Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p48340 Brassica napus HOM05D009342 ORTHO05D012604 1.3e-40 169.1 77 100.0
BraA02t08092Z Brassica rapa HOM05D009342 ORTHO05D012604 3.9e-40 167.5 77 98.7
A02p30770 Brassica napus HOM05D009342 ORTHO05D012604 1.1e-39 166.0 77 97.4
A02p30830 Brassica napus HOM05D009342 ORTHO05D012604 7.4e-39 163.3 77 96.1
BraA02t08097Z Brassica rapa HOM05D009342 ORTHO05D012604 7.4e-39 163.3 77 96.1
BcaC03g16932 Brassica carinata HOM05D009342 ORTHO05D012604 1.1e-31 139.4 62 98.4
C02p48330 Brassica napus HOM05D009342 ORTHO05D012604 1.4e-26 122.5 77 72.7
BolC2t10865H Brassica oleracea HOM05D009342 ORTHO05D012604 1.4e-26 122.5 77 72.7
A02p30760 Brassica napus HOM05D009342 ORTHO05D012604 1.0e-24 116.3 77 70.1
BraA02t08091Z Brassica rapa HOM05D009342 ORTHO05D012604 1.0e-24 116.3 77 70.1
BcaC03g16931 Brassica carinata HOM05D009342 ORTHO05D012604 3.8e-19 97.8 62 69.4
AT5G47077 Arabidopsis thaliana HOM05D009342 ORTHO05D012604 5.5e-18 94.0 74 60.8
AL8G11140 Arabidopsis lyrata HOM05D009342 ORTHO05D012604 6.7e-16 87.0 71 57.7
AT5G47075 Arabidopsis thaliana HOM05D009342 ORTHO05D012604 1.1e-15 86.3 74 55.4
AT5G47175 Arabidopsis thaliana HOM05D009342 ORTHO05D012604 3.7e-14 81.3 79 51.9
BcaB07g30795 Brassica carinata HOM05D009342 ORTHO05D012604 5.3e-13 77.4 78 52.6
Carub.0008s0057 Capsella rubella HOM05D009342 ORTHO05D012604 1.2e-12 76.3 78 47.4
Carub.0008s0074 Capsella rubella HOM05D009342 ORTHO05D012604 3.4e-12 74.7 77 49.4
Carub.0004s1016 Capsella rubella HOM05D009342 ORTHO05D009997 4.2e-10 67.8 79 46.8
A09p22830 Brassica napus HOM05D009342 ORTHO05D012604 7.2e-10 67.0 65 47.7
BraA09t37885Z Brassica rapa HOM05D009342 ORTHO05D012604 7.2e-10 67.0 65 47.7
C08p36050 Brassica napus HOM05D009342 ORTHO05D009997 9.4e-10 66.6 77 41.6
C09p29340 Brassica napus HOM05D009342 ORTHO05D012604 9.4e-10 66.6 65 46.2
BolC8t51185H Brassica oleracea HOM05D009342 ORTHO05D009997 9.4e-10 66.6 77 41.6
BcaC07g40621 Brassica carinata HOM05D009342 ORTHO05D009997 1.2e-09 66.2 77 41.6
Aa31LG10G15250 Aethionema arabicum HOM05D009342 ORTHO05D009997 3.6e-09 64.7 74 37.8
A09p53240 Brassica napus HOM05D009342 ORTHO05D009997 3.6e-09 64.7 77 41.6
Sp5g02203 Schrenkiella parvula HOM05D009342 ORTHO05D009997 4.6e-09 64.3 77 39.0
CARHR101820 Cardamine hirsuta HOM05D007747 ORTHO05D009997 8.8e-08 60.1 78 39.7
AT3G61172 Arabidopsis thaliana HOM05D009342 ORTHO05D009997 3.3e-07 58.2 74 33.8
CARHR286760 Cardamine hirsuta HOM05D009342 ORTHO05D009997 7.4e-07 57.0 74 35.1
CARHR096880 Cardamine hirsuta HOM05D007747 ORTHO05D009997 1.3e-06 56.2 78 38.5
Carub.0005s2783 Capsella rubella HOM05D009342 ORTHO05D009997 1.7e-06 55.8 77 36.4
AT2G28355 Arabidopsis thaliana HOM05D021605 ORTHO05D010567 2.8e-06 55.1 68 38.2
Carub.0230s0002 Capsella rubella HOM05D007747 ORTHO05D009997 4.8e-06 54.3 79 40.5
CARHR121310 Cardamine hirsuta HOM05D007747 ORTHO05D009997 4.8e-06 54.3 76 38.2
THA.LOC104815826 Tarenaya hassleriana HOM05D013401 ORTHO05D009997 8.2e-06 53.5 71 33.8


User provided reference genes

Program Settings