Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p27250 Brassica napus HOM05D021342 ORTHO05D024513 1.0e-55 219.9 116 100.0
C02p27210 Brassica napus HOM05D021342 ORTHO05D024513 2.2e-55 218.8 116 99.1
BolC2t08781H Brassica oleracea HOM05D021342 ORTHO05D024513 6.7e-52 207.2 116 94.8
A02p16320 Brassica napus HOM05D021342 ORTHO05D024513 4.2e-46 188.0 116 88.8
BraA02t06690Z Brassica rapa HOM05D021342 ORTHO05D024513 4.2e-46 188.0 116 88.8
Sp5g25180 Schrenkiella parvula HOM05D000629 ORTHO05D000576 2.9e-23 112.1 104 59.6
Aa31LG4G10820 Aethionema arabicum HOM05D000629 ORTHO05D000576 5.0e-23 111.3 109 59.6
Thhalv10018014m.g Eutrema salsugineum HOM05D000629 ORTHO05D000576 4.2e-22 108.2 104 57.7
BcaC08g46454 Brassica carinata HOM05D000629 ORTHO05D000576 3.6e-21 105.1 100 61.0
A07p36470 Brassica napus HOM05D000629 ORTHO05D000576 3.6e-21 105.1 100 61.0
C06p43930 Brassica napus HOM05D000629 ORTHO05D000576 3.6e-21 105.1 100 61.0
BolC6t39465H Brassica oleracea HOM05D000629 ORTHO05D000576 3.6e-21 105.1 100 61.0
BraA07t31218Z Brassica rapa HOM05D000629 ORTHO05D000576 3.6e-21 105.1 100 61.0
A07p31240 Brassica napus HOM05D000629 ORTHO05D000576 2.3e-20 102.4 98 59.2
BraA07t30756Z Brassica rapa HOM05D000629 ORTHO05D000576 2.3e-20 102.4 98 59.2
BcaC08g45844 Brassica carinata HOM05D000629 ORTHO05D000576 3.0e-20 102.1 98 59.2
BolC6t38755H Brassica oleracea HOM05D000629 ORTHO05D000576 3.0e-20 102.1 98 59.2
C06p36350 Brassica napus HOM05D000629 ORTHO05D000576 5.2e-20 101.3 91 61.5
Carub.0002s1673 Capsella rubella HOM05D000629 ORTHO05D000576 5.2e-20 101.3 91 61.5
BcaB03g14783 Brassica carinata HOM05D000629 ORTHO05D000576 8.8e-20 100.5 100 57.0
BcaB03g15529 Brassica carinata HOM05D000629 ORTHO05D000576 1.2e-19 100.1 98 58.2
AL2G29300 Arabidopsis lyrata HOM05D000629 ORTHO05D000576 3.4e-19 98.6 104 54.8
AT1G70060 Arabidopsis thaliana HOM05D000629 ORTHO05D000576 1.4e-17 93.2 98 54.1
AL1G38020 Arabidopsis lyrata HOM05D000629 ORTHO05D000576 7.7e-16 87.4 104 49.0
Aa31LG7G7960 Aethionema arabicum HOM05D000629 ORTHO05D000576 6.5e-15 84.3 100 50.0
CARHR024590 Cardamine hirsuta HOM05D000629 ORTHO05D000576 8.5e-15 84.0 100 51.0
C02p27230 Brassica napus HOM05D021342 ORTHO05D102009 1.1e-14 83.6 48 91.7
Carub.0001s2368 Capsella rubella HOM05D000629 ORTHO05D000576 1.2e-13 80.1 100 47.0
AL1G36780 Arabidopsis lyrata HOM05D000629 ORTHO05D000576 1.6e-13 79.7 100 50.0
THA.LOC104822068 Tarenaya hassleriana HOM05D000629 ORTHO05D000576 1.6e-13 79.7 107 45.8
AT1G24190 Arabidopsis thaliana HOM05D000629 ORTHO05D000576 1.0e-12 77.0 100 48.0
BcaC03g15153 Brassica carinata HOM05D000629 ORTHO05D000576 3.0e-12 75.5 72 61.1
BolC2t08785H Brassica oleracea HOM05D000629 ORTHO05D000576 1.2e-11 73.6 72 61.1
THA.LOC104808829 Tarenaya hassleriana HOM05D000629 ORTHO05D000576 1.3e-10 70.1 45 73.3
C02p27270 Brassica napus HOM05D000629 ORTHO05D000576 2.0e-08 62.8 77 49.4
BolC2t08784H Brassica oleracea HOM05D001350 ORTHO05D001091 7.7e-08 60.8 36 86.1
AagrBONN_evm.TU.Sc2ySwM_362.209 Anthoceros agrestis HOM05D000629 ORTHO05D000576 5.5e-06 54.7 47 57.4
CDE06G1214 Ceratophyllum demersum HOM05D000629 ORTHO05D000576 5.5e-06 54.7 92 39.1


User provided reference genes

Program Settings