Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 3.2e-248 861.3 432 100.0
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 7.1e-248 860.1 432 99.8
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 1.2e-247 859.4 432 99.8
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 1.7e-246 855.5 432 99.1
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 4.3e-237 824.3 431 96.1
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 7.6e-226 786.9 423 92.9
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 4.9e-225 784.3 432 90.7
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 7.1e-216 753.8 427 89.2
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 4.6e-215 751.1 423 86.8
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 3.0e-214 748.4 423 88.2
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 5.7e-213 744.2 423 87.9
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 9.1e-195 683.7 425 80.7
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 1.7e-193 679.5 435 78.2
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 3.3e-181 638.6 429 73.9
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 1.7e-180 636.3 433 73.4
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 7.0e-179 630.9 433 72.3
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 1.2e-178 630.2 419 74.2
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 3.5e-178 628.6 424 73.6
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 1.5e-176 623.2 427 72.4
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 1.9e-176 622.9 421 73.6
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 3.2e-176 622.1 421 73.4
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 1.2e-175 620.2 421 74.3
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 1.6e-175 619.8 428 72.9
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 2.1e-175 619.4 433 70.7
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 2.7e-175 619.0 428 72.7
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 3.6e-175 618.6 425 72.0
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 4.7e-175 618.2 433 71.1
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 1.0e-174 617.1 454 70.0
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 2.3e-174 615.9 425 71.8
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 2.3e-174 615.9 428 72.2
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 5.2e-174 614.8 422 73.5
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 1.5e-173 613.2 422 72.5
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 3.4e-173 612.1 433 69.7
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 4.4e-173 611.7 423 71.4
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 7.5e-173 610.9 422 72.0
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 9.8e-173 610.5 421 73.2
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 9.8e-173 610.5 427 72.4
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 1.3e-172 610.1 422 71.8
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 3.7e-172 608.6 428 71.3
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 3.7e-172 608.6 428 71.5
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 4.8e-172 608.2 433 69.3
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 6.3e-172 607.8 422 72.7
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 2.4e-171 605.9 429 70.4
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 3.1e-171 605.5 423 72.1
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 4.1e-171 605.1 421 71.7
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 5.4e-171 604.7 428 71.3
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 9.1e-171 604.0 428 70.6
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 4.5e-170 601.7 428 70.8
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 1.7e-169 599.7 429 70.6
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 1.7e-169 599.7 428 70.6
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 3.8e-169 598.6 424 69.8
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 5.0e-169 598.2 424 70.0
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 5.0e-169 598.2 423 69.7
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 6.6e-169 597.8 428 69.2
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 2.5e-168 595.9 423 70.9
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 2.5e-168 595.9 461 67.0
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 4.2e-168 595.1 427 70.0
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 5.5e-168 594.7 424 69.8
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 7.2e-168 594.3 439 69.2
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 7.2e-168 594.3 431 70.5
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 7.2e-168 594.3 424 69.6
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 3.6e-167 592.0 427 69.8
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 4.7e-167 591.7 422 68.7
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 6.1e-167 591.3 424 69.1
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 1.0e-166 590.5 421 71.0
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 1.4e-166 590.1 433 68.8
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 1.4e-166 590.1 433 68.8
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 1.8e-166 589.7 431 70.1
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 2.0e-165 586.3 416 70.7
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 7.5e-165 584.3 447 65.5
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 2.2e-164 582.8 425 69.2
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 2.2e-164 582.8 423 68.8
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 1.8e-163 579.7 452 65.9
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 1.6e-162 576.6 471 62.6
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 4.5e-162 575.1 425 67.5
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 7.8e-162 574.3 424 66.0
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 2.9e-161 572.4 423 69.3
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 3.9e-161 572.0 428 67.8
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 1.1e-160 570.5 436 66.3
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 1.5e-160 570.1 425 65.4
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 2.5e-160 569.3 425 67.3
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 3.6e-159 565.5 422 66.4
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 8.0e-159 564.3 422 66.4
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 8.0e-159 564.3 424 65.8
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 8.0e-159 564.3 424 65.8
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 1.4e-158 563.5 532 57.3
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 1.8e-158 563.1 432 70.8
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 8.9e-158 560.8 421 64.1
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 2.0e-157 559.7 429 64.3
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 6.4e-156 554.7 421 64.1
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 2.4e-155 552.7 423 64.3
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 4.1e-155 552.0 421 66.7
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 1.0e-153 547.4 422 66.1
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.3e-153 547.0 422 66.6
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.7e-153 546.6 422 66.6
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 8.6e-153 544.3 422 66.4
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 1.1e-152 543.9 421 65.3
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 3.4e-149 532.3 427 61.8
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 7.3e-144 514.6 438 60.3
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 3.6e-143 512.3 418 61.2
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 6.8e-142 508.1 428 58.2
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 2.2e-140 503.1 422 60.2
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 1.6e-138 496.9 337 74.8
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 3.9e-137 492.3 424 58.3
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 8.6e-137 491.1 431 57.8
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 2.7e-130 469.5 422 58.5
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 7.8e-130 468.0 358 65.1
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 7.8e-130 468.0 443 59.1
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 8.1e-127 458.0 425 54.8
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 4.0e-126 455.7 426 53.1
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 5.8e-125 451.8 298 73.5
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 2.8e-119 433.0 351 63.2
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 1.3e-116 424.1 426 56.6
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 5.4e-115 418.7 426 48.8
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 2.7e-114 416.4 264 76.1
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 5.5e-107 392.1 258 74.4
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 4.8e-103 379.0 291 70.8
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 1.8e-86 323.9 194 81.4
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 5.9e-85 318.9 427 41.7
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 2.4e-70 270.4 235 55.3
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 2.7e-58 230.3 185 65.9
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 7.2e-51 205.7 102 100.0
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 7.0e-38 162.5 139 61.2
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 1.6e-29 134.8 91 65.9
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 8.6e-28 129.0 96 63.5
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 6.8e-25 119.4 89 59.6
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 1.2e-13 82.0 353 23.2
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 3.1e-09 67.4 90 46.7
CSS0028086 Camellia sinensis var. sinensis HOM05D001336 ORTHO05D001211 2.4e-06 57.8 35 68.6


User provided reference genes

Program Settings