 148 41.9
A09p64530 Brassica napus HOM05D001738 ORTHO05D001644 1.3e-11 73.9 140 38.6
C01p46040 Brassica napus HOM05D001738 ORTHO05D001644 1.3e-11 73.9 164 36.6
BraA09t41802Z Brassica rapa HOM05D001738 ORTHO05D001644 1.3e-11 73.9 140 38.6
C08p16640 Brassica napus HOM05D001738 ORTHO05D001644 1.7e-11 73.6 136 40.4
C09p55670 Brassica napus HOM05D001738 ORTHO05D001644 1.7e-11 73.6 137 38.7
BcaC09g48787 Brassica carinata HOM05D001738 ORTHO05D001644 3.9e-11 72.4 150 37.3
C04p12640 Brassica napus HOM05D001738 ORTHO05D001644 3.9e-11 72.4 151 36.4
BolC1t04554H Brassica oleracea HOM05D001738 ORTHO05D001644 3.9e-11 72.4 150 37.3
Carub.0006s1692 Capsella rubella HOM05D001738 ORTHO05D001644 3.9e-11 72.4 140 40.0
Aa31sc18G20 Aethionema arabicum HOM05D001738 ORTHO05D001644 5.0e-11 72.0 160 39.4
Thhalv10009873m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 1.1e-10 70.9 155 35.5
BcaC04g20153 Brassica carinata HOM05D001738 ORTHO05D001644 1.5e-10 70.5 151 36.4
A01p36040 Brassica napus HOM05D001738 ORTHO05D001644 1.9e-10 70.1 159 36.5
BraA01t03683Z Brassica rapa HOM05D001738 ORTHO05D001644 1.9e-10 70.1 159 36.5
Thhalv10007821m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 1.9e-10 70.1 156 35.9
BraA01t03696Z Brassica rapa HOM05D001738 ORTHO05D001644 2.5e-10 69.7 162 37.7
Thhalv10009680m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 3.3e-10 69.3 144 35.4
AL1G22300 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 4.3e-10 68.9 164 34.8
CARHR008650 Cardamine hirsuta HOM05D001738 ORTHO05D001644 4.3e-10 68.9 140 39.3
BcaB07g32397 Brassica carinata HOM05D001738 ORTHO05D001644 5.6e-10 68.6 137 40.1
A01p36210 Brassica napus HOM05D001738 ORTHO05D001644 5.6e-10 68.6 160 36.2
AL5G25310 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 9.5e-10 67.8 140 38.6
AL5G38790 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 9.5e-10 67.8 154 31.2
C03p92980 Brassica napus HOM05D001738 ORTHO05D001644 1.2e-09 67.4 74 54.1
Thhalv10017550m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 1.2e-09 67.4 68 58.8
AL6G20830 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 2.8e-09 66.2 149 38.3
AT5G10340 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 2.8e-09 66.2 151 33.8
Sp1g27610 Schrenkiella parvula HOM05D001738 ORTHO05D001644 3.6e-09 65.9 146 36.3
BcaNung02774 Brassica carinata HOM05D001541 ORTHO05D001644 4.7e-09 65.5 75 49.3
BolC5t31053H Brassica oleracea HOM05D001738 ORTHO05D001644 4.7e-09 65.5 85 52.9
AL1G37130 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 8.0e-09 64.7 57 61.4
C07p40890 Brassica napus HOM05D001738 ORTHO05D001644 8.0e-09 64.7 149 36.2
BolC7t44617H Brassica oleracea HOM05D001738 ORTHO05D001644 8.0e-09 64.7 149 36.2
C05p23430 Brassica napus HOM05D001738 ORTHO05D001644 1.1e-08 64.3 148 39.2
AL6G27180 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 1.8e-08 63.5 84 51.2
BcaNung02452 Brassica carinata HOM05D001738 ORTHO05D001644 1.8e-08 63.5 149 35.6
A09p64740 Brassica napus HOM05D001738 ORTHO05D001644 1.8e-08 63.5 93 48.4
AL7G46450 Arabidopsis lyrata HOM05D000626 ORTHO05D001644 2.3e-08 63.2 57 59.6
AL5G38780 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 4.0e-08 62.4 149 30.9
BolC8t52384H Brassica oleracea HOM05D001738 ORTHO05D001644 4.0e-08 62.4 145 36.6
Carub.0006s0880 Capsella rubella HOM05D001738 ORTHO05D001644 4.0e-08 62.4 161 37.3
Thhalv10009459m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 4.0e-08 62.4 101 42.6
Aa31LG8G6310 Aethionema arabicum HOM05D001738 ORTHO05D001644 5.2e-08 62.0 160 37.5
AT1G09650 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 6.8e-08 61.6 145 36.6
A06p37470 Brassica napus HOM05D001738 ORTHO05D001644 6.8e-08 61.6 149 35.6
AL1G22350 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 8.9e-08 61.2 143 37.1
A06p37480 Brassica napus HOM05D001738 ORTHO05D001644 8.9e-08 61.2 130 38.5
BraA06t26672Z Brassica rapa HOM05D001738 ORTHO05D001644 8.9e-08 61.2 130 38.5
CARHR125660 Cardamine hirsuta HOM05D001738 ORTHO05D001644 8.9e-08 61.2 145 37.9
BraA09t39559Z Brassica rapa HOM05D001738 ORTHO05D001644 1.2e-07 60.8 138 39.1
CARHR125670 Cardamine hirsuta HOM05D001738 ORTHO05D001644 1.2e-07 60.8 144 36.1
AL1G20200 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 1.5e-07 60.5 84 48.8
BcaC05g26332 Brassica carinata HOM05D001738 ORTHO05D001644 1.5e-07 60.5 135 36.3
BolC5t31054H Brassica oleracea HOM05D001738 ORTHO05D001644 2.0e-07 60.1 144 36.8
Aa31LG8G6350 Aethionema arabicum HOM05D001738 ORTHO05D001644 2.6e-07 59.7 148 31.1
A08p05820 Brassica napus HOM05D001738 ORTHO05D001644 2.6e-07 59.7 113 38.1
C05p47410 Brassica napus HOM05D001738 ORTHO05D001644 2.6e-07 59.7 113 38.1
BraA08t32583Z Brassica rapa HOM05D001738 ORTHO05D001644 2.6e-07 59.7 113 38.1
CARHR124000 Cardamine hirsuta HOM05D001738 ORTHO05D001644 2.6e-07 59.7 149 37.6
Thhalv10012265m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 3.4e-07 59.3 139 36.7
Thhalv10028312m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 3.4e-07 59.3 75 45.3
BcaC04g21963 Brassica carinata HOM05D001738 ORTHO05D001644 4.4e-07 58.9 162 34.6
C05p47550 Brassica napus HOM05D001738 ORTHO05D001644 4.4e-07 58.9 76 46.1
BcaC05g28635 Brassica carinata HOM05D001738 ORTHO05D001644 5.8e-07 58.5 104 40.4
BolC5t33468H Brassica oleracea HOM05D001738 ORTHO05D001644 5.8e-07 58.5 104 40.4
Aa31LG8G6340 Aethionema arabicum HOM05D001738 ORTHO05D001644 7.5e-07 58.2 136 30.1
BcaB03g13098 Brassica carinata HOM05D001738 ORTHO05D001644 7.5e-07 58.2 65 52.3
BcaB07g33225 Brassica carinata HOM05D001738 ORTHO05D001644 7.5e-07 58.2 149 34.2
BcaB08g36508 Brassica carinata HOM05D001738 ORTHO05D001644 7.5e-07 58.2 58 51.7
BcaC05g28686 Brassica carinata HOM05D001738 ORTHO05D001644 7.5e-07 58.2 76 46.1
BolC5t33533H Brassica oleracea HOM05D001738 ORTHO05D001644 7.5e-07 58.2 76 46.1
BolC5t33542H Brassica oleracea HOM05D001738 ORTHO05D001644 7.5e-07 58.2 76 46.1
Carub.0005s2405 Capsella rubella HOM05D001738 ORTHO05D001644 7.5e-07 58.2 169 29.0
Thhalv10016004m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 7.5e-07 58.2 172 33.1
A09p40630 Brassica napus HOM05D001738 ORTHO05D001644 9.8e-07 57.8 136 39.0
Carub.0001s1404 Capsella rubella HOM05D001738 ORTHO05D001644 9.8e-07 57.8 149 31.5
BraA05t21436Z Brassica rapa HOM05D001738 ORTHO05D001644 1.3e-06 57.4 76 46.1
Thhalv10017844m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 1.3e-06 57.4 148 31.8
C09p25430 Brassica napus HOM05D001738 ORTHO05D001644 1.7e-06 57.0 151 32.5
Carub.0008s0923 Capsella rubella HOM05D001738 ORTHO05D001644 1.7e-06 57.0 140 36.4
Thhalv10028258m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 1.7e-06 57.0 150 31.3
Carub.0001s2401 Capsella rubella HOM05D001738 ORTHO05D001644 2.2e-06 56.6 62 51.6
Thhalv10003053m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 2.2e-06 56.6 136 35.3
AT1G14315 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 2.9e-06 56.2 144 31.9
CARHR211720 Cardamine hirsuta HOM05D001738 ORTHO05D001644 2.9e-06 56.2 151 31.8
BcaC05g25187 Brassica carinata HOM05D001738 ORTHO05D001644 3.7e-06 55.8 51 56.9
A09p40640 Brassica napus HOM05D001738 ORTHO05D001644 3.7e-06 55.8 60 58.3
CARHR168120 Cardamine hirsuta HOM05D001738 ORTHO05D001644 3.7e-06 55.8 157 29.3
BcaC01g00689 Brassica carinata HOM05D001738 ORTHO05D001644 4.9e-06 55.5 148 35.1
BcaC02g11659 Brassica carinata HOM05D001738 ORTHO05D001644 4.9e-06 55.5 131 32.1
BcaC05g26334 Brassica carinata HOM05D001738 ORTHO05D001644 6.4e-06 55.1 84 48.8
C02p03830 Brassica napus HOM05D001738 ORTHO05D001644 6.4e-06 55.1 172 32.6
BraA08t35119Z Brassica rapa HOM05D001738 ORTHO05D001644 6.4e-06 55.1 84 45.2
AL5G14020 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 8.3e-06 54.7 153 32.0
AT5G16285 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 8.3e-06 54.7 65 52.3


User provided reference genes

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