Gene: AT2G28355
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G28355
- Transcript Identifier AT2G28355.1
- Gene Type Coding gene
- Location Chr2 : 12119388-12120089 : positive
Gene Family Information
- ID HOM05D021605
- #Genes/#Species 6/3
- Phylogenetic origin
- ID ORTHO05D010567
- #Genes/#Species 57/13
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT2G28355.1
- symbol LCR5
- uniprot Q8S8H3
Descriptions
- Description low-molecular-weight cysteine-rich 5
- Computational description low-molecular-weight cysteine-rich 5 (LCR5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: S locus-related glycoprotein 1 binding pollen coat (InterPro:IPR010851), Knottin (InterPro:IPR003614); BEST Arabidopsis thaliana protein match is: low-molecular-weight cysteine-rich 14 (TAIR:AT2G25344.1); Has 75 Blast hits to 75 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006952 | IEA | GOA Database | defense response | |
| GO:0050832 | IEA | GOA Database | defense response to fungus | |
| GO:0031640 | IEA | GOA Database | killing of cells of other organism |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003674 | ND | Gene Ontology | molecular_function |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005576 | IEA | GOA Database | extracellular region | |
| GO:0005576 | ISM | Gene Ontology | extracellular region |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR010851 | Defensin-like protein |
| Mapman id | Description |
|---|---|
| 26.9.3.2.3 | External stimuli response.pathogen.defense mechanisms.defensin activities.defensin (PDF3) |