Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g17233 Brassica carinata HOM05D009656 ORTHO05D011940 7.9e-66 254.2 193 100.0
C02p51680 Brassica napus HOM05D009656 ORTHO05D011940 7.9e-66 254.2 193 100.0
BolC2t11254H Brassica oleracea HOM05D009656 ORTHO05D011940 7.9e-66 254.2 193 100.0
C02p51700 Brassica napus HOM05D009656 ORTHO05D011940 2.3e-65 252.7 193 99.5
A02p33560 Brassica napus HOM05D009656 ORTHO05D011940 1.4e-62 243.4 193 97.4
BraA02t08377Z Brassica rapa HOM05D009656 ORTHO05D011940 1.4e-62 243.4 193 97.4
BcaB07g30284 Brassica carinata HOM05D009656 ORTHO05D011940 6.5e-60 234.6 193 87.0
Sp2g14560 Schrenkiella parvula HOM05D009656 ORTHO05D011940 6.3e-47 191.4 145 73.1
CARHR146250 Cardamine hirsuta HOM05D009656 ORTHO05D011940 6.1e-42 174.9 146 65.1
CARHR146130 Cardamine hirsuta HOM05D009656 ORTHO05D011940 1.7e-39 166.8 143 72.0
Thhalv10004969m.g Eutrema salsugineum HOM05D009656 ORTHO05D011940 2.0e-37 159.8 115 73.0
AT2G03740 Arabidopsis thaliana HOM05D009656 ORTHO05D011940 1.6e-34 150.2 115 69.6
AL5G13530 Arabidopsis lyrata HOM05D009656 ORTHO05D011940 8.0e-34 147.9 115 68.7
Thhalv10004937m.g Eutrema salsugineum HOM05D009656 ORTHO05D011940 2.3e-33 146.4 113 68.1
AL5G13670 Arabidopsis lyrata HOM05D009656 ORTHO05D011940 1.2e-32 144.1 117 68.4
Sp2g14570 Schrenkiella parvula HOM05D009656 ORTHO05D011940 1.5e-32 143.7 129 61.2
AT2G03850 Arabidopsis thaliana HOM05D009656 ORTHO05D011940 2.2e-31 139.8 118 62.7
Carub.0005s0288 Capsella rubella HOM05D009656 ORTHO05D011940 2.8e-31 139.4 116 63.8
C07p34100 Brassica napus HOM05D009656 ORTHO05D011940 9.2e-30 134.4 118 62.7
BolC7t43924H Brassica oleracea HOM05D009656 ORTHO05D011940 9.2e-30 134.4 118 62.7
Carub.0005s0301 Capsella rubella HOM05D009656 ORTHO05D011940 1.3e-28 130.6 146 52.7
A06p42920 Brassica napus HOM05D009656 ORTHO05D011940 8.6e-28 127.9 148 58.8
BcaC06g31167 Brassica carinata HOM05D009656 ORTHO05D011940 1.5e-27 127.1 118 61.0
BcaC06g31156 Brassica carinata HOM05D009656 ORTHO05D011940 7.5e-16 88.2 59 69.5
Aa31LG1G24350 Aethionema arabicum HOM05D009656 ORTHO05D011940 2.3e-12 76.6 96 47.9
Sp4g24660 Schrenkiella parvula HOM05D010227 ORTHO05D012306 1.3e-07 60.8 117 39.3
AT2G42530 Arabidopsis thaliana HOM05D010227 ORTHO05D012306 3.2e-06 56.2 115 39.1
AL4G41070 Arabidopsis lyrata HOM05D010227 ORTHO05D012306 4.1e-06 55.8 115 38.3
Thhalv10017393m.g Eutrema salsugineum HOM05D010227 ORTHO05D012306 7.1e-06 55.1 117 36.8


User provided reference genes

Program Settings