Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p31290 Brassica napus HOM05D029526 ORTHO05D017644 1.2e-50 203.0 106 100.0
BolC2t09171H Brassica oleracea HOM05D001346 ORTHO05D017644 1.0e-38 163.3 96 91.7
BcaC03g15456 Brassica carinata HOM05D001346 ORTHO05D014100 1.9e-29 132.5 90 82.2
C08p06170 Brassica napus HOM05D029526 ORTHO05D017644 6.8e-27 124.0 76 92.1
BolC8t47461H Brassica oleracea HOM05D029526 ORTHO05D017644 6.8e-27 124.0 76 92.1
BraA06t24702Z Brassica rapa HOM05D000711 ORTHO05D000545 2.0e-23 112.5 87 74.7
BcaB01g03465 Brassica carinata HOM05D000039 ORTHO05D000370 3.5e-23 111.7 77 83.1
A06p15910 Brassica napus HOM05D000711 ORTHO05D000545 6.0e-23 110.9 87 73.6
C05p18220 Brassica napus HOM05D000711 ORTHO05D000545 5.0e-22 107.8 87 71.3
BolC5t30529H Brassica oleracea HOM05D000711 ORTHO05D000545 1.1e-21 106.7 87 71.3
A02p34410 Brassica napus HOM05D002856 ORTHO05D017644 2.6e-18 95.5 66 81.8
BraA02t08452Z Brassica rapa HOM05D002856 ORTHO05D017644 2.6e-18 95.5 66 81.8
C09p11400 Brassica napus HOM05D002856 ORTHO05D017644 5.8e-18 94.4 66 81.8
Sp1g17600 Schrenkiella parvula HOM05D000711 ORTHO05D000545 5.8e-18 94.4 87 60.9
BolC9t54028H Brassica oleracea HOM05D002856 ORTHO05D017644 1.3e-17 93.2 66 80.3
AL1G32500 Arabidopsis lyrata HOM05D000711 ORTHO05D000545 1.4e-16 89.7 87 56.3
BcaC08g46871 Brassica carinata HOM05D000711 ORTHO05D000545 1.6e-12 76.3 58 74.1
BolC6t39890H Brassica oleracea HOM05D000711 ORTHO05D000545 1.6e-12 76.3 58 74.1
CARHR020300 Cardamine hirsuta HOM05D000711 ORTHO05D000545 1.5e-10 69.7 88 50.0
AT1G19790 Arabidopsis thaliana HOM05D000711 ORTHO05D000545 2.0e-10 69.3 87 49.4
A03p60940 Brassica napus HOM05D001346 ORTHO05D014100 2.2e-09 65.9 62 66.1
A10p05810 Brassica napus HOM05D001346 ORTHO05D014100 2.2e-09 65.9 62 66.1
Thhalv10009634m.g Eutrema salsugineum HOM05D000711 ORTHO05D000545 4.1e-08 61.6 59 61.0
C07p23850 Brassica napus HOM05D000711 ORTHO05D000545 1.6e-07 59.7 87 48.3
BcaB03g14377 Brassica carinata HOM05D000711 ORTHO05D000545 4.6e-07 58.2 87 47.1
BolC7t42907H Brassica oleracea HOM05D000711 ORTHO05D000545 4.6e-07 58.2 87 47.1
BcaC04g23172 Brassica carinata HOM05D029526 ORTHO05D017644 1.3e-06 56.6 38 86.8
C07p07530 Brassica napus HOM05D000711 ORTHO05D021802 3.9e-06 55.1 39 76.9
BolC7t41171H Brassica oleracea HOM05D000711 ORTHO05D021802 3.9e-06 55.1 39 76.9
BcaB04g17075 Brassica carinata HOM05D002856 ORTHO05D021802 5.1e-06 54.7 76 50.0


User provided reference genes

Program Settings