Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p42580 Brassica napus HOM05D001095 ORTHO05D026378 7.1e-44 180.3 94 100.0
A02p26790 Brassica napus HOM05D001095 ORTHO05D026378 2.5e-25 118.6 86 81.4
BraA02t07683Z Brassica rapa HOM05D001095 ORTHO05D026378 2.5e-25 118.6 86 81.4
BcaC01g04695 Brassica carinata HOM05D001095 ORTHO05D000976 8.2e-16 87.0 65 69.2
A03p28820 Brassica napus HOM05D001095 ORTHO05D000976 8.2e-16 87.0 65 69.2
C03p34840 Brassica napus HOM05D001095 ORTHO05D000976 8.2e-16 87.0 65 69.2
BolC3t15796H Brassica oleracea HOM05D001095 ORTHO05D000976 8.2e-16 87.0 65 69.2
BraA03t12080Z Brassica rapa HOM05D001095 ORTHO05D000976 8.2e-16 87.0 65 69.2
AT4G10020 Arabidopsis thaliana HOM05D001095 ORTHO05D000976 1.4e-15 86.3 65 70.8
Carub.0006s2857 Capsella rubella HOM05D001095 ORTHO05D000976 1.4e-15 86.3 65 70.8
Sp6g07380 Schrenkiella parvula HOM05D001095 ORTHO05D000976 1.4e-15 86.3 65 69.2
BcaB01g02769 Brassica carinata HOM05D001095 ORTHO05D000976 1.8e-15 85.9 65 69.2
AL6G43740 Arabidopsis lyrata HOM05D001095 ORTHO05D000976 2.4e-15 85.5 65 70.8
Thhalv10029315m.g Eutrema salsugineum HOM05D001095 ORTHO05D000976 2.4e-15 85.5 65 69.2
CARHR261020 Cardamine hirsuta HOM05D001095 ORTHO05D000976 5.3e-15 84.3 65 67.7
Aa31LG9G11970 Aethionema arabicum HOM05D001095 ORTHO05D000976 1.9e-12 75.9 65 61.5
Cfa008105 Carpinus fangiana HOM05D001095 ORTHO05D000976 2.5e-12 75.5 65 56.9
Haze_13919 Corylus avellana HOM05D001095 ORTHO05D000976 2.5e-12 75.5 65 56.9
QL09p003769 Quercus lobata HOM05D001095 ORTHO05D000976 2.5e-12 75.5 65 58.5
TWI12G1084 Tripterygium wilfordii HOM05D001095 ORTHO05D000976 3.2e-12 75.1 65 56.9
CANSAT25G1839 Cannabis sativa HOM05D001095 ORTHO05D000976 4.2e-12 74.7 65 56.9
MD08G1214700 Malus domestica HOM05D001095 ORTHO05D000976 5.5e-12 74.3 71 53.5
Atru.chr13.2428 Acer truncatum HOM05D001095 ORTHO05D000976 1.2e-11 73.2 65 56.9
CiPaw.04G010600 Carya illinoinensis HOM05D001095 ORTHO05D000976 1.2e-11 73.2 65 58.5
ClCG08G000700 Citrullus lanatus HOM05D001095 ORTHO05D000976 1.6e-11 72.8 65 53.8
Migut.C01358 Erythranthe guttata HOM05D001095 ORTHO05D000976 1.6e-11 72.8 65 55.4
HPP92_012683 Vanilla planifolia HOM05D001095 ORTHO05D000976 2.1e-11 72.4 65 53.8
HPP92_012704 Vanilla planifolia HOM05D001095 ORTHO05D000976 2.1e-11 72.4 65 53.8
DCAR_003515 Daucus carota HOM05D001095 ORTHO05D000976 2.7e-11 72.0 65 55.4
TWI75G1039 Tripterygium wilfordii HOM05D001095 ORTHO05D000976 2.7e-11 72.0 65 55.4
CsaV3_5G040170 Cucumis sativus L. HOM05D001095 ORTHO05D000976 3.6e-11 71.6 65 53.8
unitig_8.g4890 Utricularia gibba HOM05D001095 ORTHO05D000976 3.6e-11 71.6 65 55.4
Prupe.1G546200 Prunus persica HOM05D001095 ORTHO05D000976 4.6e-11 71.2 65 53.8
THA.LOC104806756 Tarenaya hassleriana HOM05D001095 ORTHO05D000976 4.6e-11 71.2 65 55.4
PSO017G7381 Papaver somniferum HOM05D001095 ORTHO05D000976 6.1e-11 70.9 65 55.4
PSO170G2491 Papaver somniferum HOM05D001095 ORTHO05D000976 6.1e-11 70.9 65 55.4
SalBow6G6004 Salvia bowleyana HOM05D001095 ORTHO05D000976 7.9e-11 70.5 78 47.4
SalBow6G6815 Salvia bowleyana HOM05D001095 ORTHO05D000976 7.9e-11 70.5 78 47.4
SHI16736 Sapria himalayana HOM05D001095 ORTHO05D000976 7.9e-11 70.5 65 50.8
Ciclev10020750m.g Citrus clementina HOM05D001095 ORTHO05D000976 1.0e-10 70.1 65 53.8
MELO3C022194.2 Cucumis melo HOM05D001095 ORTHO05D000976 1.0e-10 70.1 65 52.3
CDE05G0572 Ceratophyllum demersum HOM05D001095 ORTHO05D000976 1.4e-10 69.7 65 55.4
Gohir.A05G238200 Gossypium hirsutum HOM05D001095 ORTHO05D000976 1.4e-10 69.7 78 47.4
Gohir.D05G240200 Gossypium hirsutum HOM05D001095 ORTHO05D000976 1.4e-10 69.7 78 47.4
Gorai.009G249100 Gossypium raimondii HOM05D001095 ORTHO05D000976 1.4e-10 69.7 78 47.4
SalBow7G4282 Salvia bowleyana HOM05D001095 ORTHO05D000976 1.4e-10 69.7 65 55.4
EL10Ac1g01639 Beta vulgaris HOM05D001095 ORTHO05D000976 1.8e-10 69.3 71 52.1
MD15G1397600 Malus domestica HOM05D001095 ORTHO05D000976 1.8e-10 69.3 71 50.7
PGR042G3573 Punica granatum HOM05D001095 ORTHO05D000976 1.8e-10 69.3 65 55.4
COL.COLO4_24591 Corchorus olitorius HOM05D001095 ORTHO05D000976 2.3e-10 68.9 71 50.7
Os03g0842900 Oryza sativa ssp. japonica HOM05D001095 ORTHO05D000976 2.3e-10 68.9 65 52.3
Potri.019G073200 Populus trichocarpa HOM05D001095 ORTHO05D000976 2.3e-10 68.9 65 52.3
AUR62043538 Chenopodium quinoa HOM05D001095 ORTHO05D000976 3.0e-10 68.6 65 55.4
Peaxi162Scf00078g00032 Petunia axillaris HOM05D001095 ORTHO05D000976 3.0e-10 68.6 65 52.3
RcHm_v2.0_Chr7g0231461 Rosa chinensis HOM05D001095 ORTHO05D000976 3.0e-10 68.6 65 53.8
SGA_v2.0_scaffold24G10631 Striga asiatica HOM05D001095 ORTHO05D000976 3.0e-10 68.6 65 50.8
AUR62022399 Chenopodium quinoa HOM05D001095 ORTHO05D000976 3.9e-10 68.2 65 53.8
FvH4_5g33170 Fragaria vesca HOM05D001095 ORTHO05D000976 3.9e-10 68.2 65 53.8
FAN04G0017 Fragaria x ananassa HOM05D001095 ORTHO05D000976 3.9e-10 68.2 65 53.8
FAN08G3146 Fragaria x ananassa HOM05D001095 ORTHO05D000976 3.9e-10 68.2 65 53.8
FAN18G1775 Fragaria x ananassa HOM05D001095 ORTHO05D000976 3.9e-10 68.2 65 53.8
HanXRQChr02g0037041 Helianthus annuus HOM05D001095 ORTHO05D000976 3.9e-10 68.2 65 52.3
Manes.18G119600 Manihot esculenta HOM05D001095 ORTHO05D000976 3.9e-10 68.2 65 50.8
Rhsim12G0004700 Rhododendron simsii HOM05D001095 ORTHO05D000976 3.9e-10 68.2 65 52.3
Thecc.08G174000 Theobroma cacao HOM05D001095 ORTHO05D000976 5.1e-10 67.8 71 50.7
Cpa.g.sc21.62 Carica papaya HOM05D001095 ORTHO05D000976 8.8e-10 67.0 65 52.3
Cc10_g09130 Coffea canephora HOM05D001095 ORTHO05D000976 1.1e-09 66.6 65 50.8
Eucgr.F02966 Eucalyptus grandis HOM05D001095 ORTHO05D000976 1.1e-09 66.6 65 53.8
vmacro22749 Vaccinium macrocarpon HOM05D001095 ORTHO05D000976 1.1e-09 66.6 65 52.3
CSS0007600 Camellia sinensis var. sinensis HOM05D001095 ORTHO05D000976 1.5e-09 66.2 65 49.2
CSS0048343 Camellia sinensis var. sinensis HOM05D001095 ORTHO05D000976 1.5e-09 66.2 65 49.2
Dinv09404 Davidia involucrata HOM05D001095 ORTHO05D000976 1.5e-09 66.2 65 47.7
GSVIVG01036430001 Vitis vinifera HOM05D001095 ORTHO05D000976 1.5e-09 66.2 63 52.4
Actinidia03508 Actinidia chinensis HOM05D001095 ORTHO05D026378 2.0e-09 65.9 65 49.2
MBI06_g35696_MAGBIO Magnolia biondii HOM05D001095 ORTHO05D000976 2.0e-09 65.9 65 53.8
Nitab4.5_0003346g0070 Nicotiana tabacum HOM05D001095 ORTHO05D000976 2.0e-09 65.9 65 50.8
Actinidia29394 Actinidia chinensis HOM05D001095 ORTHO05D000976 2.5e-09 65.5 65 50.8
Oeu028102.1 Olea europaea HOM05D001095 ORTHO05D000976 2.5e-09 65.5 65 49.2
SGA_v2.0_scaffold118G32588 Striga asiatica HOM05D001095 ORTHO05D000976 2.5e-09 65.5 65 50.8
Glyma.11G015100 Glycine max HOM05D001095 ORTHO05D000976 3.3e-09 65.1 65 50.8
HanXRQChr04g0102651 Helianthus annuus HOM05D001095 ORTHO05D000976 3.3e-09 65.1 63 52.4
Nitab4.5_0004761g0040 Nicotiana tabacum HOM05D001095 ORTHO05D000976 3.3e-09 65.1 65 50.8
Potri.013G100200 Populus trichocarpa HOM05D001095 ORTHO05D000976 3.3e-09 65.1 65 52.3
Lalb_Chr16g0376811 Lupinus albus HOM05D001095 ORTHO05D000976 7.4e-09 63.9 65 49.2
Nitab4.5_0003510g0030 Nicotiana tabacum HOM05D001095 ORTHO05D000976 7.4e-09 63.9 65 50.8
Glyma.01G227900 Glycine max HOM05D001095 ORTHO05D000976 9.7e-09 63.5 65 49.2
LjContig00222g0013405 Lotus japonicus HOM05D001095 ORTHO05D000976 1.3e-08 63.2 65 49.2
Sc02g0008160 Simmondsia chinensis HOM05D001095 ORTHO05D000976 1.3e-08 63.2 65 49.2
Solyc06g064650.4 Solanum lycopersicum HOM05D001095 ORTHO05D000976 1.3e-08 63.2 65 47.7
Sopen06g023130 Solanum pennellii HOM05D001095 ORTHO05D000976 1.3e-08 63.2 65 47.7
ATR1089G151 Amborella trichopoda HOM05D001095 ORTHO05D000976 1.7e-08 62.8 65 46.2
CAN.G1199.6 Capsicum annuum HOM05D001095 ORTHO05D000976 1.7e-08 62.8 65 47.7
DCAR_007505 Daucus carota HOM05D001095 ORTHO05D000976 1.7e-08 62.8 61 52.5
DCAR_007506 Daucus carota HOM05D001095 ORTHO05D000976 1.7e-08 62.8 61 52.5
Lsat_1_v5_gn_1_25201 Lactuca sativa HOM05D001095 ORTHO05D000976 1.7e-08 62.8 65 47.7
Nitab4.5_0002654g0160 Nicotiana tabacum HOM05D001095 ORTHO05D000976 2.8e-08 62.0 65 49.2
Peaxi162Scf00961g00312 Petunia axillaris HOM05D001095 ORTHO05D000976 3.7e-08 61.6 65 47.7
TAR628G1441 Trochodendron aralioides HOM05D001095 ORTHO05D000976 4.8e-08 61.2 65 46.2
CARHR155970 Cardamine hirsuta HOM05D001095 ORTHO05D000976 8.2e-08 60.5 64 46.9
ECA247G2510 Erigeron canadensis HOM05D001095 ORTHO05D000976 8.2e-08 60.5 65 47.7
VMungo0251G1555 Vigna mungo HOM05D001095 ORTHO05D000976 8.2e-08 60.5 59 52.5
CARHR155980 Cardamine hirsuta HOM05D001095 ORTHO05D000976 1.1e-07 60.1 64 46.9
QL10p002217 Quercus lobata HOM05D001095 ORTHO05D000976 1.1e-07 60.1 59 54.2
Sed0026160 Sechium edule HOM05D001095 ORTHO05D000976 1.1e-07 60.1 65 47.7
Lj9A700T93 Lonicera japonica HOM05D001095 ORTHO05D000976 1.4e-07 59.7 65 47.7
Oeu006615.1 Olea europaea HOM05D001095 ORTHO05D000976 1.4e-07 59.7 65 46.2
QL10p002281 Quercus lobata HOM05D001095 ORTHO05D000976 1.8e-07 59.3 60 50.0
Potri.012G101900 Populus trichocarpa HOM05D001095 ORTHO05D000976 2.4e-07 58.9 61 49.2
Aa31LG4G16140 Aethionema arabicum HOM05D001095 ORTHO05D000976 3.1e-07 58.5 59 47.5
Aa31LG4G16160 Aethionema arabicum HOM05D001095 ORTHO05D000976 3.1e-07 58.5 59 47.5
Phvul.002G285000 Phaseolus vulgaris HOM05D001095 ORTHO05D000976 4.1e-07 58.2 59 50.8
HPP92_021695 Vanilla planifolia HOM05D001095 ORTHO05D000976 4.1e-07 58.2 79 41.8
HPP92_021708 Vanilla planifolia HOM05D001095 ORTHO05D000976 4.1e-07 58.2 79 41.8
AT3G47350 Arabidopsis thaliana HOM05D001095 ORTHO05D000976 5.3e-07 57.8 61 47.5
unitig_744.g24642 Utricularia gibba HOM05D001095 ORTHO05D000976 5.3e-07 57.8 64 48.4
Lsat_1_v5_gn_4_82500 Lactuca sativa HOM05D001095 ORTHO05D000976 9.1e-07 57.0 59 50.8
Nn3g18632 Nelumbo nucifera HOM05D001095 ORTHO05D000976 9.1e-07 57.0 71 42.3
Nn4g24890 Nelumbo nucifera HOM05D001095 ORTHO05D000976 9.1e-07 57.0 62 45.2
TAR629G1934 Trochodendron aralioides HOM05D001095 ORTHO05D000976 9.1e-07 57.0 59 49.2
HPP92_021693 Vanilla planifolia HOM05D001095 ORTHO05D000976 9.1e-07 57.0 79 40.5
HPP92_021710 Vanilla planifolia HOM05D001095 ORTHO05D000976 9.1e-07 57.0 66 47.0
Carub.0005s1342 Capsella rubella HOM05D001095 ORTHO05D000976 1.2e-06 56.6 61 47.5
ECA232G1822 Erigeron canadensis HOM05D001095 ORTHO05D000976 1.2e-06 56.6 66 43.9
Nitab4.5_0000709g0020 Nicotiana tabacum HOM05D001095 ORTHO05D000976 1.2e-06 56.6 64 45.3
QL10p002321 Quercus lobata HOM05D001095 ORTHO05D000976 1.2e-06 56.6 60 48.3
THA.LOC104811575 Tarenaya hassleriana HOM05D001095 ORTHO05D000976 1.2e-06 56.6 61 44.3
PSO017G5184 Papaver somniferum HOM05D001095 ORTHO05D000976 1.5e-06 56.2 62 50.0
QL08p004897 Quercus lobata HOM05D001095 ORTHO05D000976 1.5e-06 56.2 59 45.8
Medtr5g008850 Medicago truncatula HOM05D001095 ORTHO05D000976 2.0e-06 55.8 70 44.3
Peaxi162Scf00128g01525 Petunia axillaris HOM05D001095 ORTHO05D000976 2.0e-06 55.8 64 45.3
QL05p065691 Quercus lobata HOM05D001095 ORTHO05D000976 2.0e-06 55.8 59 45.8
QL05p066045 Quercus lobata HOM05D001095 ORTHO05D000976 2.0e-06 55.8 60 45.0
Sc10g0010580 Simmondsia chinensis HOM05D001095 ORTHO05D000976 2.0e-06 55.8 64 46.9
ATR0582G184 Amborella trichopoda HOM05D001095 ORTHO05D000976 2.6e-06 55.5 62 45.2
AT3G47360 Arabidopsis thaliana HOM05D001095 ORTHO05D000976 2.6e-06 55.5 61 45.9
BcaC06g33441 Brassica carinata HOM05D001095 ORTHO05D000976 2.6e-06 55.5 59 45.8
C07p47460 Brassica napus HOM05D001095 ORTHO05D000976 2.6e-06 55.5 59 45.8
CDE06G1632 Ceratophyllum demersum HOM05D001095 ORTHO05D000976 2.6e-06 55.5 62 46.8
Thhalv10011076m.g Eutrema salsugineum HOM05D001095 ORTHO05D000976 2.6e-06 55.5 59 47.5
FAN18G0295 Fragaria x ananassa HOM05D001095 ORTHO05D000976 2.6e-06 55.5 59 52.5
Lj9C481T7 Lonicera japonica HOM05D001095 ORTHO05D000976 2.6e-06 55.5 67 46.3
Lj9C481T9 Lonicera japonica HOM05D001095 ORTHO05D000976 2.6e-06 55.5 67 46.3
PSO478G0774 Papaver somniferum HOM05D001095 ORTHO05D000976 2.6e-06 55.5 62 46.8
THA.LOC104825026 Tarenaya hassleriana HOM05D001095 ORTHO05D000976 2.6e-06 55.5 59 45.8
vmacro19132 Vaccinium macrocarpon HOM05D001095 ORTHO05D000976 2.6e-06 55.5 59 50.8
Actinidia30626 Actinidia chinensis HOM05D001095 ORTHO05D000976 3.4e-06 55.1 64 43.8
BolC7t45273H Brassica oleracea HOM05D001095 ORTHO05D000976 3.4e-06 55.1 59 45.8
FvH4_5g08730 Fragaria vesca HOM05D001095 ORTHO05D000976 3.4e-06 55.1 59 52.5
Lj6C831T0 Lonicera japonica HOM05D001095 ORTHO05D000976 3.4e-06 55.1 69 43.5
Potri.015G100000 Populus trichocarpa HOM05D001095 ORTHO05D000976 3.4e-06 55.1 59 49.2
QL05p065630 Quercus lobata HOM05D001095 ORTHO05D000976 3.4e-06 55.1 59 45.8
Sabra06G0042600 Salix brachista HOM05D006381 ORTHO05D008523 3.4e-06 55.1 59 49.2
A03p49400 Brassica napus HOM05D001095 ORTHO05D000976 4.5e-06 54.7 59 45.8
BraA03t14041Z Brassica rapa HOM05D001095 ORTHO05D000976 4.5e-06 54.7 59 45.8
Duzib068G0050 Durio zibethinus HOM05D001095 ORTHO05D000976 4.5e-06 54.7 59 49.2
Eucgr.B00089 Eucalyptus grandis HOM05D001095 ORTHO05D000976 4.5e-06 54.7 72 44.4
FAN13G0111 Fragaria x ananassa HOM05D001095 ORTHO05D000976 4.5e-06 54.7 59 52.5
Lsat_1_v5_gn_5_11960 Lactuca sativa HOM05D001095 ORTHO05D000976 4.5e-06 54.7 59 47.5
Oeu025418.1 Olea europaea HOM05D001095 ORTHO05D000976 4.5e-06 54.7 76 43.4
Potri.012G102000 Populus trichocarpa HOM05D001095 ORTHO05D000976 4.5e-06 54.7 59 49.2
Sabra16G0052500 Salix brachista HOM05D001095 ORTHO05D000976 4.5e-06 54.7 59 49.2
THA.LOC104811576 Tarenaya hassleriana HOM05D001095 ORTHO05D000976 4.5e-06 54.7 59 44.1
Thecc.03G133300 Theobroma cacao HOM05D001095 ORTHO05D000976 4.5e-06 54.7 59 49.2
Dinv11698 Davidia involucrata HOM05D001095 ORTHO05D000976 5.9e-06 54.3 64 45.3
HanXRQChr09g0273441 Helianthus annuus HOM05D001095 ORTHO05D000976 5.9e-06 54.3 61 50.8
Nn7g36853 Nelumbo nucifera HOM05D001095 ORTHO05D000976 5.9e-06 54.3 62 46.8
Phvul.002G285100 Phaseolus vulgaris HOM05D001095 ORTHO05D000976 5.9e-06 54.3 67 44.8
Prupe.5G148000 Prunus persica HOM05D001095 ORTHO05D000976 5.9e-06 54.3 62 45.2
TWI23G1260 Tripterygium wilfordii HOM05D001095 ORTHO05D000976 5.9e-06 54.3 77 41.6
GSVIVG01000914001 Vitis vinifera HOM05D001095 ORTHO05D000976 5.9e-06 54.3 64 43.8
Aa31LG4G16150 Aethionema arabicum HOM05D001095 ORTHO05D019508 7.7e-06 53.9 59 47.5
Cc00_g13460 Coffea canephora HOM05D001095 ORTHO05D000976 7.7e-06 53.9 63 46.0
Thhalv10010570m.g Eutrema salsugineum HOM05D001095 ORTHO05D000976 7.7e-06 53.9 59 45.8
Potri.015G099900 Populus trichocarpa HOM05D001095 ORTHO05D000976 7.7e-06 53.9 59 47.5
Sabra15G0120600 Salix brachista HOM05D001095 ORTHO05D000976 7.7e-06 53.9 59 47.5


User provided reference genes

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