Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p49280 Brassica napus HOM05D011688 ORTHO05D016088 1.4e-72 276.2 141 100.0
C04p42180 Brassica napus HOM05D011688 ORTHO05D016088 6.4e-65 250.8 140 93.6
C09p10010 Brassica napus HOM05D011688 ORTHO05D016088 6.9e-51 204.1 111 94.6
C04p60030 Brassica napus HOM05D011688 ORTHO05D016088 2.0e-50 202.6 111 91.9
BolC8t50660H Brassica oleracea HOM05D011688 ORTHO05D016088 4.2e-48 194.9 141 79.4
C04p24320 Brassica napus HOM05D011688 ORTHO05D016088 7.9e-39 164.1 90 94.4
BolC4t27506H Brassica oleracea HOM05D011688 ORTHO05D016088 5.3e-35 151.4 111 76.6
BolC1t03266H Brassica oleracea HOM05D011688 ORTHO05D016088 1.5e-34 149.8 111 76.6
BolC4t22733H Brassica oleracea HOM05D011688 ORTHO05D021812 1.7e-33 146.4 141 65.2
BolC4t22708H Brassica oleracea HOM05D011688 ORTHO05D021812 2.9e-33 145.6 141 64.5
C09p16910 Brassica napus HOM05D000274 ORTHO05D021812 2.3e-30 136.0 191 51.8
BolC9t54588H Brassica oleracea HOM05D000274 ORTHO05D006767 4.8e-28 128.3 209 48.3
C03p17260 Brassica napus HOM05D011688 ORTHO05D021812 5.0e-25 118.2 79 81.0
BcaB06g28460 Brassica carinata HOM05D011688 ORTHO05D021812 9.4e-24 114.0 79 78.5
BcaC04g22665 Brassica carinata HOM05D000274 ORTHO05D006767 1.5e-21 106.7 62 90.3
BcaC04g23296 Brassica carinata HOM05D011688 ORTHO05D016088 2.0e-21 106.3 114 56.1
BolC4t23601H Brassica oleracea HOM05D011688 ORTHO05D016088 2.2e-17 92.8 53 88.7
Aa31LG1G2210 Aethionema arabicum HOM05D000274 ORTHO05D006767 2.1e-15 86.3 113 50.4
BraA07t27925Z Brassica rapa HOM05D000274 ORTHO05D006767 2.1e-15 86.3 71 69.0
BcaC05g25194 Brassica carinata HOM05D000274 ORTHO05D006767 4.7e-15 85.1 113 50.4
Thhalv10008424m.g Eutrema salsugineum HOM05D000274 ORTHO05D006767 4.7e-15 85.1 113 50.4
Sp1g11010 Schrenkiella parvula HOM05D000274 ORTHO05D006767 7.9e-15 84.3 113 51.3
AL1G23740 Arabidopsis lyrata HOM05D000274 ORTHO05D006767 1.0e-14 84.0 113 49.6
AT1G12410 Arabidopsis thaliana HOM05D000274 ORTHO05D006767 1.0e-14 84.0 113 49.6
C05p10790 Brassica napus HOM05D000274 ORTHO05D006767 1.4e-14 83.6 113 49.6
BolC5t29821H Brassica oleracea HOM05D000274 ORTHO05D006767 1.4e-14 83.6 113 49.6
Carub.0001s1206 Capsella rubella HOM05D000274 ORTHO05D006767 3.0e-14 82.4 113 49.6
BcaC07g41702 Brassica carinata HOM05D000274 ORTHO05D006767 2.0e-13 79.7 113 48.7
A06p09220 Brassica napus HOM05D000274 ORTHO05D006767 2.0e-13 79.7 113 48.7
C08p47410 Brassica napus HOM05D000274 ORTHO05D006767 2.0e-13 79.7 113 48.7
BolC8t52281H Brassica oleracea HOM05D000274 ORTHO05D006767 2.0e-13 79.7 113 48.7
BraA06t24108Z Brassica rapa HOM05D000274 ORTHO05D006767 2.0e-13 79.7 113 48.7
BraA09t41734Z Brassica rapa HOM05D000274 ORTHO05D006767 2.0e-13 79.7 113 48.7
CARHR012700 Cardamine hirsuta HOM05D000274 ORTHO05D006767 2.0e-13 79.7 113 46.9
THA.LOC104818350 Tarenaya hassleriana HOM05D000274 ORTHO05D006767 1.4e-11 73.6 113 44.2
PGR004G1395 Punica granatum HOM05D000274 ORTHO05D006767 3.1e-11 72.4 111 44.1
A07p01340 Brassica napus HOM05D000274 ORTHO05D021812 4.1e-11 72.0 73 58.9
Oeu025551.1 Olea europaea HOM05D000274 ORTHO05D006767 4.1e-11 72.0 113 44.2
BolC4t22697H Brassica oleracea HOM05D011688 ORTHO05D016088 7.0e-11 71.2 45 86.7
PSO063G2753 Papaver somniferum HOM05D000274 ORTHO05D006767 7.0e-11 71.2 111 44.1
PSO782G2278 Papaver somniferum HOM05D000274 ORTHO05D006767 7.0e-11 71.2 111 44.1
Peaxi162Scf00271g00031 Petunia axillaris HOM05D000274 ORTHO05D006767 7.0e-11 71.2 113 44.2
Nitab4.5_0000439g0150 Nicotiana tabacum HOM05D000274 ORTHO05D006767 9.1e-11 70.9 111 44.1
Nitab4.5_0005241g0020 Nicotiana tabacum HOM05D000274 ORTHO05D006767 9.1e-11 70.9 111 44.1
TWI81G0936 Tripterygium wilfordii HOM05D000274 ORTHO05D006767 9.1e-11 70.9 115 42.6
EL10Ac5g12635 Beta vulgaris HOM05D000274 ORTHO05D006767 1.6e-10 70.1 110 43.6
Lsat_1_v5_gn_3_3401 Lactuca sativa HOM05D000274 ORTHO05D006767 1.6e-10 70.1 111 43.2
Thecc.03G263300 Theobroma cacao HOM05D000274 ORTHO05D006767 1.6e-10 70.1 111 44.1
CSS0003342 Camellia sinensis var. sinensis HOM05D000274 ORTHO05D006767 2.0e-10 69.7 111 43.2
CiPaw.12G103600 Carya illinoinensis HOM05D000274 ORTHO05D006767 2.0e-10 69.7 92 50.0
Cc08_g13400 Coffea canephora HOM05D000274 ORTHO05D006767 2.0e-10 69.7 111 44.1
Gohir.A12G222000 Gossypium hirsutum HOM05D000274 ORTHO05D006767 2.0e-10 69.7 111 43.2
Gohir.D12G224500 Gossypium hirsutum HOM05D000274 ORTHO05D006767 2.0e-10 69.7 111 43.2
Gorai.008G240600 Gossypium raimondii HOM05D000274 ORTHO05D006767 2.0e-10 69.7 111 43.2
Lj4g0011320 Lotus japonicus HOM05D000274 ORTHO05D006767 2.0e-10 69.7 94 47.9
MSTRG.1931 Avicennia marina HOM05D000274 ORTHO05D006767 2.6e-10 69.3 113 42.5
CANSAT21G0895 Cannabis sativa HOM05D000274 ORTHO05D006767 2.6e-10 69.3 92 48.9
Migut.A00848 Erythranthe guttata HOM05D000274 ORTHO05D006767 2.6e-10 69.3 94 47.9
Cpa.g.sc29.73 Carica papaya HOM05D000274 ORTHO05D006767 3.5e-10 68.9 111 43.2
MD04G1077600 Malus domestica HOM05D000274 ORTHO05D006767 3.5e-10 68.9 92 48.9
MD06G1063900 Malus domestica HOM05D000274 ORTHO05D006767 3.5e-10 68.9 92 48.9
SalBow6G2249 Salvia bowleyana HOM05D000274 ORTHO05D006767 3.5e-10 68.9 111 42.3
Ah.12g058120 Amaranthus hybridus HOM05D000274 ORTHO05D006767 4.5e-10 68.6 94 46.8
CSS0013233 Camellia sinensis var. sinensis HOM05D000274 ORTHO05D006767 4.5e-10 68.6 111 44.1
AUR62010522 Chenopodium quinoa HOM05D000274 ORTHO05D006767 4.5e-10 68.6 113 41.6
AUR62017375 Chenopodium quinoa HOM05D000274 ORTHO05D006767 4.5e-10 68.6 113 41.6
ECA246G0641 Erigeron canadensis HOM05D000274 ORTHO05D006767 4.5e-10 68.6 111 42.3
HanXRQChr06g0164721 Helianthus annuus HOM05D000274 ORTHO05D006767 4.5e-10 68.6 111 42.3
Lalb_Chr05g0225301 Lupinus albus HOM05D000274 ORTHO05D006767 4.5e-10 68.6 92 48.9
HanXRQChr17g0550501 Helianthus annuus HOM05D000274 ORTHO05D006767 5.9e-10 68.2 111 41.4
MBI04_g35280_MAGBIO Magnolia biondii HOM05D000274 ORTHO05D006767 5.9e-10 68.2 124 40.3
RcHm_v2.0_Chr7g0201061 Rosa chinensis HOM05D000274 ORTHO05D006767 5.9e-10 68.2 92 47.8
unitig_52.g17499 Utricularia gibba HOM05D000274 ORTHO05D006767 5.9e-10 68.2 108 44.4
Cfa012030 Carpinus fangiana HOM05D000274 ORTHO05D006767 7.7e-10 67.8 92 48.9
QL12p015358 Quercus lobata HOM05D000274 ORTHO05D006767 7.7e-10 67.8 92 48.9
Prupe.5G081300 Prunus persica HOM05D000274 ORTHO05D006767 1.0e-09 67.4 92 47.8
Sc01g0009140 Simmondsia chinensis HOM05D000274 ORTHO05D006767 1.0e-09 67.4 111 43.2
CAN.G630.55 Capsicum annuum HOM05D000274 ORTHO05D006767 1.3e-09 67.0 92 46.7
C06p36460 Brassica napus HOM05D011688 ORTHO05D103822 1.7e-09 66.6 81 53.1
FvH4_5g00850 Fragaria vesca HOM05D000274 ORTHO05D006767 1.7e-09 66.6 92 46.7
FAN04G3158 Fragaria x ananassa HOM05D000274 ORTHO05D006767 1.7e-09 66.6 92 46.7
FAN08G2422 Fragaria x ananassa HOM05D000274 ORTHO05D006767 1.7e-09 66.6 92 46.7
FAN18G2275 Fragaria x ananassa HOM05D000274 ORTHO05D006767 1.7e-09 66.6 92 46.7
ClCG01G003570 Citrullus lanatus HOM05D000274 ORTHO05D006767 3.8e-09 65.5 92 46.7
Atru.chr9.1459 Acer truncatum HOM05D000274 ORTHO05D006767 6.5e-09 64.7 92 46.7
HanXRQChr10g0284571 Helianthus annuus HOM05D000555 ORTHO05D000646 6.5e-09 64.7 93 44.1
Phvul.003G215800 Phaseolus vulgaris HOM05D000274 ORTHO05D006767 6.5e-09 64.7 92 46.7
TAR375G0199 Trochodendron aralioides HOM05D000274 ORTHO05D006767 6.5e-09 64.7 111 41.4
VMungo0251G1701 Vigna mungo HOM05D000274 ORTHO05D006767 6.5e-09 64.7 92 46.7
MELO3C005589.2 Cucumis melo HOM05D000274 ORTHO05D006767 8.5e-09 64.3 92 46.7
Gohir.A08G174700 Gossypium hirsutum HOM05D000274 ORTHO05D006767 8.5e-09 64.3 111 41.4
CSS0046106 Camellia sinensis var. sinensis HOM05D000274 ORTHO05D006767 1.1e-08 63.9 111 42.3
ATR0810G160 Amborella trichopoda HOM05D000274 ORTHO05D006767 1.5e-08 63.5 94 43.6
arahy.Tifrunner.gnm1.ann1.6KUP6V Arachis hypogaea HOM05D000274 ORTHO05D006767 1.9e-08 63.2 89 46.1
arahy.Tifrunner.gnm1.ann1.U20N0A Arachis hypogaea HOM05D000274 ORTHO05D006767 1.9e-08 63.2 89 46.1
Ciclev10021577m.g Citrus clementina HOM05D000274 ORTHO05D006767 1.9e-08 63.2 92 45.7
Glyma.05G053600 Glycine max HOM05D000274 ORTHO05D006767 2.5e-08 62.8 92 45.7
Glyma.17G136100 Glycine max HOM05D000274 ORTHO05D006767 2.5e-08 62.8 92 45.7
Duzib084G0200 Durio zibethinus HOM05D000274 ORTHO05D006767 3.2e-08 62.4 105 41.9
A09p63870 Brassica napus HOM05D000274 ORTHO05D006767 4.2e-08 62.0 94 45.7
DCAR_008450 Daucus carota HOM05D000274 ORTHO05D006767 4.2e-08 62.0 107 42.1
TAR626G1468 Trochodendron aralioides HOM05D000274 ORTHO05D006767 4.2e-08 62.0 111 40.5
Sopen08g027970 Solanum pennellii HOM05D000274 ORTHO05D006767 7.2e-08 61.2 92 44.6
Potri.001G115900 Populus trichocarpa HOM05D000274 ORTHO05D006767 9.4e-08 60.8 113 39.8
Sabra01G0089000 Salix brachista HOM05D000274 ORTHO05D006767 9.4e-08 60.8 113 39.8
PGSC0003DMG400003952 Solanum tuberosum HOM05D000274 ORTHO05D006767 9.4e-08 60.8 92 44.6
Ca_12287_v3 Cicer arietinum L. HOM05D000274 ORTHO05D006767 1.2e-07 60.5 92 43.5
Mapoly0213s0011 Marchantia polymorpha HOM05D000274 ORTHO05D006767 1.2e-07 60.5 94 42.6
CBR_g23029 Chara braunii HOM05D000274 ORTHO05D006767 1.6e-07 60.1 90 43.3
Solyc08g079620.3 Solanum lycopersicum HOM05D000274 ORTHO05D006767 1.6e-07 60.1 92 43.5
CsaV3_5G003660 Cucumis sativus L. HOM05D000274 ORTHO05D006767 2.1e-07 59.7 93 43.0
arahy.Tifrunner.gnm1.ann1.6QW8CL Arachis hypogaea HOM05D000274 ORTHO05D006767 3.6e-07 58.9 89 43.8
COL.COLO4_23852 Corchorus olitorius HOM05D000274 ORTHO05D006767 3.6e-07 58.9 111 40.5
Manes.01G071900 Manihot esculenta HOM05D000274 ORTHO05D006767 4.7e-07 58.5 113 38.9
Pp3c12_2930 Physcomitrium patens HOM05D000274 ORTHO05D006767 6.1e-07 58.2 92 40.2
CBR_g8944 Chara braunii HOM05D000274 ORTHO05D006767 8.0e-07 57.8 90 41.1
Medtr4g102000 Medicago truncatula HOM05D000274 ORTHO05D006767 8.0e-07 57.8 124 36.3
Pp3c3_12310 Physcomitrium patens HOM05D000274 ORTHO05D006767 8.0e-07 57.8 92 40.2
AagrBONN_evm.TU.Sc2ySwM_117.489 Anthoceros agrestis HOM05D000274 ORTHO05D006767 1.0e-06 57.4 88 43.2
Lj2A206T34 Lonicera japonica HOM05D000274 ORTHO05D006767 1.8e-06 56.6 90 38.9


User provided reference genes

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