Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p20260 Brassica napus HOM05D002484 ORTHO05D002541 7.7e-42 173.3 83 100.0
C02p33640 Brassica napus HOM05D002484 ORTHO05D002541 7.7e-42 173.3 83 100.0
BolC2t09340H Brassica oleracea HOM05D002484 ORTHO05D002541 7.7e-42 173.3 83 100.0
BraA02t07060Z Brassica rapa HOM05D002484 ORTHO05D002541 7.7e-42 173.3 83 100.0
C06p49790 Brassica napus HOM05D002484 ORTHO05D002541 1.2e-26 122.9 83 72.3
BcaB02g07045 Brassica carinata HOM05D002484 ORTHO05D002541 5.9e-26 120.6 83 71.1
A02p20250 Brassica napus HOM05D002484 ORTHO05D002541 5.9e-26 120.6 83 72.3
C02p33650 Brassica napus HOM05D002484 ORTHO05D002541 5.9e-26 120.6 83 72.3
BolC2t09339H Brassica oleracea HOM05D002484 ORTHO05D002541 5.9e-26 120.6 83 72.3
BraA02t07059Z Brassica rapa HOM05D002484 ORTHO05D002541 5.9e-26 120.6 83 72.3
BcaC08g47321 Brassica carinata HOM05D002484 ORTHO05D002541 1.0e-25 119.8 83 68.7
BcaB05g24952 Brassica carinata HOM05D002484 ORTHO05D002541 1.3e-25 119.4 83 69.9
Sp5g30950 Schrenkiella parvula HOM05D002484 ORTHO05D002541 1.7e-25 119.0 83 69.9
Carub.0002s2273 Capsella rubella HOM05D002484 ORTHO05D002541 2.2e-25 118.6 83 67.5
A07p28700 Brassica napus HOM05D002484 ORTHO05D002541 2.9e-25 118.2 83 68.7
A07p41390 Brassica napus HOM05D002484 ORTHO05D002541 2.9e-25 118.2 83 69.9
BraA07t30510Z Brassica rapa HOM05D002484 ORTHO05D002541 2.9e-25 118.2 83 68.7
BraA07t31672Z Brassica rapa HOM05D002484 ORTHO05D002541 2.9e-25 118.2 83 69.9
Thhalv10019396m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 2.9e-25 118.2 83 68.7
BolC6t38355H Brassica oleracea HOM05D002484 ORTHO05D002541 3.8e-25 117.9 83 68.7
AT5G44420 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 5.0e-25 117.5 83 69.9
BcaB05g24945 Brassica carinata HOM05D002484 ORTHO05D002541 5.0e-25 117.5 83 71.1
BcaB05g24946 Brassica carinata HOM05D002484 ORTHO05D002541 5.0e-25 117.5 83 71.1
C06p32330 Brassica napus HOM05D002484 ORTHO05D002541 5.0e-25 117.5 83 68.7
CARHR069310 Cardamine hirsuta HOM05D002484 ORTHO05D002541 5.0e-25 117.5 83 69.9
AT1G75830 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 6.5e-25 117.1 83 67.5
BcaC03g15629 Brassica carinata HOM05D002484 ORTHO05D002541 6.5e-25 117.1 83 68.7
C02p33630 Brassica napus HOM05D002484 ORTHO05D002541 6.5e-25 117.1 83 68.7
BolC2t09341H Brassica oleracea HOM05D002484 ORTHO05D002541 6.5e-25 117.1 83 68.7
A02p20270 Brassica napus HOM05D002484 ORTHO05D002541 8.5e-25 116.7 83 68.7
BraA02t07061Z Brassica rapa HOM05D002484 ORTHO05D002541 8.5e-25 116.7 83 68.7
Sp5g30970 Schrenkiella parvula HOM05D002484 ORTHO05D002541 8.5e-25 116.7 83 68.7
CARHR069280 Cardamine hirsuta HOM05D002484 ORTHO05D002541 1.1e-24 116.3 83 68.7
AT2G26010 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 1.5e-24 115.9 83 68.7
CARHR284300 Cardamine hirsuta HOM05D002484 ORTHO05D002541 1.5e-24 115.9 83 68.7
AL2G35840 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 1.9e-24 115.5 83 66.3
Carub.0002s2272 Capsella rubella HOM05D002484 ORTHO05D002541 1.9e-24 115.5 83 66.3
CARHR069370 Cardamine hirsuta HOM05D002484 ORTHO05D002541 2.5e-24 115.2 83 63.9
A07p41370 Brassica napus HOM05D002484 ORTHO05D002541 3.2e-24 114.8 83 66.3
BraA07t31670Z Brassica rapa HOM05D002484 ORTHO05D002541 3.2e-24 114.8 83 66.3
Carub.0002s2268 Capsella rubella HOM05D002484 ORTHO05D002541 3.2e-24 114.8 83 67.5
Thhalv10019397m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 3.2e-24 114.8 83 66.3
AT2G26020 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 4.2e-24 114.4 83 67.5
Carub.0002s2269 Capsella rubella HOM05D002484 ORTHO05D002541 4.2e-24 114.4 83 67.5
Carub.0002s2274 Capsella rubella HOM05D002484 ORTHO05D002541 5.5e-24 114.0 83 65.1
Thhalv10019399m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 5.5e-24 114.0 83 67.5
AT5G44430 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 7.2e-24 113.6 83 68.7
Carub.0002s2271 Capsella rubella HOM05D002484 ORTHO05D002541 7.2e-24 113.6 83 67.5
BcaC08g45552 Brassica carinata HOM05D002484 ORTHO05D002541 9.4e-24 113.2 83 66.3
C06p32340 Brassica napus HOM05D002484 ORTHO05D002541 9.4e-24 113.2 83 66.3
Thhalv10019398m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 9.4e-24 113.2 83 66.3
BcaC08g47074 Brassica carinata HOM05D002484 ORTHO05D002541 1.2e-23 112.8 83 66.3
BcaB02g07044 Brassica carinata HOM05D002484 ORTHO05D002541 1.6e-23 112.5 83 66.3
A07p41360 Brassica napus HOM05D002484 ORTHO05D002541 1.6e-23 112.5 83 67.5
BraA07t31669Z Brassica rapa HOM05D002484 ORTHO05D002541 1.6e-23 112.5 83 67.5
Carub.0002s2270 Capsella rubella HOM05D002484 ORTHO05D002541 1.6e-23 112.5 83 66.3
CARHR069320 Cardamine hirsuta HOM05D002484 ORTHO05D002541 1.6e-23 112.5 82 61.0
BcaC03g15628 Brassica carinata HOM05D002484 ORTHO05D002541 2.7e-23 111.7 95 63.2
Thhalv10019395m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 4.7e-23 110.9 83 65.1
Aqoxy5G01512 Aquilegia oxysepala HOM05D002484 ORTHO05D002541 3.0e-22 108.2 83 62.7
CARHR069270 Cardamine hirsuta HOM05D002484 ORTHO05D002541 5.2e-22 107.5 83 62.7
Carub.0002s1189 Capsella rubella HOM05D002484 ORTHO05D002541 1.1e-21 106.3 85 64.7
Thhalv10019394m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 1.1e-21 106.3 83 62.7
C06p32380 Brassica napus HOM05D002484 ORTHO05D002541 2.6e-21 105.1 83 61.4
Carub.0007s3201 Capsella rubella HOM05D002484 ORTHO05D002541 3.3e-21 104.8 83 61.4
Thhalv10000662m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 4.4e-21 104.4 83 65.1
BcaC08g45554 Brassica carinata HOM05D002484 ORTHO05D002541 5.7e-21 104.0 83 60.2
BcaC08g45556 Brassica carinata HOM05D002484 ORTHO05D002541 5.7e-21 104.0 83 60.2
Aqoxy4G00457 Aquilegia oxysepala HOM05D002484 ORTHO05D002541 9.7e-21 103.2 83 61.4
AL7G45400 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 2.2e-20 102.1 83 60.2
BcaC08g45551 Brassica carinata HOM05D002484 ORTHO05D002541 2.8e-20 101.7 83 62.7
CARHR216420 Cardamine hirsuta HOM05D002484 ORTHO05D002541 9.1e-19 96.7 83 56.6
A07p41400 Brassica napus HOM05D002484 ORTHO05D002541 1.6e-18 95.9 83 59.0
AL1G66200 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 2.0e-18 95.5 84 58.3
CARHR069380 Cardamine hirsuta HOM05D002484 ORTHO05D002541 1.3e-17 92.8 79 58.2
CARHR069260 Cardamine hirsuta HOM05D002484 ORTHO05D002541 5.0e-17 90.9 83 57.8
AL2G35830 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 8.5e-17 90.1 62 64.5
A05p05270 Brassica napus HOM05D002484 ORTHO05D002541 1.9e-16 89.0 83 50.6
C04p06240 Brassica napus HOM05D002484 ORTHO05D002541 3.2e-16 88.2 83 51.8
CARHR216400 Cardamine hirsuta HOM05D002484 ORTHO05D002541 5.5e-16 87.4 83 57.8
BcaC02g12223 Brassica carinata HOM05D002484 ORTHO05D002541 9.4e-16 86.7 83 50.6
Aqoxy4G00455 Aquilegia oxysepala HOM05D002484 ORTHO05D002541 1.6e-15 85.9 60 61.7
BcaC02g12226 Brassica carinata HOM05D002484 ORTHO05D002541 1.6e-15 85.9 83 50.6
Thhalv10000535m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 1.6e-15 85.9 83 55.4
BcaB02g08968 Brassica carinata HOM05D002484 ORTHO05D002541 2.1e-15 85.5 83 50.6
CARHR069290 Cardamine hirsuta HOM05D002484 ORTHO05D002541 2.7e-15 85.1 83 55.4
BcaB02g08940 Brassica carinata HOM05D002484 ORTHO05D002541 3.6e-15 84.7 83 50.6
A05p05280 Brassica napus HOM05D002484 ORTHO05D002541 3.6e-15 84.7 82 48.8
C04p06270 Brassica napus HOM05D002484 ORTHO05D002541 3.6e-15 84.7 83 49.4
A06p39910 Brassica napus HOM05D002484 ORTHO05D002541 4.7e-15 84.3 83 49.4
BcaC02g12225 Brassica carinata HOM05D002484 ORTHO05D002541 6.1e-15 84.0 83 50.6
C04p06250 Brassica napus HOM05D002484 ORTHO05D002541 6.1e-15 84.0 83 49.4
BcaB02g08967 Brassica carinata HOM05D002484 ORTHO05D002541 1.0e-14 83.2 83 49.4
A05p05350 Brassica napus HOM05D002484 ORTHO05D002541 1.0e-14 83.2 83 49.4
BolC4t22248H Brassica oleracea HOM05D002484 ORTHO05D002541 1.0e-14 83.2 83 48.2
BraA05t19505Z Brassica rapa HOM05D002484 ORTHO05D002541 1.0e-14 83.2 83 49.4
BraA06t26906Z Brassica rapa HOM05D002484 ORTHO05D002541 1.0e-14 83.2 83 48.2
CARHR069250 Cardamine hirsuta HOM05D002484 ORTHO05D002541 2.3e-14 82.0 84 59.5
COL.COLO4_25963 Corchorus olitorius HOM05D002484 ORTHO05D002541 2.3e-14 82.0 83 48.2
BcaB02g08969 Brassica carinata HOM05D002484 ORTHO05D002541 5.2e-14 80.9 83 48.2
C02p33860 Brassica napus HOM05D002484 ORTHO05D002541 3.4e-13 78.2 84 53.6
BcaB05g24949 Brassica carinata HOM05D002484 ORTHO05D002541 4.4e-13 77.8 82 50.0
BolC2t09321H Brassica oleracea HOM05D002484 ORTHO05D002541 4.4e-13 77.8 82 52.4
Ciclev10030125m.g Citrus clementina HOM05D002484 ORTHO05D002541 8.3e-12 73.6 83 44.6
BcaC03g15604 Brassica carinata HOM05D002484 ORTHO05D002541 1.4e-11 72.8 87 49.4
BcaC08g47323 Brassica carinata HOM05D002484 ORTHO05D002541 4.1e-11 71.2 46 58.7
Ciclev10029711m.g Citrus clementina HOM05D002484 ORTHO05D002541 5.4e-11 70.9 83 39.8
BolC8t49576H Brassica oleracea HOM05D002484 ORTHO05D002541 2.0e-10 68.9 74 44.6
AL1G65590 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 7.7e-10 67.0 84 40.5
AT1G55010 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 1.0e-09 66.6 84 40.5
Carub.0002s0817 Capsella rubella HOM05D002484 ORTHO05D002541 8.5e-09 63.5 84 39.3
Psat4g203560 Pisum sativum HOM05D002484 ORTHO05D002541 8.5e-09 63.5 83 43.4
Ciclev10029712m.g Citrus clementina HOM05D002484 ORTHO05D002541 2.5e-08 62.0 83 37.3
Ciclev10029828m.g Citrus clementina HOM05D002484 ORTHO05D002541 2.5e-08 62.0 83 37.3
RcHm_v2.0_Chr6g0301471 Rosa chinensis HOM05D002484 ORTHO05D002541 9.4e-08 60.1 76 36.8
Peaxi162Scf00324g00715 Petunia axillaris HOM05D002484 ORTHO05D002541 1.2e-07 59.7 72 40.3
FAN20G1957 Fragaria x ananassa HOM05D002484 ORTHO05D002541 2.7e-07 58.5 49 46.9
Medtr8g012785 Medicago truncatula HOM05D002484 ORTHO05D002541 2.7e-07 58.5 53 49.1
Nn3g20428 Nelumbo nucifera HOM05D002484 ORTHO05D002541 2.7e-07 58.5 51 51.0
BcaB03g14925 Brassica carinata HOM05D002484 ORTHO05D002541 3.6e-07 58.2 52 44.2
BcaC08g46653 Brassica carinata HOM05D002484 ORTHO05D002541 3.6e-07 58.2 52 46.2
BcaC08g47076 Brassica carinata HOM05D002484 ORTHO05D002541 3.6e-07 58.2 46 69.6
COL.COLO4_25964 Corchorus olitorius HOM05D002484 ORTHO05D002541 3.6e-07 58.2 83 38.6
COL.COLO4_25966 Corchorus olitorius HOM05D002484 ORTHO05D002541 3.6e-07 58.2 72 38.9
Duzib248G1325 Durio zibethinus HOM05D001795 ORTHO05D002541 3.6e-07 58.2 52 42.3
MD08G1027500 Malus domestica HOM05D002484 ORTHO05D002541 3.6e-07 58.2 48 50.0
Medtr8g012835 Medicago truncatula HOM05D002484 ORTHO05D002541 6.1e-07 57.4 81 39.5
BraA07t31386Z Brassica rapa HOM05D002484 ORTHO05D002541 8.0e-07 57.0 86 33.7
Lj3g0015575 Lotus japonicus HOM05D002484 ORTHO05D002541 8.0e-07 57.0 53 45.3
Medtr8g012775 Medicago truncatula HOM05D002484 ORTHO05D002541 8.0e-07 57.0 53 49.1
Medtr8g012795 Medicago truncatula HOM05D002484 ORTHO05D002541 8.0e-07 57.0 82 37.8
TWI56G0984 Tripterygium wilfordii HOM05D002484 ORTHO05D002541 8.0e-07 57.0 69 36.2
Carub.0007s0108 Capsella rubella HOM05D002484 ORTHO05D002541 1.0e-06 56.6 82 34.1
HanXRQChr16g0505831 Helianthus annuus HOM05D002484 ORTHO05D002541 1.4e-06 56.2 77 39.0
arahy.Tifrunner.gnm1.ann1.81M2S6 Arachis hypogaea HOM05D002484 ORTHO05D002541 1.8e-06 55.8 72 38.9
C06p46130 Brassica napus HOM05D002484 ORTHO05D002541 1.8e-06 55.8 86 33.7
BolC6t39666H Brassica oleracea HOM05D002484 ORTHO05D002541 1.8e-06 55.8 86 33.7
Prupe.1G376000 Prunus persica HOM05D002484 ORTHO05D002541 1.8e-06 55.8 53 41.5
Glyma.18G027700 Glycine max HOM05D002484 ORTHO05D002541 2.3e-06 55.5 52 48.1
ECA236G0419 Erigeron canadensis HOM05D002484 ORTHO05D002541 3.0e-06 55.1 70 40.0
Peaxi162Scf00324g00722 Petunia axillaris HOM05D002484 ORTHO05D002541 3.0e-06 55.1 71 36.6
PGR031G2841 Punica granatum HOM05D002484 ORTHO05D002541 3.0e-06 55.1 77 39.0
Lsat_1_v5_gn_7_90700 Lactuca sativa HOM05D002484 ORTHO05D002541 4.0e-06 54.7 50 46.0
Nitab4.5_0000023g0290 Nicotiana tabacum HOM05D002484 ORTHO05D002541 5.2e-06 54.3 64 40.6
Peaxi162Scf00324g00716 Petunia axillaris HOM05D002484 ORTHO05D002541 6.8e-06 53.9 83 36.1
Solyc07g009260.3 Solanum lycopersicum HOM05D002484 ORTHO05D002541 6.8e-06 53.9 75 36.0
TPR.G17112 Trifolium pratense HOM05D002484 ORTHO05D002541 6.8e-06 53.9 49 49.0
Lsat_1_v5_gn_7_90800 Lactuca sativa HOM05D002484 ORTHO05D002541 8.8e-06 53.5 48 45.8


User provided reference genes

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