Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p50530 Brassica napus HOM05D000067 ORTHO05D000280 6.5e-24 113.2 57 100.0
BcaB07g30253 Brassica carinata HOM05D000067 ORTHO05D000280 7.9e-14 79.7 56 76.8
A06p42460 Brassica napus HOM05D000067 ORTHO05D000280 5.1e-13 77.0 56 71.4
BraA06t27161Z Brassica rapa HOM05D000067 ORTHO05D000280 5.1e-13 77.0 56 71.4
BcaC06g31115 Brassica carinata HOM05D000067 ORTHO05D000280 6.7e-13 76.6 56 75.0
BcaC06g31113 Brassica carinata HOM05D000067 ORTHO05D000280 1.1e-12 75.9 56 69.6
Sp2g15060 Schrenkiella parvula HOM05D000067 ORTHO05D000280 1.1e-12 75.9 56 75.0
BcaC06g33952 Brassica carinata HOM05D000067 ORTHO05D000280 1.5e-12 75.5 56 73.2
C07p34830 Brassica napus HOM05D000067 ORTHO05D000280 1.5e-12 75.5 56 73.2
Carub.0005s0364 Capsella rubella HOM05D000067 ORTHO05D000280 2.5e-12 74.7 56 71.4
A06p42470 Brassica napus HOM05D000067 ORTHO05D000280 3.3e-12 74.3 56 69.6
C07p34710 Brassica napus HOM05D000067 ORTHO05D000280 4.3e-12 73.9 56 71.4
BolC7t44002H Brassica oleracea HOM05D000067 ORTHO05D000280 4.3e-12 73.9 56 71.4
BcaC06g33950 Brassica carinata HOM05D000067 ORTHO05D000280 7.4e-12 73.2 56 67.9
BolC7t44017H Brassica oleracea HOM05D000067 ORTHO05D000280 7.4e-12 73.2 56 67.9
AL5G14410 Arabidopsis lyrata HOM05D000067 ORTHO05D000280 9.7e-12 72.8 56 71.4
AL5G14430 Arabidopsis lyrata HOM05D000067 ORTHO05D000280 9.7e-12 72.8 56 69.6
AT3G25810 Arabidopsis thaliana HOM05D000067 ORTHO05D000280 9.7e-12 72.8 56 71.4
A06p42490 Brassica napus HOM05D000067 ORTHO05D000280 9.7e-12 72.8 56 71.4
BolC7t44010H Brassica oleracea HOM05D000067 ORTHO05D000280 9.7e-12 72.8 56 71.4
AT3G25830 Arabidopsis thaliana HOM05D000067 ORTHO05D000280 1.7e-11 72.0 55 72.7
BcaB01g02987 Brassica carinata HOM05D000067 ORTHO05D000280 3.7e-11 70.9 56 64.3
C07p34850 Brassica napus HOM05D000067 ORTHO05D000280 3.7e-11 70.9 56 62.5
BcaC07g40951 Brassica carinata HOM05D000067 ORTHO05D000280 8.2e-11 69.7 56 69.6
C08p39430 Brassica napus HOM05D000067 ORTHO05D000280 8.2e-11 69.7 56 69.6
BolC8t51517H Brassica oleracea HOM05D000067 ORTHO05D000280 8.2e-11 69.7 56 69.6
CARHR146780 Cardamine hirsuta HOM05D000067 ORTHO05D000280 8.2e-11 69.7 56 67.9
BraA09t41039Z Brassica rapa HOM05D000266 ORTHO05D009023 1.8e-10 68.6 56 69.6
Carub.0004s0348 Capsella rubella HOM05D000067 ORTHO05D000280 1.8e-10 68.6 56 64.3
C03p35270 Brassica napus HOM05D000067 ORTHO05D000280 4.1e-10 67.4 56 58.9
BcaB01g02729 Brassica carinata HOM05D000067 ORTHO05D000280 5.3e-10 67.0 56 58.9
C03p32690 Brassica napus HOM05D000067 ORTHO05D000280 5.3e-10 67.0 56 60.7
BolC3t15605H Brassica oleracea HOM05D000067 ORTHO05D000280 5.3e-10 67.0 56 60.7
Aa31LG9G12160 Aethionema arabicum HOM05D000067 ORTHO05D000280 6.9e-10 66.6 56 64.3
AT2G24210 Arabidopsis thaliana HOM05D000067 ORTHO05D000280 6.9e-10 66.6 56 62.5
BcaC01g04653 Brassica carinata HOM05D000067 ORTHO05D000280 6.9e-10 66.6 56 58.9
A03p29230 Brassica napus HOM05D000067 ORTHO05D000280 6.9e-10 66.6 56 58.9
BolC3t15838H Brassica oleracea HOM05D000067 ORTHO05D000280 6.9e-10 66.6 56 58.9
BraA03t12118Z Brassica rapa HOM05D000067 ORTHO05D000280 6.9e-10 66.6 56 58.9
Aa31LG2G6530 Aethionema arabicum HOM05D000067 ORTHO05D000280 9.1e-10 66.2 56 62.5
THA.LOC104805843 Tarenaya hassleriana HOM05D000067 ORTHO05D000280 9.1e-10 66.2 55 63.6
CARHR117940 Cardamine hirsuta HOM05D000067 ORTHO05D000280 1.5e-09 65.5 56 60.7
A03p27200 Brassica napus HOM05D000067 ORTHO05D000280 2.0e-09 65.1 56 58.9
BraA03t11933Z Brassica rapa HOM05D000067 ORTHO05D000280 2.0e-09 65.1 56 58.9
THA.LOC104805844 Tarenaya hassleriana HOM05D000067 ORTHO05D000280 3.4e-09 64.3 56 62.5
THA.LOC104809235 Tarenaya hassleriana HOM05D000067 ORTHO05D000280 3.4e-09 64.3 55 52.7
Aa31LG9G12150 Aethionema arabicum HOM05D000067 ORTHO05D000280 5.9e-09 63.5 56 60.7
AL4G14420 Arabidopsis lyrata HOM05D000067 ORTHO05D000280 5.0e-08 60.5 56 58.9
THA.LOC104816938 Tarenaya hassleriana HOM05D000067 ORTHO05D000280 1.1e-07 59.3 56 55.4
THA.LOC104813173 Tarenaya hassleriana HOM05D000067 ORTHO05D000280 1.9e-07 58.5 56 53.6
Thecc.01G120100 Theobroma cacao HOM05D000067 ORTHO05D000280 2.5e-07 58.2 56 57.1
Aa31sc250G90 Aethionema arabicum HOM05D000067 ORTHO05D000280 3.2e-07 57.8 56 55.4
Sabra16G0193900 Salix brachista HOM05D000067 ORTHO05D000280 3.2e-07 57.8 47 59.6
Sabra16G0194300 Salix brachista HOM05D000067 ORTHO05D000280 3.2e-07 57.8 47 59.6
Thecc.03G282600 Theobroma cacao HOM05D000067 ORTHO05D000280 3.2e-07 57.8 47 61.7
Atru.chr10.1302 Acer truncatum HOM05D000067 ORTHO05D000280 4.2e-07 57.4 47 57.4
PSO732G0093 Papaver somniferum HOM05D000067 ORTHO05D000280 5.5e-07 57.0 54 51.9
BcaC01g04882 Brassica carinata HOM05D000067 ORTHO05D000280 7.2e-07 56.6 48 62.5
Duzib147G0494 Durio zibethinus HOM05D000067 ORTHO05D000280 7.2e-07 56.6 51 54.9
Manes.12G148666 Manihot esculenta HOM05D000067 ORTHO05D000280 9.4e-07 56.2 46 58.7
Gohir.D05G338440 Gossypium hirsutum HOM05D000067 ORTHO05D000280 1.2e-06 55.8 56 48.2
Gorai.009G363000 Gossypium raimondii HOM05D000067 ORTHO05D000280 1.2e-06 55.8 56 48.2
Gorai.009G363300 Gossypium raimondii HOM05D000067 ORTHO05D000280 1.6e-06 55.5 56 50.0
CSS0025755 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000280 2.1e-06 55.1 45 64.4
Cc02_g35640 Coffea canephora HOM05D000067 ORTHO05D000280 2.1e-06 55.1 47 57.4
Nitab4.5_0006287g0020 Nicotiana tabacum HOM05D000067 ORTHO05D000280 2.1e-06 55.1 56 53.6
Solyc01g105880.4 Solanum lycopersicum HOM05D000067 ORTHO05D000280 2.1e-06 55.1 56 55.4
Sopen01g048310 Solanum pennellii HOM05D000067 ORTHO05D000280 2.1e-06 55.1 56 55.4
AT4G16740 Arabidopsis thaliana HOM05D000067 ORTHO05D000280 2.7e-06 54.7 56 53.6
CSS0044956 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000280 3.6e-06 54.3 55 50.9
Nitab4.5_0002418g0010 Nicotiana tabacum HOM05D000067 ORTHO05D000280 3.6e-06 54.3 52 53.8
Peaxi162Scf00299g00637 Petunia axillaris HOM05D000067 ORTHO05D000280 3.6e-06 54.3 51 56.9
THA.LOC104821085 Tarenaya hassleriana HOM05D000067 ORTHO05D000280 3.6e-06 54.3 54 53.7
GSVIVG01013515001 Vitis vinifera HOM05D000067 ORTHO05D000280 3.6e-06 54.3 47 57.4
Dinv18954 Davidia involucrata HOM05D000067 ORTHO05D000280 4.7e-06 53.9 44 59.1
Potri.019G023020 Populus trichocarpa HOM05D000067 ORTHO05D000280 4.7e-06 53.9 47 55.3
ECA238G0341 Erigeron canadensis HOM05D000067 ORTHO05D000280 6.1e-06 53.5 48 56.2
HanXRQChr07g0195911 Helianthus annuus HOM05D000067 ORTHO05D000280 6.1e-06 53.5 48 56.2
Potri.019G023000 Populus trichocarpa HOM05D000067 ORTHO05D000280 6.1e-06 53.5 47 57.4
CANSAT21G0586 Cannabis sativa HOM05D000067 ORTHO05D000280 7.9e-06 53.1 56 51.8
CAN.G523.1 Capsicum annuum HOM05D000067 ORTHO05D000280 7.9e-06 53.1 56 55.4
COL.COLO4_22401 Corchorus olitorius HOM05D000067 ORTHO05D000280 7.9e-06 53.1 47 51.1
Dinv15997 Davidia involucrata HOM05D000067 ORTHO05D000280 7.9e-06 53.1 47 57.4
ECA233G1866 Erigeron canadensis HOM05D000067 ORTHO05D000280 7.9e-06 53.1 48 52.1
Lsat_1_v5_gn_6_33321 Lactuca sativa HOM05D000067 ORTHO05D000280 7.9e-06 53.1 47 53.2
Lsat_1_v5_gn_8_143440 Lactuca sativa HOM05D000067 ORTHO05D000280 7.9e-06 53.1 51 51.0
Manes.12G148634 Manihot esculenta HOM05D000067 ORTHO05D000280 7.9e-06 53.1 46 54.3
Manes.12G148700 Manihot esculenta HOM05D000067 ORTHO05D000280 7.9e-06 53.1 46 54.3
Sopen01g048290 Solanum pennellii HOM05D000067 ORTHO05D000280 7.9e-06 53.1 56 48.2
THA.LOC104818121 Tarenaya hassleriana HOM05D000067 ORTHO05D000280 7.9e-06 53.1 56 50.0


User provided reference genes

Program Settings