Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p15370 Brassica napus HOM05D004098 ORTHO05D005215 9.9e-186 653.3 327 100.0
BolC2t07653H Brassica oleracea HOM05D004098 ORTHO05D005215 2.2e-177 625.5 388 84.3
BraA03t10663Z Brassica rapa HOM05D004098 ORTHO05D005215 5.7e-125 451.4 480 55.4
BolC3t14019H Brassica oleracea HOM05D004098 ORTHO05D005215 3.3e-104 382.5 480 49.4
BraA10t43460Z Brassica rapa HOM05D004098 ORTHO05D005215 6.0e-98 361.7 492 47.8
BcaB05g22257 Brassica carinata HOM05D004098 ORTHO05D005215 1.3e-97 360.5 485 50.1
BcaC04g20111 Brassica carinata HOM05D004098 ORTHO05D005215 1.7e-92 343.6 467 46.9
C03p15880 Brassica napus HOM05D004098 ORTHO05D005215 4.0e-86 322.4 477 44.4
Rhsim04G0006500 Rhododendron simsii HOM05D004098 ORTHO05D005215 2.0e-85 320.1 520 40.2
AL8G31920 Arabidopsis lyrata HOM05D004098 ORTHO05D005215 1.3e-84 317.4 476 45.0
CARHR269690 Cardamine hirsuta HOM05D004098 ORTHO05D005215 1.3e-84 317.4 477 44.0
BcaC01g06414 Brassica carinata HOM05D004098 ORTHO05D005215 4.6e-82 308.9 477 44.2
Nitab4.5_0000611g0190 Nicotiana tabacum HOM05D004098 ORTHO05D005215 3.0e-81 306.2 477 42.1
BcaB01g04390 Brassica carinata HOM05D004098 ORTHO05D005215 4.3e-80 302.4 477 43.8
DCAR_019936 Daucus carota HOM05D004098 ORTHO05D005215 2.1e-79 300.1 486 40.7
A03p13590 Brassica napus HOM05D004098 ORTHO05D005215 2.8e-79 299.7 477 43.6
Sp6g18140 Schrenkiella parvula HOM05D004098 ORTHO05D005215 3.6e-79 299.3 477 43.8
A10p13580 Brassica napus HOM05D004098 ORTHO05D005215 1.1e-78 297.7 477 43.0
Thhalv10012791m.g Eutrema salsugineum HOM05D004098 ORTHO05D005215 1.8e-78 297.0 477 44.0
AT5G56290 Arabidopsis thaliana HOM05D004098 ORTHO05D005215 9.0e-78 294.7 476 42.4
C09p47570 Brassica napus HOM05D004098 ORTHO05D005215 2.2e-76 290.0 477 42.1
BolC9t57610H Brassica oleracea HOM05D004098 ORTHO05D005215 6.4e-76 288.5 471 42.3
THA.LOC104813473 Tarenaya hassleriana HOM05D004098 ORTHO05D005215 9.3e-75 284.6 479 40.1
Carub.0008s1661 Capsella rubella HOM05D004098 ORTHO05D005215 5.8e-69 265.4 476 40.1
Actinidia35440 Actinidia chinensis HOM05D004098 ORTHO05D005215 1.7e-68 263.8 359 47.1
Nitab4.5_0004488g0010 Nicotiana tabacum HOM05D004098 ORTHO05D005215 3.9e-65 252.7 504 36.1
COL.COLO4_07798 Corchorus olitorius HOM05D004098 ORTHO05D005215 6.7e-65 251.9 481 37.0
Prupe.6G036900 Prunus persica HOM05D004098 ORTHO05D005215 1.1e-64 251.1 486 36.6
MD11G1047800 Malus domestica HOM05D004098 ORTHO05D005215 1.9e-64 250.4 484 36.0
SalBow8G2465 Salvia bowleyana HOM05D004098 ORTHO05D005215 3.3e-64 249.6 484 36.8
Peaxi162Scf00018g00064 Petunia axillaris HOM05D004098 ORTHO05D005215 1.6e-63 247.3 499 35.7
Aa31LG3G12200 Aethionema arabicum HOM05D004098 ORTHO05D005215 2.1e-63 246.9 479 39.9
MD03G1045600 Malus domestica HOM05D004098 ORTHO05D005215 6.2e-63 245.4 484 35.3
Manes.01G008000 Manihot esculenta HOM05D004098 ORTHO05D005215 6.2e-63 245.4 479 35.5
Potri.011G170000 Populus trichocarpa HOM05D004098 ORTHO05D005215 1.5e-61 240.7 486 35.6
DCAR_016814 Daucus carota HOM05D004098 ORTHO05D005215 5.8e-61 238.8 484 36.2
Oeu052018.2 Olea europaea HOM05D004098 ORTHO05D005215 2.9e-60 236.5 489 36.0
Duzib268G0918 Durio zibethinus HOM05D004098 ORTHO05D005215 5.0e-60 235.7 457 36.1
Lj8C185G3 Lonicera japonica HOM05D004098 ORTHO05D005215 6.5e-60 235.3 514 34.6
Glyma.06G320100 Glycine max HOM05D004098 ORTHO05D005215 1.4e-59 234.2 484 34.7
Sabra11G0137000 Salix brachista HOM05D004098 ORTHO05D005215 1.4e-59 234.2 504 35.3
Glyma.04G116700 Glycine max HOM05D004098 ORTHO05D005215 1.9e-59 233.8 485 35.1
Phvul.005G006500 Phaseolus vulgaris HOM05D004098 ORTHO05D005215 5.5e-59 232.3 480 34.2
TWI14G0432 Tripterygium wilfordii HOM05D004098 ORTHO05D005215 7.1e-59 231.9 485 35.5
TWI39G0299 Tripterygium wilfordii HOM05D004098 ORTHO05D005215 7.1e-59 231.9 485 35.5
FAN11G1160 Fragaria x ananassa HOM05D004098 ORTHO05D005215 9.3e-59 231.5 484 34.9
FvH4_3g41350 Fragaria vesca HOM05D004098 ORTHO05D005215 1.2e-58 231.1 484 34.9
TAR626G1397 Trochodendron aralioides HOM05D004098 ORTHO05D005215 1.6e-58 230.7 485 35.1
Ciclev10007566m.g Citrus clementina HOM05D004098 ORTHO05D005215 3.5e-58 229.6 484 35.5
FAN16G0876 Fragaria x ananassa HOM05D004098 ORTHO05D005215 4.6e-58 229.2 484 34.7
Lj3g0001916 Lotus japonicus HOM05D004098 ORTHO05D005215 6.1e-58 228.8 485 35.3
Thecc.07G000300 Theobroma cacao HOM05D004098 ORTHO05D005215 6.1e-58 228.8 433 36.7
VMungo1080G0600 Vigna mungo HOM05D004098 ORTHO05D005215 6.1e-58 228.8 483 33.7
FAN25G0546 Fragaria x ananassa HOM05D004098 ORTHO05D005215 1.3e-57 227.6 481 34.9
Manes.05G203450 Manihot esculenta HOM05D004098 ORTHO05D005215 1.3e-57 227.6 483 33.7
QL08p000136 Quercus lobata HOM05D004098 ORTHO05D005215 1.3e-57 227.6 484 34.7
Migut.M01572 Erythranthe guttata HOM05D004098 ORTHO05D005215 1.8e-57 227.3 485 35.5
Atru.chr2.3913 Acer truncatum HOM05D004098 ORTHO05D005215 2.3e-57 226.9 377 40.1
FAN21G3119 Fragaria x ananassa HOM05D004098 ORTHO05D005215 2.3e-57 226.9 484 34.5
CANSAT11G1316 Cannabis sativa HOM05D004098 ORTHO05D005215 3.0e-57 226.5 484 34.7
Actinidia37106 Actinidia chinensis HOM05D004098 ORTHO05D005215 3.9e-57 226.1 485 35.1
Dinv19633 Davidia involucrata HOM05D004098 ORTHO05D005215 1.5e-56 224.2 485 34.4
GSVIVG01014864001 Vitis vinifera HOM05D004098 ORTHO05D005215 1.9e-56 223.8 480 34.0
PGR083G2418 Punica granatum HOM05D004098 ORTHO05D005215 4.3e-56 222.6 482 34.4
Dinv42526 Davidia involucrata HOM05D004098 ORTHO05D005215 4.8e-55 219.2 332 41.3
Lsat_1_v5_gn_5_241 Lactuca sativa HOM05D004098 ORTHO05D005215 6.3e-55 218.8 484 34.3
Lalb_Chr15g0079811 Lupinus albus HOM05D004098 ORTHO05D005215 1.1e-54 218.0 484 34.5
RcHm_v2.0_Chr5g0074241 Rosa chinensis HOM05D004098 ORTHO05D005215 2.4e-54 216.9 486 34.4
PGSC0003DMG400011237 Solanum tuberosum HOM05D004098 ORTHO05D005215 2.4e-54 216.9 487 34.3
Solyc10g005650.3 Solanum lycopersicum HOM05D004098 ORTHO05D005215 6.9e-54 215.3 487 34.3
Sopen10g001620 Solanum pennellii HOM05D004098 ORTHO05D005215 6.9e-54 215.3 487 34.3
CiPaw.11G211200 Carya illinoinensis HOM05D004098 ORTHO05D005215 9.0e-54 214.9 485 33.8
Aqoxy4G02276 Aquilegia oxysepala HOM05D004098 ORTHO05D005215 1.2e-53 214.5 476 33.0
arahy.Tifrunner.gnm1.ann1.36GALV Arachis hypogaea HOM05D004098 ORTHO05D005215 1.2e-53 214.5 491 34.2
Cc05_g15840 Coffea canephora HOM05D004098 ORTHO05D005215 2.0e-53 213.8 485 34.0
Sc03g0011840 Simmondsia chinensis HOM05D004098 ORTHO05D005215 2.0e-53 213.8 485 33.4
Cfa016972 Carpinus fangiana HOM05D004098 ORTHO05D005215 2.6e-53 213.4 487 33.9
PSO541G4185 Papaver somniferum HOM05D004098 ORTHO05D005215 5.9e-53 212.2 487 33.1
Eucgr.F01979 Eucalyptus grandis HOM05D004098 ORTHO05D005215 7.7e-53 211.8 478 33.5
HanXRQChr05g0160701 Helianthus annuus HOM05D004098 ORTHO05D005215 2.2e-52 210.3 480 33.8
PSO675G3414 Papaver somniferum HOM05D004098 ORTHO05D005215 2.2e-52 210.3 487 32.9
Potri.001G473100 Populus trichocarpa HOM05D004098 ORTHO05D005215 2.9e-52 209.9 486 33.1
Hma1.2p1_0321F.1_g124440 Hydrangea macrophylla HOM05D004098 ORTHO05D005215 6.5e-52 208.8 484 33.5
ECA246G1615 Erigeron canadensis HOM05D004098 ORTHO05D005215 8.5e-52 208.4 484 33.9
arahy.Tifrunner.gnm1.ann1.FI1VU9 Arachis hypogaea HOM05D004098 ORTHO05D005215 2.5e-51 206.8 481 33.7
Hma1.2p1_0321F.1_g124430 Hydrangea macrophylla HOM05D004098 ORTHO05D005215 5.5e-51 205.7 490 33.3
Ca_14121_v3 Cicer arietinum L. HOM05D004098 ORTHO05D005215 6.1e-50 202.2 483 33.1
Gorai.009G455400 Gossypium raimondii HOM05D004098 ORTHO05D005215 7.9e-50 201.8 481 33.3
Gohir.A04G000400 Gossypium hirsutum HOM05D004098 ORTHO05D005215 1.0e-49 201.4 481 33.3
CSS0008075 Camellia sinensis var. sinensis HOM05D004098 ORTHO05D005215 2.3e-49 200.3 485 32.8
Gohir.D05G388750 Gossypium hirsutum HOM05D004098 ORTHO05D005215 2.3e-49 200.3 481 33.1
Gohir.D05G388800 Gossypium hirsutum HOM05D004098 ORTHO05D005215 2.3e-49 200.3 481 33.1
Lalb_Chr18g0048751 Lupinus albus HOM05D004098 ORTHO05D005215 3.0e-49 199.9 484 33.1
Medtr3g009230 Medicago truncatula HOM05D004098 ORTHO05D005215 1.5e-48 197.6 484 32.9
Psat5g230760 Pisum sativum HOM05D004098 ORTHO05D005215 2.5e-48 196.8 484 32.2
Nn2g14376 Nelumbo nucifera HOM05D004098 ORTHO05D005215 7.4e-48 195.3 485 33.2
unitig_749.g13703 Utricularia gibba HOM05D004098 ORTHO05D005215 9.7e-48 194.9 487 31.8
TPR.G16705 Trifolium pratense HOM05D004098 ORTHO05D005215 3.7e-47 193.0 373 37.3
CAN.G492.64 Capsicum annuum HOM05D004098 ORTHO05D005215 4.8e-47 192.6 432 33.6
AUR62043123 Chenopodium quinoa HOM05D004098 ORTHO05D005215 2.4e-46 190.3 486 31.9
MSTRG.16125 Avicennia marina HOM05D004098 ORTHO05D005215 5.3e-46 189.1 485 31.8
CBR_g45681 Chara braunii HOM05D004098 ORTHO05D005215 9.1e-46 188.3 352 37.5
SGA_v2.0_scaffold7G03562 Striga asiatica HOM05D004098 ORTHO05D005215 2.2e-44 183.7 538 30.7
MSTRG.7048 Avicennia marina HOM05D004098 ORTHO05D005215 1.1e-43 181.4 461 30.8
Ah.04g164860 Amaranthus hybridus HOM05D004098 ORTHO05D005215 6.1e-42 175.6 373 33.0
EL10Ac4g07494 Beta vulgaris HOM05D004098 ORTHO05D005215 1.5e-40 171.0 484 31.4
HPP92_017855 Vanilla planifolia HOM05D004098 ORTHO05D005215 3.1e-38 163.3 328 36.3
MELO3C014028.2 Cucumis melo HOM05D004098 ORTHO05D005215 7.0e-38 162.2 482 30.1
CsaV3_3G003580 Cucumis sativus L. HOM05D004098 ORTHO05D005215 2.0e-37 160.6 482 29.9
ClCG10G003580 Citrullus lanatus HOM05D004098 ORTHO05D005215 4.2e-35 152.9 334 33.5
AUR62017764 Chenopodium quinoa HOM05D004098 ORTHO05D005215 1.6e-34 151.0 389 31.1
Gohir.A07G135000 Gossypium hirsutum HOM05D004098 ORTHO05D005215 3.0e-33 146.7 83 86.7
CDE05G2641 Ceratophyllum demersum HOM05D004098 ORTHO05D005215 4.0e-33 146.4 364 32.1
ATR0751G081 Amborella trichopoda HOM05D004098 ORTHO05D005215 2.2e-31 140.6 314 32.8
Mapoly0064s0022 Marchantia polymorpha HOM05D004098 ORTHO05D005215 2.4e-30 137.1 484 26.9
ClCG00G000320 Citrullus lanatus HOM05D004098 ORTHO05D005215 3.5e-29 133.3 313 31.9
Os08g0500100 Oryza sativa ssp. japonica HOM05D004098 ORTHO05D005215 1.0e-28 131.7 270 35.2
Gohir.A11G000150 Gossypium hirsutum HOM05D005360 ORTHO05D026494 1.7e-28 131.0 82 79.3
vmacro09791 Vaccinium macrocarpon HOM05D004098 ORTHO05D005215 4.2e-27 126.3 227 37.4
vmacro09792 Vaccinium macrocarpon HOM05D004098 ORTHO05D005215 4.7e-26 122.9 185 41.1
Haze_09929 Corylus avellana HOM05D004098 ORTHO05D005215 8.0e-26 122.1 232 39.7
Gohir.A13G000950 Gossypium hirsutum HOM05D004098 ORTHO05D005215 8.0e-26 122.1 301 33.6
Gohir.1Z049490 Gossypium hirsutum HOM05D004098 ORTHO05D005215 2.0e-24 117.5 71 80.3
Gohir.A03G081400 Gossypium hirsutum HOM05D004098 ORTHO05D005215 1.7e-23 114.4 83 72.3
A02p09220 Brassica napus HOM05D004098 ORTHO05D005215 2.2e-23 114.0 59 93.2
Pp3c14_5170 Physcomitrium patens HOM05D004098 ORTHO05D005215 7.7e-21 105.5 496 24.8
Gohir.A04G000600 Gossypium hirsutum HOM05D004098 ORTHO05D005215 1.9e-19 100.9 170 38.2
SEGI_20896 Sequoiadendron giganteum HOM05D004098 ORTHO05D005215 1.6e-18 97.8 272 30.1
Sed0000599 Sechium edule HOM05D004098 ORTHO05D005215 4.7e-18 96.3 288 29.9
SMO361G0081 Selaginella moellendorffii HOM05D004098 ORTHO05D005215 6.8e-17 92.4 296 28.4
Gohir.A06G201500 Gossypium hirsutum HOM05D004098 ORTHO05D005215 2.8e-15 87.0 55 78.2
Zm00001eb199560 Zea mays HOM05D004098 ORTHO05D005215 5.4e-14 82.8 326 27.3
Haze_09931 Corylus avellana HOM05D000997 ORTHO05D000828 4.5e-13 79.7 131 36.6
Zm00001eb034080 Zea mays HOM05D004098 ORTHO05D005215 1.0e-12 78.6 326 27.0
Ah.15g100450 Amaranthus hybridus HOM05D035932 ORTHO05D026494 2.3e-12 77.4 59 64.4
Ah.15g100480 Amaranthus hybridus HOM05D035932 ORTHO05D026494 2.3e-12 77.4 59 64.4
Lsat_1_v5_gn_6_79681 Lactuca sativa HOM05D004098 ORTHO05D005215 1.1e-11 75.1 157 31.8
Gohir.A05G415601 Gossypium hirsutum HOM05D004098 ORTHO05D005215 1.5e-11 74.7 78 48.7
Cpa.g.sc12.51 Carica papaya HOM05D004098 ORTHO05D005215 3.3e-11 73.6 138 33.3
MCO05G026 Micromonas commoda HOM05D004098 ORTHO05D005215 4.2e-11 73.2 337 24.6
Gohir.A03G000002 Gossypium hirsutum HOM05D004098 ORTHO05D005215 2.8e-10 70.5 223 27.8
Gohir.1Z049406 Gossypium hirsutum HOM05D004098 ORTHO05D005215 6.1e-10 69.3 116 38.8
A02p09200 Brassica napus HOM05D061471 ORTHO05D041986 4.4e-08 63.2 32 90.6
BraA02t05987Z Brassica rapa HOM05D061471 ORTHO05D041986 4.4e-08 63.2 32 90.6
Hund01805 Selenicereus undatus HOM05D004098 ORTHO05D005215 4.4e-08 63.2 41 70.7
Gohir.1Z049608 Gossypium hirsutum HOM05D004098 ORTHO05D005215 1.3e-07 61.6 55 52.7
Cre14.g616750 Chlamydomonas reinhardtii HOM05D004098 ORTHO05D005215 2.2e-07 60.8 218 27.5
Gorai.009G455200 Gossypium raimondii HOM05D004098 ORTHO05D005215 2.4e-06 57.4 223 25.6
Cpa.g.sc12.49 Carica papaya HOM05D004098 ORTHO05D021823 3.2e-06 57.0 33 75.8


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