Gene: Lsat_1_v5_gn_6_33321
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_6_33321
- Transcript Identifier Lsat_1_v5_gn_6_33321.1
- Gene Type Coding gene
- Location Lsat_1_v8_lg_6 : 42240843-42248591 : positive
Gene Family Information
- ID HOM05D000067
- #Genes/#Species 3957/93
- Phylogenetic origin
- ID ORTHO05D000280
- #Genes/#Species 1201/90
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id Lsat_1_v5_gn_6_33321.v5
- pacid 38937894
Descriptions
- Description PF00076//PF01397//PF03936 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Terpene synthase, N-terminal domain (Terpene_synth) // Terpene synthase family, metal binding domain (Terpene_synth_C)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016102 | IEA | InterPro | diterpenoid biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010333 | IEA | InterPro | terpene synthase activity | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0000287 | IEA | InterPro | magnesium ion binding | |
| GO:0016829 | IEA | InterPro | lyase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR044814 | Terpene cyclases, class 1, plant |
| IPR008949 | Isoprenoid synthase domain superfamily |
| IPR000504 | RNA recognition motif domain |
| IPR005630 | Terpene synthase, metal-binding domain |
| IPR036965 | Terpene synthase, N-terminal domain superfamily |
| IPR035979 | RNA-binding domain superfamily |
| IPR001906 | Terpene synthase, N-terminal domain |
| IPR008930 | Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid |
| Mapman id | Description |
|---|---|
| 9.1.4.2 | Secondary metabolism.terpenoids.terpene biosynthesis.mono-/sesquiterpene-/diterpene synthase |