Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p15380 Brassica napus HOM05D004098 ORTHO05D005215 1.1e-84 316.6 156 100.0
BraA03t10663Z Brassica rapa HOM05D004098 ORTHO05D005215 1.5e-27 126.7 136 59.6
Sp6g18140 Schrenkiella parvula HOM05D004098 ORTHO05D005215 1.5e-27 126.7 136 60.3
A03p13590 Brassica napus HOM05D004098 ORTHO05D005215 1.3e-26 123.6 136 58.8
C03p15880 Brassica napus HOM05D004098 ORTHO05D005215 1.3e-26 123.6 136 58.8
BolC3t14019H Brassica oleracea HOM05D004098 ORTHO05D005215 1.3e-26 123.6 136 58.8
BolC9t57610H Brassica oleracea HOM05D004098 ORTHO05D005215 3.8e-26 122.1 136 58.1
AL8G31920 Arabidopsis lyrata HOM05D004098 ORTHO05D005215 6.5e-26 121.3 136 58.1
BcaC01g06414 Brassica carinata HOM05D004098 ORTHO05D005215 6.5e-26 121.3 136 58.1
Thhalv10012791m.g Eutrema salsugineum HOM05D004098 ORTHO05D005215 6.5e-26 121.3 136 58.1
AT5G56290 Arabidopsis thaliana HOM05D004098 ORTHO05D005215 1.1e-25 120.6 136 58.1
BcaB01g04390 Brassica carinata HOM05D004098 ORTHO05D005215 1.1e-25 120.6 136 57.4
Carub.0008s1661 Capsella rubella HOM05D004098 ORTHO05D005215 1.4e-25 120.2 136 58.1
BcaC04g20111 Brassica carinata HOM05D004098 ORTHO05D005215 1.9e-25 119.8 136 57.4
Aa31LG3G12200 Aethionema arabicum HOM05D004098 ORTHO05D005215 3.2e-25 119.0 137 56.2
CARHR269690 Cardamine hirsuta HOM05D004098 ORTHO05D005215 3.2e-25 119.0 136 57.4
A10p13580 Brassica napus HOM05D004098 ORTHO05D005215 4.2e-25 118.6 137 58.4
BraA10t43460Z Brassica rapa HOM05D004098 ORTHO05D005215 4.2e-25 118.6 137 58.4
C09p47570 Brassica napus HOM05D004098 ORTHO05D005215 5.1e-23 111.7 119 60.5
THA.LOC104813473 Tarenaya hassleriana HOM05D004098 ORTHO05D005215 8.8e-23 110.9 137 54.0
BcaB05g22257 Brassica carinata HOM05D004098 ORTHO05D005215 4.4e-22 108.6 138 53.6
Lj3g0001916 Lotus japonicus HOM05D004098 ORTHO05D005215 5.7e-14 81.6 134 41.0
Thecc.07G000300 Theobroma cacao HOM05D004098 ORTHO05D005215 1.3e-13 80.5 142 42.3
Duzib268G0918 Durio zibethinus HOM05D004098 ORTHO05D005215 6.3e-13 78.2 144 41.0
Manes.01G008000 Manihot esculenta HOM05D004098 ORTHO05D005215 8.2e-13 77.8 150 39.3
Glyma.06G320100 Glycine max HOM05D004098 ORTHO05D005215 1.4e-12 77.0 136 41.2
Potri.001G473100 Populus trichocarpa HOM05D004098 ORTHO05D005215 1.4e-12 77.0 147 38.8
Ciclev10007566m.g Citrus clementina HOM05D004098 ORTHO05D005215 3.1e-12 75.9 148 39.9
COL.COLO4_07798 Corchorus olitorius HOM05D004098 ORTHO05D005215 3.1e-12 75.9 145 40.7
Potri.011G170000 Populus trichocarpa HOM05D004098 ORTHO05D005215 3.1e-12 75.9 142 37.3
VMungo1080G0600 Vigna mungo HOM05D004098 ORTHO05D005215 4.1e-12 75.5 136 39.7
Glyma.04G116700 Glycine max HOM05D004098 ORTHO05D005215 9.1e-12 74.3 136 40.4
arahy.Tifrunner.gnm1.ann1.36GALV Arachis hypogaea HOM05D004098 ORTHO05D005215 1.2e-11 73.9 144 38.2
arahy.Tifrunner.gnm1.ann1.FI1VU9 Arachis hypogaea HOM05D004098 ORTHO05D005215 1.2e-11 73.9 144 38.2
Lalb_Chr15g0079811 Lupinus albus HOM05D004098 ORTHO05D005215 1.2e-11 73.9 143 39.2
Sed0000599 Sechium edule HOM05D004098 ORTHO05D005215 1.2e-11 73.9 146 40.4
Gohir.D05G388800 Gossypium hirsutum HOM05D004098 ORTHO05D005215 1.6e-11 73.6 146 39.7
Gorai.009G455400 Gossypium raimondii HOM05D004098 ORTHO05D005215 1.6e-11 73.6 146 39.7
Oeu052018.2 Olea europaea HOM05D004098 ORTHO05D005215 2.0e-11 73.2 141 39.7
Gohir.D05G388750 Gossypium hirsutum HOM05D004098 ORTHO05D005215 3.5e-11 72.4 146 39.7
Sopen10g001620 Solanum pennellii HOM05D004098 ORTHO05D005215 4.5e-11 72.0 142 40.1
Solyc10g005650.3 Solanum lycopersicum HOM05D004098 ORTHO05D005215 5.9e-11 71.6 142 40.1
Gohir.A04G000400 Gossypium hirsutum HOM05D004098 ORTHO05D005215 7.7e-11 71.2 146 39.0
MD11G1047800 Malus domestica HOM05D004098 ORTHO05D005215 1.0e-10 70.9 148 38.5
Manes.05G203450 Manihot esculenta HOM05D004098 ORTHO05D005215 1.0e-10 70.9 152 38.2
Psat5g230760 Pisum sativum HOM05D004098 ORTHO05D005215 1.7e-10 70.1 140 38.6
PGR083G2418 Punica granatum HOM05D004098 ORTHO05D005215 1.7e-10 70.1 141 41.1
Cc05_g15840 Coffea canephora HOM05D004098 ORTHO05D005215 2.2e-10 69.7 136 39.7
CsaV3_3G003580 Cucumis sativus L. HOM05D004098 ORTHO05D005215 2.2e-10 69.7 145 39.3
Prupe.6G036900 Prunus persica HOM05D004098 ORTHO05D005215 2.2e-10 69.7 144 38.9
TWI14G0432 Tripterygium wilfordii HOM05D004098 ORTHO05D005215 2.2e-10 69.7 142 40.8
TWI39G0299 Tripterygium wilfordii HOM05D004098 ORTHO05D005215 2.2e-10 69.7 142 40.8
MD03G1045600 Malus domestica HOM05D004098 ORTHO05D005215 2.9e-10 69.3 142 38.7
Nitab4.5_0000611g0190 Nicotiana tabacum HOM05D004098 ORTHO05D005215 2.9e-10 69.3 140 39.3
Phvul.005G006500 Phaseolus vulgaris HOM05D004098 ORTHO05D005215 2.9e-10 69.3 136 39.0
MELO3C014028.2 Cucumis melo HOM05D004098 ORTHO05D005215 3.8e-10 68.9 145 40.0
DCAR_016814 Daucus carota HOM05D004098 ORTHO05D005215 5.0e-10 68.6 142 40.1
PGSC0003DMG400011237 Solanum tuberosum HOM05D004098 ORTHO05D005215 5.0e-10 68.6 142 39.4
Actinidia35440 Actinidia chinensis HOM05D004098 ORTHO05D005215 6.5e-10 68.2 146 39.0
Sabra11G0137000 Salix brachista HOM05D004098 ORTHO05D005215 8.5e-10 67.8 174 31.6
CAN.G492.64 Capsicum annuum HOM05D004098 ORTHO05D005215 1.5e-09 67.0 133 42.1
ClCG00G000320 Citrullus lanatus HOM05D004098 ORTHO05D005215 1.5e-09 67.0 146 38.4
ClCG10G003580 Citrullus lanatus HOM05D004098 ORTHO05D005215 1.5e-09 67.0 146 38.4
Nn2g14376 Nelumbo nucifera HOM05D004098 ORTHO05D005215 1.5e-09 67.0 151 38.4
DCAR_019936 Daucus carota HOM05D004098 ORTHO05D005215 1.9e-09 66.6 133 39.1
Migut.M01572 Erythranthe guttata HOM05D004098 ORTHO05D005215 1.9e-09 66.6 139 38.8
Medtr3g009230 Medicago truncatula HOM05D004098 ORTHO05D005215 1.9e-09 66.6 140 37.1
MSTRG.16125 Avicennia marina HOM05D004098 ORTHO05D005215 2.5e-09 66.2 146 37.7
Peaxi162Scf00018g00064 Petunia axillaris HOM05D004098 ORTHO05D005215 2.5e-09 66.2 142 39.4
Dinv42526 Davidia involucrata HOM05D004098 ORTHO05D005215 3.2e-09 65.9 146 37.7
GSVIVG01014864001 Vitis vinifera HOM05D004098 ORTHO05D005215 7.2e-09 64.7 141 36.9
Ah.04g164850 Amaranthus hybridus HOM05D000499 ORTHO05D002036 9.4e-09 64.3 142 35.2
AUR62017765 Chenopodium quinoa HOM05D004098 ORTHO05D005215 9.4e-09 64.3 151 33.8
Eucgr.F01979 Eucalyptus grandis HOM05D004098 ORTHO05D005215 9.4e-09 64.3 139 38.8
TPR.G16705 Trifolium pratense HOM05D004098 ORTHO05D005215 9.4e-09 64.3 141 37.6
HanXRQChr05g0160701 Helianthus annuus HOM05D004098 ORTHO05D005215 1.2e-08 63.9 137 38.7
Ca_14121_v3 Cicer arietinum L. HOM05D004098 ORTHO05D005215 1.6e-08 63.5 143 37.1
Atru.chr2.3913 Acer truncatum HOM05D004098 ORTHO05D005215 2.7e-08 62.8 144 35.4
SalBow8G2465 Salvia bowleyana HOM05D004098 ORTHO05D005215 2.7e-08 62.8 146 38.4
EL10Ac4g07494 Beta vulgaris HOM05D004098 ORTHO05D005215 6.1e-08 61.6 142 36.6
AUR62043123 Chenopodium quinoa HOM05D004098 ORTHO05D005215 6.1e-08 61.6 151 32.5
Dinv19633 Davidia involucrata HOM05D004098 ORTHO05D005215 1.0e-07 60.8 144 36.1
ECA246G1615 Erigeron canadensis HOM05D004098 ORTHO05D005215 1.0e-07 60.8 127 40.9
TAR626G1397 Trochodendron aralioides HOM05D004098 ORTHO05D005215 1.0e-07 60.8 153 34.6
Lj8C185G3 Lonicera japonica HOM05D004098 ORTHO05D005215 1.8e-07 60.1 139 35.3
FAN16G0876 Fragaria x ananassa HOM05D004098 ORTHO05D005215 2.3e-07 59.7 143 38.5
FAN21G3119 Fragaria x ananassa HOM05D004098 ORTHO05D005215 2.3e-07 59.7 143 38.5
RcHm_v2.0_Chr5g0074241 Rosa chinensis HOM05D004098 ORTHO05D005215 4.0e-07 58.9 147 38.8
CiPaw.11G211200 Carya illinoinensis HOM05D004098 ORTHO05D005215 6.7e-07 58.2 146 30.8
FvH4_3g41350 Fragaria vesca HOM05D004098 ORTHO05D005215 6.7e-07 58.2 149 37.6
FAN11G1160 Fragaria x ananassa HOM05D004098 ORTHO05D005215 6.7e-07 58.2 149 37.6
Lsat_1_v5_gn_5_241 Lactuca sativa HOM05D004098 ORTHO05D005215 6.7e-07 58.2 137 40.1
Aqoxy4G02276 Aquilegia oxysepala HOM05D004098 ORTHO05D005215 8.8e-07 57.8 145 34.5
Sc03g0011840 Simmondsia chinensis HOM05D004098 ORTHO05D005215 1.2e-06 57.4 149 32.9
CANSAT11G1316 Cannabis sativa HOM05D004098 ORTHO05D005215 2.6e-06 56.2 154 34.4
Cfa016972 Carpinus fangiana HOM05D004098 ORTHO05D005215 2.6e-06 56.2 146 34.2
Haze_09929 Corylus avellana HOM05D004098 ORTHO05D005215 2.6e-06 56.2 146 34.2
MSTRG.7048 Avicennia marina HOM05D004098 ORTHO05D005215 4.4e-06 55.5 144 36.8
unitig_749.g13703 Utricularia gibba HOM05D004098 ORTHO05D005215 7.5e-06 54.7 126 32.5


User provided reference genes

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