Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p14290 Brassica napus HOM05D007606 ORTHO05D009600 2.5e-62 242.7 203 100.0
BolC2t07555H Brassica oleracea HOM05D007606 ORTHO05D009600 4.3e-54 215.3 209 89.5
BcaC03g14159 Brassica carinata HOM05D007606 ORTHO05D009600 9.6e-54 214.2 209 89.5
BraA02t05924Z Brassica rapa HOM05D007606 ORTHO05D009600 1.1e-46 190.7 207 87.4
A02p08550 Brassica napus HOM05D007606 ORTHO05D009600 5.3e-44 181.8 208 80.8
Sp6g19090 Schrenkiella parvula HOM05D007606 ORTHO05D009600 4.2e-41 172.2 172 70.9
C09p49270 Brassica napus HOM05D007606 ORTHO05D009600 5.8e-35 151.8 153 74.5
BolC9t57778H Brassica oleracea HOM05D007606 ORTHO05D009600 5.8e-35 151.8 153 74.5
BcaC04g19971 Brassica carinata HOM05D007606 ORTHO05D009600 1.0e-34 151.0 155 73.5
Aa31LG3G13250 Aethionema arabicum HOM05D007606 ORTHO05D009600 1.9e-33 146.7 163 72.4
Carub.0008s1789 Capsella rubella HOM05D007606 ORTHO05D009600 4.6e-32 142.1 168 69.6
AT5G57370 Arabidopsis thaliana HOM05D007606 ORTHO05D009600 3.9e-31 139.0 112 73.2
BcaB05g22341 Brassica carinata HOM05D007606 ORTHO05D009600 5.1e-31 138.7 97 79.4
AL8G33350 Arabidopsis lyrata HOM05D007606 ORTHO05D009600 1.4e-28 130.6 103 71.8
MD13G1252200 Malus domestica HOM05D007606 ORTHO05D009600 1.4e-28 130.6 105 68.6
A10p14850 Brassica napus HOM05D007606 ORTHO05D009600 1.5e-27 127.1 62 100.0
BraA10t43563Z Brassica rapa HOM05D007606 ORTHO05D009600 1.5e-27 127.1 62 100.0
CARHR271170 Cardamine hirsuta HOM05D007606 ORTHO05D009600 2.0e-27 126.7 107 69.2
THA.LOC104813519 Tarenaya hassleriana HOM05D007606 ORTHO05D009600 1.3e-26 124.0 99 71.7
Sed0005573 Sechium edule HOM05D007606 ORTHO05D009600 2.9e-26 122.9 109 64.2
MELO3C017454.2 Cucumis melo HOM05D007606 ORTHO05D009600 3.8e-26 122.5 109 65.1
RcHm_v2.0_Chr4g0401721 Rosa chinensis HOM05D007606 ORTHO05D009600 5.0e-26 122.1 105 68.6
Cpa.g.sc523.4 Carica papaya HOM05D007606 ORTHO05D009600 2.5e-25 119.8 99 73.7
FvH4_4g07990 Fragaria vesca HOM05D007606 ORTHO05D009600 2.5e-25 119.8 105 63.8
Glyma.13G097200 Glycine max HOM05D007606 ORTHO05D009600 2.5e-25 119.8 105 70.5
Glyma.17G062400 Glycine max HOM05D007606 ORTHO05D009600 3.2e-25 119.4 105 62.9
CsaV3_1G031690 Cucumis sativus L. HOM05D007606 ORTHO05D009600 4.2e-25 119.0 161 63.4
FAN07G2281 Fragaria x ananassa HOM05D007606 ORTHO05D009600 7.2e-25 118.2 105 62.9
HanXRQChr12g0365451 Helianthus annuus HOM05D007606 ORTHO05D009600 9.3e-25 117.9 100 65.0
Lalb_Chr13g0300161 Lupinus albus HOM05D007606 ORTHO05D009600 9.3e-25 117.9 105 73.3
QL02p097943 Quercus lobata HOM05D007606 ORTHO05D009600 9.3e-25 117.9 107 71.0
Atru.chr7.594 Acer truncatum HOM05D007606 ORTHO05D009600 1.2e-24 117.5 101 70.3
CSS0005882 Camellia sinensis var. sinensis HOM05D007606 ORTHO05D009600 1.2e-24 117.5 63 88.9
MD16G1256400 Malus domestica HOM05D007606 ORTHO05D009600 1.2e-24 117.5 94 70.2
Prupe.1G084400 Prunus persica HOM05D007606 ORTHO05D009600 1.2e-24 117.5 95 68.4
CiPaw.07G193100 Carya illinoinensis HOM05D007606 ORTHO05D009600 2.1e-24 116.7 106 70.8
FAN17G2268 Fragaria x ananassa HOM05D007606 ORTHO05D009600 2.1e-24 116.7 105 69.5
CANSAT11G0497 Cannabis sativa HOM05D007606 ORTHO05D009600 2.7e-24 116.3 66 86.4
BcaB08g36096 Brassica carinata HOM05D007606 ORTHO05D009600 4.6e-24 115.5 66 90.9
Actinidia01312 Actinidia chinensis HOM05D007606 ORTHO05D009600 7.9e-24 114.8 106 63.2
Lsat_1_v5_gn_8_67821 Lactuca sativa HOM05D007606 ORTHO05D009600 7.9e-24 114.8 93 66.7
EL10Ac8g18293 Beta vulgaris HOM05D007606 ORTHO05D009600 1.0e-23 114.4 110 62.7
COL.COLO4_37736 Corchorus olitorius HOM05D007606 ORTHO05D009600 1.0e-23 114.4 95 74.7
Eucgr.C02351 Eucalyptus grandis HOM05D007606 ORTHO05D009600 1.0e-23 114.4 169 64.5
Sabra18G0078500 Salix brachista HOM05D007606 ORTHO05D009600 1.0e-23 114.4 106 66.0
Medtr4g127860 Medicago truncatula HOM05D007606 ORTHO05D009600 1.3e-23 114.0 99 70.7
Potri.018G091300 Populus trichocarpa HOM05D007606 ORTHO05D009600 2.3e-23 113.2 108 62.0
Sc18g0007510 Simmondsia chinensis HOM05D007606 ORTHO05D009600 2.3e-23 113.2 100 62.0
Os02g0461600 Oryza sativa ssp. japonica HOM05D007606 ORTHO05D009600 3.0e-23 112.8 63 84.1
Ciclev10009582m.g Citrus clementina HOM05D007606 ORTHO05D009600 3.9e-23 112.5 101 73.3
Hma1.2p1_1025F.1_g249400 Hydrangea macrophylla HOM05D007606 ORTHO05D009600 6.7e-23 111.7 66 86.4
TWI32G0742 Tripterygium wilfordii HOM05D007606 ORTHO05D009600 8.7e-23 111.3 102 62.7
Zm00001eb327770 Zea mays HOM05D007606 ORTHO05D009600 8.7e-23 111.3 64 85.9
Duzib168G1965 Durio zibethinus HOM05D007606 ORTHO05D009600 1.1e-22 110.9 95 74.7
Gohir.D08G193500 Gossypium hirsutum HOM05D007606 ORTHO05D009600 1.1e-22 110.9 101 69.3
Psat4g012880 Pisum sativum HOM05D007606 ORTHO05D009600 1.5e-22 110.5 67 82.1
TAR383G0717 Trochodendron aralioides HOM05D007606 ORTHO05D009600 1.9e-22 110.2 102 69.6
PSO063G2142 Papaver somniferum HOM05D007606 ORTHO05D009600 2.5e-22 109.8 105 60.0
Phvul.003G144300 Phaseolus vulgaris HOM05D007606 ORTHO05D009600 2.5e-22 109.8 104 68.3
Aqoxy7G03025 Aquilegia oxysepala HOM05D007606 ORTHO05D009600 4.3e-22 109.0 102 58.8
Manes.14G154600 Manihot esculenta HOM05D007606 ORTHO05D009600 4.3e-22 109.0 63 84.1
Thecc.09G175900 Theobroma cacao HOM05D007606 ORTHO05D009600 5.7e-22 108.6 94 73.4
Rhsim03G0264900 Rhododendron simsii HOM05D007606 ORTHO05D009600 7.4e-22 108.2 107 54.2
Ah.09g229950 Amaranthus hybridus HOM05D007606 ORTHO05D009600 1.6e-21 107.1 116 56.0
Gorai.004G203800 Gossypium raimondii HOM05D007606 ORTHO05D009600 2.2e-21 106.7 100 69.0
HPP92_010764 Vanilla planifolia HOM05D007606 ORTHO05D009600 2.2e-21 106.7 110 58.2
HanXRQChr08g0212621 Helianthus annuus HOM05D007606 ORTHO05D009600 2.8e-21 106.3 155 45.8
Lj5P601T23 Lonicera japonica HOM05D007606 ORTHO05D009600 2.8e-21 106.3 63 84.1
Cc06_g13140 Coffea canephora HOM05D007606 ORTHO05D009600 4.8e-21 105.5 65 81.5
GSVIVG01029223001 Vitis vinifera HOM05D007606 ORTHO05D009600 4.8e-21 105.5 63 81.0
Sopen07g006820 Solanum pennellii HOM05D007606 ORTHO05D009600 6.3e-21 105.1 110 61.8
Gohir.A08G174900 Gossypium hirsutum HOM05D007606 ORTHO05D009600 1.1e-20 104.4 104 66.3
Nn5g27171 Nelumbo nucifera HOM05D007606 ORTHO05D009600 1.4e-20 104.0 98 60.2
Hund26341 Selenicereus undatus HOM05D007606 ORTHO05D009600 1.4e-20 104.0 172 51.2
SGA_v2.0_scaffold66G22417 Striga asiatica HOM05D007606 ORTHO05D009600 3.1e-20 102.8 66 77.3
SHI02893 Sapria himalayana HOM05D007606 ORTHO05D009600 5.3e-20 102.1 62 77.4
PGSC0003DMG400004088 Solanum tuberosum HOM05D007606 ORTHO05D009600 6.9e-20 101.7 108 59.3
Ca_21234_v3 Cicer arietinum L. HOM05D007606 ORTHO05D009600 9.0e-20 101.3 53 90.6
Oeu025687.1 Olea europaea HOM05D007606 ORTHO05D009600 9.0e-20 101.3 63 79.4
SEGI_36552 Sequoiadendron giganteum HOM05D007606 ORTHO05D009600 1.5e-19 100.5 59 81.4
MSTRG.6226 Avicennia marina HOM05D007606 ORTHO05D009600 2.0e-19 100.1 63 76.2
AUR62021308 Chenopodium quinoa HOM05D007606 ORTHO05D009600 4.5e-19 99.0 55 85.5
CAN.G321.18 Capsicum annuum HOM05D007606 ORTHO05D009600 7.7e-19 98.2 98 60.2
PSO339G0750 Papaver somniferum HOM05D007606 ORTHO05D009600 1.0e-18 97.8 106 55.7
Migut.J01493 Erythranthe guttata HOM05D007606 ORTHO05D009600 3.8e-18 95.9 101 54.5
Nitab4.5_0000055g0310 Nicotiana tabacum HOM05D007606 ORTHO05D009600 3.8e-18 95.9 94 68.1
FAN12G2299 Fragaria x ananassa HOM05D007606 ORTHO05D009600 4.2e-17 92.4 91 58.2
CBR_g51476 Chara braunii HOM05D007606 ORTHO05D009600 7.2e-17 91.7 66 68.2
arahy.Tifrunner.gnm1.ann1.TB3R4X Arachis hypogaea HOM05D007606 ORTHO05D009600 2.1e-16 90.1 83 62.7
FAN22G0657 Fragaria x ananassa HOM05D007606 ORTHO05D009600 2.7e-16 89.7 91 56.0
AagrBONN_evm.TU.Sc2ySwM_362.441 Anthoceros agrestis HOM05D007606 ORTHO05D009600 1.4e-15 87.4 60 70.0
Mapoly0026s0023 Marchantia polymorpha HOM05D007606 ORTHO05D009600 1.4e-15 87.4 63 66.7
Pp3c7_10050 Physcomitrium patens HOM05D007606 ORTHO05D009600 1.8e-15 87.0 63 69.8
SMO358G0723 Selaginella moellendorffii HOM05D007606 ORTHO05D009600 3.7e-13 79.3 107 47.7
Cre10.g465950 Chlamydomonas reinhardtii HOM05D007606 ORTHO05D009600 4.2e-09 65.9 107 38.3


User provided reference genes

Program Settings