Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p17970 Brassica napus HOM05D004367 ORTHO05D004937 7.9e-90 334.0 194 100.0
BcaB05g22072 Brassica carinata HOM05D004367 ORTHO05D004937 8.5e-76 287.3 186 86.6
BcaC03g14387 Brassica carinata HOM05D004367 ORTHO05D004937 6.1e-74 281.2 189 92.1
Sp6g15840 Schrenkiella parvula HOM05D004367 ORTHO05D004937 3.1e-70 268.9 145 92.4
AL8G28710 Arabidopsis lyrata HOM05D004367 ORTHO05D004937 5.3e-70 268.1 146 89.0
BcaC04g20419 Brassica carinata HOM05D004367 ORTHO05D004937 9.1e-70 267.3 150 90.0
C09p43730 Brassica napus HOM05D004367 ORTHO05D004937 9.1e-70 267.3 150 90.0
BolC9t57258H Brassica oleracea HOM05D004367 ORTHO05D004937 9.1e-70 267.3 150 90.0
BcaB08g35738 Brassica carinata HOM05D004367 ORTHO05D004937 2.7e-69 265.8 150 89.3
A10p11150 Brassica napus HOM05D004367 ORTHO05D004937 7.7e-69 264.2 150 88.7
BraA10t43208Z Brassica rapa HOM05D004367 ORTHO05D004937 7.7e-69 264.2 150 88.7
AT5G53770 Arabidopsis thaliana HOM05D004367 ORTHO05D004937 2.7e-66 255.8 147 86.4
Thhalv10013073m.g Eutrema salsugineum HOM05D004367 ORTHO05D004937 1.8e-65 253.1 145 84.1
Carub.0008s1407 Capsella rubella HOM05D004367 ORTHO05D004937 3.0e-65 252.3 148 85.8
CARHR266920 Cardamine hirsuta HOM05D004367 ORTHO05D004937 4.4e-64 248.4 147 83.7
Aa31LG3G10140 Aethionema arabicum HOM05D004367 ORTHO05D004937 3.6e-58 228.8 145 77.9
THA.LOC104799923 Tarenaya hassleriana HOM05D004367 ORTHO05D004937 5.2e-49 198.4 140 68.6
Sabra16G0262900 Salix brachista HOM05D004367 ORTHO05D004937 2.7e-45 186.0 153 65.4
Atru.chr2.2673 Acer truncatum HOM05D004367 ORTHO05D004937 4.6e-45 185.3 149 65.1
Potri.001G400800 Populus trichocarpa HOM05D004367 ORTHO05D004937 1.0e-44 184.1 127 73.2
TAR624G0790 Trochodendron aralioides HOM05D004367 ORTHO05D004937 1.0e-44 184.1 147 64.6
Cfa020594 Carpinus fangiana HOM05D004367 ORTHO05D004937 2.3e-44 183.0 148 64.9
Actinidia12812 Actinidia chinensis HOM05D004367 ORTHO05D004937 3.0e-44 182.6 149 63.8
Hma1.2p1_0480F.1_g161800 Hydrangea macrophylla HOM05D004367 ORTHO05D004937 3.0e-44 182.6 148 64.9
Hma1.2p1_0480F.1_g161810 Hydrangea macrophylla HOM05D004367 ORTHO05D004937 3.0e-44 182.6 148 64.9
TWI39G0928 Tripterygium wilfordii HOM05D004367 ORTHO05D004937 6.6e-44 181.4 151 66.2
vmacro11860 Vaccinium macrocarpon HOM05D004367 ORTHO05D004937 6.6e-44 181.4 150 62.0
vmacro22868 Vaccinium macrocarpon HOM05D004367 ORTHO05D004937 6.6e-44 181.4 150 62.0
Eucgr.F01119 Eucalyptus grandis HOM05D004367 ORTHO05D004937 8.6e-44 181.0 146 65.8
Ciclev10008024m.g Citrus clementina HOM05D004367 ORTHO05D004937 1.1e-43 180.6 150 62.0
Lj1A844G36 Lonicera japonica HOM05D004367 ORTHO05D004937 1.5e-43 180.3 125 68.8
Phvul.005G070800 Phaseolus vulgaris HOM05D004367 ORTHO05D004937 1.5e-43 180.3 146 65.1
Cpa.g.sc80.55 Carica papaya HOM05D004367 ORTHO05D004937 1.9e-43 179.9 150 64.7
HanXRQChr12g0361521 Helianthus annuus HOM05D004367 ORTHO05D004937 2.5e-43 179.5 150 63.3
Sopen10g002900 Solanum pennellii HOM05D004367 ORTHO05D004937 2.5e-43 179.5 146 63.7
Ca_01836_v3 Cicer arietinum L. HOM05D004367 ORTHO05D004937 3.3e-43 179.1 129 66.7
Rhsim06G0197900 Rhododendron simsii HOM05D004367 ORTHO05D004937 3.3e-43 179.1 134 67.2
Duzib213G0391 Durio zibethinus HOM05D004367 ORTHO05D004937 4.3e-43 178.7 150 61.3
Medtr2g079330 Medicago truncatula HOM05D004367 ORTHO05D004937 5.6e-43 178.3 138 65.9
TWI38G0759 Tripterygium wilfordii HOM05D004367 ORTHO05D004937 5.6e-43 178.3 128 68.0
ECA234G0664 Erigeron canadensis HOM05D004367 ORTHO05D004937 7.3e-43 177.9 146 64.4
Glyma.13G277700 Glycine max HOM05D004367 ORTHO05D004937 7.3e-43 177.9 130 68.5
Gorai.002G071000 Gossypium raimondii HOM05D004367 ORTHO05D004937 7.3e-43 177.9 135 67.4
Gohir.D01G051200 Gossypium hirsutum HOM05D004367 ORTHO05D004937 9.5e-43 177.6 135 67.4
Lsat_1_v5_gn_5_127821 Lactuca sativa HOM05D004367 ORTHO05D004937 9.5e-43 177.6 125 68.8
Psat5g242760 Pisum sativum HOM05D004367 ORTHO05D004937 9.5e-43 177.6 153 60.8
Thecc.07G087300 Theobroma cacao HOM05D004367 ORTHO05D004937 9.5e-43 177.6 127 70.1
COL.COLO4_09395 Corchorus olitorius HOM05D004367 ORTHO05D004937 1.6e-42 176.8 146 63.7
Sed0004687 Sechium edule HOM05D004367 ORTHO05D004937 1.6e-42 176.8 150 60.7
Hund22921 Selenicereus undatus HOM05D004367 ORTHO05D004937 2.1e-42 176.4 149 63.8
CiPaw.11G168700 Carya illinoinensis HOM05D004367 ORTHO05D004937 3.6e-42 175.6 146 63.7
PGSC0003DMG400025036 Solanum tuberosum HOM05D004367 ORTHO05D004937 3.6e-42 175.6 149 61.7
Nitab4.5_0000207g0150 Nicotiana tabacum HOM05D004367 ORTHO05D004937 4.7e-42 175.3 147 60.5
Solyc10g006990.3 Solanum lycopersicum HOM05D004367 ORTHO05D004937 6.2e-42 174.9 146 61.6
vmacro18312 Vaccinium macrocarpon HOM05D004367 ORTHO05D004937 6.2e-42 174.9 150 58.7
GSVIVG01014349001 Vitis vinifera HOM05D004367 ORTHO05D004937 6.2e-42 174.9 149 63.1
CSS0040030 Camellia sinensis var. sinensis HOM05D004367 ORTHO05D004937 8.0e-42 174.5 146 63.0
CSS0040505 Camellia sinensis var. sinensis HOM05D004367 ORTHO05D004937 1.0e-41 174.1 146 63.0
Lj3g0015758 Lotus japonicus HOM05D004367 ORTHO05D004937 1.4e-41 173.7 132 66.7
MELO3C016705.2 Cucumis melo HOM05D004367 ORTHO05D004937 1.8e-41 173.3 134 63.4
TPR.G38993 Trifolium pratense HOM05D004367 ORTHO05D004937 1.8e-41 173.3 127 66.1
arahy.Tifrunner.gnm1.ann1.6ZWE2K Arachis hypogaea HOM05D004367 ORTHO05D004937 2.3e-41 172.9 148 63.5
Nitab4.5_0002383g0110 Nicotiana tabacum HOM05D004367 ORTHO05D004937 2.3e-41 172.9 131 62.6
arahy.Tifrunner.gnm1.ann1.SV3A8G Arachis hypogaea HOM05D004367 ORTHO05D004937 3.1e-41 172.6 127 70.1
MSTRG.15226 Avicennia marina HOM05D004367 ORTHO05D004937 4.0e-41 172.2 149 58.4
CsaV3_4G033760 Cucumis sativus L. HOM05D004367 ORTHO05D004937 5.2e-41 171.8 147 59.2
Nn1g06556 Nelumbo nucifera HOM05D004367 ORTHO05D004937 6.8e-41 171.4 128 68.0
Manes.03G110700 Manihot esculenta HOM05D004367 ORTHO05D004937 8.9e-41 171.0 134 65.7
EL10Ac4g08166 Beta vulgaris HOM05D004367 ORTHO05D004937 1.2e-40 170.6 131 66.4
Lalb_Chr25g0286441 Lupinus albus HOM05D004367 ORTHO05D004937 3.4e-40 169.1 137 64.2
Aqoxy4G00819 Aquilegia oxysepala HOM05D004367 ORTHO05D004937 7.5e-40 167.9 133 64.7
ClCG11G018120 Citrullus lanatus HOM05D004367 ORTHO05D004937 9.8e-40 167.5 129 64.3
DCAR_017144 Daucus carota HOM05D004367 ORTHO05D004937 9.8e-40 167.5 148 62.8
Prupe.4G182900 Prunus persica HOM05D004367 ORTHO05D004937 9.8e-40 167.5 130 65.4
SalBow8G0254 Salvia bowleyana HOM05D004367 ORTHO05D004937 1.3e-39 167.2 146 60.3
Dinv20169 Davidia involucrata HOM05D000397 ORTHO05D004937 1.7e-39 166.8 134 63.4
Oeu060551.2 Olea europaea HOM05D004367 ORTHO05D004937 2.9e-39 166.0 133 60.2
MD03G1226500 Malus domestica HOM05D004367 ORTHO05D004937 3.7e-39 165.6 146 61.6
Ah.06g184060 Amaranthus hybridus HOM05D004367 ORTHO05D004937 6.4e-39 164.9 133 63.2
Oeu005412.1 Olea europaea HOM05D004367 ORTHO05D004937 1.1e-38 164.1 148 54.1
PSO210G1788 Papaver somniferum HOM05D004367 ORTHO05D004937 1.1e-38 164.1 128 64.1
MBI07_g32654_MAGBIO Magnolia biondii HOM05D004367 ORTHO05D004937 2.4e-38 162.9 117 68.4
MD11G1244600 Malus domestica HOM05D004367 ORTHO05D004937 2.4e-38 162.9 146 61.0
Sc16g0006960 Simmondsia chinensis HOM05D004367 ORTHO05D004937 3.2e-38 162.5 147 57.8
PGR083G2352 Punica granatum HOM05D004367 ORTHO05D004937 4.1e-38 162.2 151 58.3
FvH4_3g20190 Fragaria vesca HOM05D004367 ORTHO05D004937 9.2e-38 161.0 146 61.6
unitig_899.g15291 Utricularia gibba HOM05D004367 ORTHO05D004937 1.6e-37 160.2 152 53.9
FAN16G0302 Fragaria x ananassa HOM05D004367 ORTHO05D004937 3.5e-37 159.1 154 57.8
RcHm_v2.0_Chr5g0034001 Rosa chinensis HOM05D004367 ORTHO05D004937 1.0e-36 157.5 146 58.9
HPP92_007964 Vanilla planifolia HOM05D004367 ORTHO05D004937 1.1e-35 154.1 127 60.6
Migut.M00812 Erythranthe guttata HOM05D004367 ORTHO05D004937 7.3e-35 151.4 118 58.5
Gohir.A01G064120 Gossypium hirsutum HOM05D004367 ORTHO05D004937 2.1e-34 149.8 150 58.0
QL08p021548 Quercus lobata HOM05D004367 ORTHO05D004937 3.6e-34 149.1 223 43.9
Cc00_g35090 Coffea canephora HOM05D004367 ORTHO05D004937 1.8e-33 146.7 130 60.0
FAN21G3330 Fragaria x ananassa HOM05D004367 ORTHO05D004937 1.7e-31 140.2 92 76.1
Dinv04310 Davidia involucrata HOM05D004367 ORTHO05D004937 8.3e-31 137.9 147 54.4
FAN25G3266 Fragaria x ananassa HOM05D004367 ORTHO05D004937 8.3e-31 137.9 192 46.4
AUR62034287 Chenopodium quinoa HOM05D004367 ORTHO05D004937 1.4e-30 137.1 129 58.1
SGA_v2.0_scaffold73G24268 Striga asiatica HOM05D004367 ORTHO05D004937 9.2e-30 134.4 145 48.3
Atru.chr2.2651 Acer truncatum HOM05D004367 ORTHO05D004937 2.3e-28 129.8 126 57.9
Actinidia09681 Actinidia chinensis HOM05D004367 ORTHO05D004937 2.5e-27 126.3 116 59.5
HPP92_008014 Vanilla planifolia HOM05D004367 ORTHO05D004937 3.3e-27 125.9 133 51.1
ATR0730G126 Amborella trichopoda HOM05D004367 ORTHO05D004937 2.8e-26 122.9 147 48.3
AUR62029381 Chenopodium quinoa HOM05D004367 ORTHO05D004937 3.6e-26 122.5 249 35.7
CDE10G0244 Ceratophyllum demersum HOM05D004367 ORTHO05D004937 3.1e-25 119.4 116 55.2
Zm00001eb157140 Zea mays HOM05D004367 ORTHO05D004937 4.4e-24 115.5 146 43.2
QL05p086109 Quercus lobata HOM05D004367 ORTHO05D004937 2.9e-23 112.8 107 60.7
CSS0029491 Camellia sinensis var. sinensis HOM05D004367 ORTHO05D004937 8.4e-23 111.3 121 51.2
CSS0023608 Camellia sinensis var. sinensis HOM05D004367 ORTHO05D004937 4.3e-19 99.0 111 51.4
VMungo1080G1289 Vigna mungo HOM05D004367 ORTHO05D004937 7.3e-19 98.2 97 55.7
SGA_v2.0_scaffold34G13821 Striga asiatica HOM05D004367 ORTHO05D004937 1.4e-17 94.0 144 38.2
SEGI_01564 Sequoiadendron giganteum HOM05D004367 ORTHO05D004937 8.9e-17 91.3 151 38.4
Ciclev10008854m.g Citrus clementina HOM05D004367 ORTHO05D004937 1.3e-15 87.4 63 65.1
AagrBONN_evm.TU.Sc2ySwM_362.745 Anthoceros agrestis HOM05D004367 ORTHO05D004937 4.6e-13 79.0 157 38.9
BolC2t07929H Brassica oleracea HOM05D004367 ORTHO05D004937 1.3e-12 77.4 36 97.2
SEGI_38687 Sequoiadendron giganteum HOM05D004367 ORTHO05D004937 1.3e-12 77.4 75 53.3
SMO356G0731 Selaginella moellendorffii HOM05D004367 ORTHO05D004937 8.7e-12 74.7 82 51.2
Mapoly0006s0037 Marchantia polymorpha HOM05D004367 ORTHO05D004937 1.3e-10 70.9 133 35.3
VMungo1080G0845 Vigna mungo HOM05D004367 ORTHO05D004937 1.1e-09 67.8 36 80.6
Pp3c24_20390 Physcomitrium patens HOM05D004367 ORTHO05D004937 1.8e-09 67.0 76 48.7
CBR_g262 Chara braunii HOM05D004367 ORTHO05D004937 4.0e-09 65.9 71 50.7
QL05p086116 Quercus lobata HOM05D004367 ORTHO05D004937 1.2e-08 64.3 36 75.0
Peaxi162Scf00027g02615 Petunia axillaris HOM05D004367 ORTHO05D004937 2.4e-06 56.6 35 71.4


User provided reference genes

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