Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p33860 Brassica napus HOM05D002484 ORTHO05D002541 1.9e-43 178.7 86 100.0
BolC2t09321H Brassica oleracea HOM05D002484 ORTHO05D002541 4.7e-42 174.1 86 97.7
BcaC03g15604 Brassica carinata HOM05D002484 ORTHO05D002541 1.5e-40 169.1 92 92.4
BcaB05g24949 Brassica carinata HOM05D002484 ORTHO05D002541 1.6e-29 132.5 84 78.6
A07p41390 Brassica napus HOM05D002484 ORTHO05D002541 1.7e-20 102.4 81 65.4
BraA07t31672Z Brassica rapa HOM05D002484 ORTHO05D002541 1.7e-20 102.4 81 65.4
Sp5g30950 Schrenkiella parvula HOM05D002484 ORTHO05D002541 2.2e-20 102.1 81 64.2
AT5G44420 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 2.9e-20 101.7 82 65.9
Sp5g30970 Schrenkiella parvula HOM05D002484 ORTHO05D002541 3.8e-20 101.3 81 65.4
BcaC03g15629 Brassica carinata HOM05D002484 ORTHO05D002541 6.5e-20 100.5 82 65.9
C02p33630 Brassica napus HOM05D002484 ORTHO05D002541 6.5e-20 100.5 82 65.9
BolC2t09341H Brassica oleracea HOM05D002484 ORTHO05D002541 6.5e-20 100.5 82 65.9
Carub.0002s2271 Capsella rubella HOM05D002484 ORTHO05D002541 8.5e-20 100.1 82 65.9
CARHR069310 Cardamine hirsuta HOM05D002484 ORTHO05D002541 8.5e-20 100.1 82 64.6
CARHR284300 Cardamine hirsuta HOM05D002484 ORTHO05D002541 1.1e-19 99.8 82 64.6
BcaB02g07044 Brassica carinata HOM05D002484 ORTHO05D002541 1.5e-19 99.4 81 63.0
Carub.0002s2268 Capsella rubella HOM05D002484 ORTHO05D002541 1.5e-19 99.4 82 64.6
BcaB05g24952 Brassica carinata HOM05D002484 ORTHO05D002541 1.9e-19 99.0 82 64.6
CARHR069280 Cardamine hirsuta HOM05D002484 ORTHO05D002541 1.9e-19 99.0 82 64.6
Thhalv10019399m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 1.9e-19 99.0 81 63.0
AT2G26010 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 2.5e-19 98.6 82 64.6
Carub.0002s2269 Capsella rubella HOM05D002484 ORTHO05D002541 2.5e-19 98.6 82 64.6
A07p41370 Brassica napus HOM05D002484 ORTHO05D002541 3.2e-19 98.2 82 63.4
BraA07t31670Z Brassica rapa HOM05D002484 ORTHO05D002541 3.2e-19 98.2 82 63.4
Thhalv10019396m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 4.2e-19 97.8 82 63.4
C06p49790 Brassica napus HOM05D002484 ORTHO05D002541 5.5e-19 97.4 82 63.4
Carub.0007s3201 Capsella rubella HOM05D002484 ORTHO05D002541 5.5e-19 97.4 81 61.7
AT2G26020 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 7.2e-19 97.1 82 62.2
Carub.0002s2270 Capsella rubella HOM05D002484 ORTHO05D002541 9.4e-19 96.7 82 63.4
AT5G44430 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 1.2e-18 96.3 82 63.4
A02p20270 Brassica napus HOM05D002484 ORTHO05D002541 1.2e-18 96.3 82 63.4
BraA02t07061Z Brassica rapa HOM05D002484 ORTHO05D002541 1.2e-18 96.3 82 63.4
Thhalv10000662m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 1.2e-18 96.3 81 60.5
Thhalv10019395m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 1.2e-18 96.3 82 62.2
BcaB02g07045 Brassica carinata HOM05D002484 ORTHO05D002541 1.6e-18 95.9 82 63.4
Thhalv10019397m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 3.6e-18 94.7 81 59.3
Thhalv10019398m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 3.6e-18 94.7 81 59.3
BcaC08g47321 Brassica carinata HOM05D002484 ORTHO05D002541 4.7e-18 94.4 82 59.8
AT1G75830 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 6.1e-18 94.0 82 61.0
A07p28700 Brassica napus HOM05D002484 ORTHO05D002541 8.0e-18 93.6 82 61.0
BraA07t30510Z Brassica rapa HOM05D002484 ORTHO05D002541 8.0e-18 93.6 82 61.0
Carub.0002s2273 Capsella rubella HOM05D002484 ORTHO05D002541 1.0e-17 93.2 82 62.2
C06p32330 Brassica napus HOM05D002484 ORTHO05D002541 1.4e-17 92.8 82 61.0
C06p32380 Brassica napus HOM05D002484 ORTHO05D002541 1.8e-17 92.4 81 58.0
BcaC08g45552 Brassica carinata HOM05D002484 ORTHO05D002541 2.3e-17 92.0 81 58.0
C06p32340 Brassica napus HOM05D002484 ORTHO05D002541 2.3e-17 92.0 81 58.0
BcaC08g45554 Brassica carinata HOM05D002484 ORTHO05D002541 4.0e-17 91.3 81 56.8
BcaC08g45556 Brassica carinata HOM05D002484 ORTHO05D002541 4.0e-17 91.3 81 56.8
AL2G35840 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 5.2e-17 90.9 82 58.5
A02p20250 Brassica napus HOM05D002484 ORTHO05D002541 5.2e-17 90.9 82 57.3
C02p33650 Brassica napus HOM05D002484 ORTHO05D002541 5.2e-17 90.9 82 57.3
BolC2t09339H Brassica oleracea HOM05D002484 ORTHO05D002541 5.2e-17 90.9 82 57.3
BraA02t07059Z Brassica rapa HOM05D002484 ORTHO05D002541 5.2e-17 90.9 82 57.3
AL7G45400 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 6.8e-17 90.5 81 60.5
CARHR069370 Cardamine hirsuta HOM05D002484 ORTHO05D002541 6.8e-17 90.5 82 58.5
Carub.0002s2272 Capsella rubella HOM05D002484 ORTHO05D002541 8.8e-17 90.1 82 61.0
CARHR069270 Cardamine hirsuta HOM05D002484 ORTHO05D002541 8.8e-17 90.1 82 57.3
BcaC08g47074 Brassica carinata HOM05D002484 ORTHO05D002541 1.2e-16 89.7 82 57.3
Carub.0002s2274 Capsella rubella HOM05D002484 ORTHO05D002541 1.2e-16 89.7 82 57.3
BolC6t38355H Brassica oleracea HOM05D002484 ORTHO05D002541 1.5e-16 89.4 82 58.5
A07p41360 Brassica napus HOM05D002484 ORTHO05D002541 2.6e-16 88.6 82 57.3
BraA07t31669Z Brassica rapa HOM05D002484 ORTHO05D002541 2.6e-16 88.6 82 57.3
BcaB05g24945 Brassica carinata HOM05D002484 ORTHO05D002541 5.7e-16 87.4 82 56.1
BcaB05g24946 Brassica carinata HOM05D002484 ORTHO05D002541 5.7e-16 87.4 82 56.1
Aqoxy4G00457 Aquilegia oxysepala HOM05D002484 ORTHO05D002541 1.7e-15 85.9 81 55.6
Thhalv10019394m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 1.7e-15 85.9 82 56.1
CARHR069260 Cardamine hirsuta HOM05D002484 ORTHO05D002541 2.8e-15 85.1 81 56.8
A07p41400 Brassica napus HOM05D002484 ORTHO05D002541 3.7e-15 84.7 81 56.8
CARHR216420 Cardamine hirsuta HOM05D002484 ORTHO05D002541 3.7e-15 84.7 82 54.9
BcaC03g15628 Brassica carinata HOM05D002484 ORTHO05D002541 1.1e-14 83.2 94 47.9
Carub.0002s1189 Capsella rubella HOM05D002484 ORTHO05D002541 1.1e-14 83.2 84 54.8
CARHR069320 Cardamine hirsuta HOM05D002484 ORTHO05D002541 1.8e-14 82.4 84 53.6
Aqoxy5G01512 Aquilegia oxysepala HOM05D002484 ORTHO05D002541 2.4e-14 82.0 81 50.6
Thhalv10000535m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 2.4e-14 82.0 81 55.6
A02p20260 Brassica napus HOM05D002484 ORTHO05D002541 1.2e-13 79.7 84 53.6
C02p33640 Brassica napus HOM05D002484 ORTHO05D002541 1.2e-13 79.7 84 53.6
BolC2t09340H Brassica oleracea HOM05D002484 ORTHO05D002541 1.2e-13 79.7 84 53.6
BraA02t07060Z Brassica rapa HOM05D002484 ORTHO05D002541 1.2e-13 79.7 84 53.6
AL1G66200 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 5.9e-13 77.4 83 53.0
BcaC08g45551 Brassica carinata HOM05D002484 ORTHO05D002541 7.7e-13 77.0 81 54.3
CARHR069290 Cardamine hirsuta HOM05D002484 ORTHO05D002541 1.0e-12 76.6 82 54.9
CARHR069250 Cardamine hirsuta HOM05D002484 ORTHO05D002541 1.3e-12 76.3 82 56.1
AL2G35830 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 6.6e-12 73.9 52 63.5
CARHR069380 Cardamine hirsuta HOM05D002484 ORTHO05D002541 2.5e-11 72.0 78 52.6
A05p05350 Brassica napus HOM05D002484 ORTHO05D002541 4.2e-11 71.2 81 46.9
BraA05t19505Z Brassica rapa HOM05D002484 ORTHO05D002541 4.2e-11 71.2 81 46.9
BcaB02g08968 Brassica carinata HOM05D002484 ORTHO05D002541 2.8e-10 68.6 81 44.4
BcaC08g47323 Brassica carinata HOM05D002484 ORTHO05D002541 2.8e-10 68.6 41 68.3
A05p05280 Brassica napus HOM05D002484 ORTHO05D002541 3.6e-10 68.2 81 44.4
BcaB02g08940 Brassica carinata HOM05D002484 ORTHO05D002541 4.7e-10 67.8 81 44.4
BcaB02g08967 Brassica carinata HOM05D002484 ORTHO05D002541 1.4e-09 66.2 81 43.2
BcaC02g12223 Brassica carinata HOM05D002484 ORTHO05D002541 1.4e-09 66.2 81 42.0
A06p39910 Brassica napus HOM05D002484 ORTHO05D002541 1.4e-09 66.2 81 42.0
BcaC02g12225 Brassica carinata HOM05D002484 ORTHO05D002541 2.3e-09 65.5 81 43.2
C04p06270 Brassica napus HOM05D002484 ORTHO05D002541 2.3e-09 65.5 81 42.0
BraA06t26906Z Brassica rapa HOM05D002484 ORTHO05D002541 2.3e-09 65.5 81 40.7
Aqoxy4G00455 Aquilegia oxysepala HOM05D002484 ORTHO05D002541 3.0e-09 65.1 52 55.8
BcaB02g08969 Brassica carinata HOM05D002484 ORTHO05D002541 3.0e-09 65.1 81 43.2
C04p06240 Brassica napus HOM05D002484 ORTHO05D002541 3.0e-09 65.1 81 42.0
CARHR216400 Cardamine hirsuta HOM05D002484 ORTHO05D002541 3.0e-09 65.1 84 50.0
C04p06250 Brassica napus HOM05D002484 ORTHO05D002541 4.0e-09 64.7 81 42.0
BcaC02g12226 Brassica carinata HOM05D002484 ORTHO05D002541 6.8e-09 63.9 81 42.0
BolC4t22248H Brassica oleracea HOM05D002484 ORTHO05D002541 6.8e-09 63.9 81 40.7
C03p41190 Brassica napus HOM05D002484 ORTHO05D100480 1.2e-08 63.2 47 59.6
A05p05270 Brassica napus HOM05D002484 ORTHO05D002541 1.5e-08 62.8 81 40.7
AL1G65590 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 2.6e-08 62.0 82 42.7
AT1G55010 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 2.8e-07 58.5 82 40.2
Nitab4.5_0000023g0330 Nicotiana tabacum HOM05D002484 ORTHO05D002541 1.4e-06 56.2 48 54.2
COL.COLO4_25963 Corchorus olitorius HOM05D002484 ORTHO05D002541 7.0e-06 53.9 83 38.6


User provided reference genes

Program Settings