Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p51700 Brassica napus HOM05D009656 ORTHO05D011940 1.4e-65 253.4 193 100.0
BcaC03g17233 Brassica carinata HOM05D009656 ORTHO05D011940 3.9e-65 251.9 193 99.5
C02p51680 Brassica napus HOM05D009656 ORTHO05D011940 3.9e-65 251.9 193 99.5
BolC2t11254H Brassica oleracea HOM05D009656 ORTHO05D011940 3.9e-65 251.9 193 99.5
A02p33560 Brassica napus HOM05D009656 ORTHO05D011940 7.0e-62 241.1 193 96.9
BraA02t08377Z Brassica rapa HOM05D009656 ORTHO05D011940 7.0e-62 241.1 193 96.9
BcaB07g30284 Brassica carinata HOM05D009656 ORTHO05D011940 3.2e-59 232.3 193 86.5
Sp2g14560 Schrenkiella parvula HOM05D009656 ORTHO05D011940 3.1e-46 189.1 145 72.4
CARHR146250 Cardamine hirsuta HOM05D009656 ORTHO05D011940 3.0e-41 172.6 146 64.4
CARHR146130 Cardamine hirsuta HOM05D009656 ORTHO05D011940 8.3e-39 164.5 143 71.3
Thhalv10004969m.g Eutrema salsugineum HOM05D009656 ORTHO05D011940 1.0e-36 157.5 115 72.2
AT2G03740 Arabidopsis thaliana HOM05D009656 ORTHO05D011940 8.0e-34 147.9 115 68.7
AL5G13530 Arabidopsis lyrata HOM05D009656 ORTHO05D011940 4.0e-33 145.6 115 67.8
Thhalv10004937m.g Eutrema salsugineum HOM05D009656 ORTHO05D011940 8.9e-33 144.4 113 67.3
AL5G13670 Arabidopsis lyrata HOM05D009656 ORTHO05D011940 5.7e-32 141.7 117 67.5
Sp2g14570 Schrenkiella parvula HOM05D009656 ORTHO05D011940 7.5e-32 141.4 129 60.5
AT2G03850 Arabidopsis thaliana HOM05D009656 ORTHO05D011940 1.1e-30 137.5 118 61.9
Carub.0005s0288 Capsella rubella HOM05D009656 ORTHO05D011940 1.1e-30 137.5 116 63.8
C07p34100 Brassica napus HOM05D009656 ORTHO05D011940 4.6e-29 132.1 118 61.9
BolC7t43924H Brassica oleracea HOM05D009656 ORTHO05D011940 4.6e-29 132.1 118 61.9
Carub.0005s0301 Capsella rubella HOM05D009656 ORTHO05D011940 6.6e-28 128.3 146 52.7
A06p42920 Brassica napus HOM05D009656 ORTHO05D011940 3.3e-27 125.9 148 58.1
BcaC06g31167 Brassica carinata HOM05D009656 ORTHO05D011940 7.3e-27 124.8 118 60.2
BcaC06g31156 Brassica carinata HOM05D009656 ORTHO05D011940 9.8e-16 87.8 59 69.5
Aa31LG1G24350 Aethionema arabicum HOM05D009656 ORTHO05D011940 8.6e-12 74.7 96 47.9
Sp4g24660 Schrenkiella parvula HOM05D010227 ORTHO05D012306 2.9e-07 59.7 117 39.3
AT2G42530 Arabidopsis thaliana HOM05D010227 ORTHO05D012306 9.2e-06 54.7 115 39.1


User provided reference genes

Program Settings