Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p04930 Brassica napus HOM05D002282 ORTHO05D002403 1.6e-101 372.9 204 100.0
BolC2t06451H Brassica oleracea HOM05D002282 ORTHO05D002403 1.6e-101 372.9 204 100.0
BcaC03g13360 Brassica carinata HOM05D002282 ORTHO05D032502 1.0e-39 167.5 146 75.3
BcaNung01920 Brassica carinata HOM05D002282 ORTHO05D002403 5.3e-36 155.2 90 87.8
BraA02t05075Z Brassica rapa HOM05D002282 ORTHO05D002403 2.0e-35 153.3 90 86.7
A02p00910 Brassica napus HOM05D002282 ORTHO05D002403 2.6e-35 152.9 90 86.7
AL6G21870 Arabidopsis lyrata HOM05D002282 ORTHO05D002403 1.3e-34 150.6 90 84.4
AT5G11240 Arabidopsis thaliana HOM05D002282 ORTHO05D002403 1.3e-34 150.6 90 84.4
BcaB08g37077 Brassica carinata HOM05D002282 ORTHO05D002403 1.3e-34 150.6 90 84.4
BcaC04g19248 Brassica carinata HOM05D002282 ORTHO05D002403 1.3e-34 150.6 90 84.4
A10p26480 Brassica napus HOM05D002282 ORTHO05D002403 1.3e-34 150.6 90 84.4
C09p65630 Brassica napus HOM05D002282 ORTHO05D002403 1.3e-34 150.6 90 84.4
BolC9t59386H Brassica oleracea HOM05D002282 ORTHO05D002403 1.3e-34 150.6 90 84.4
BraA10t44705Z Brassica rapa HOM05D002282 ORTHO05D002403 1.3e-34 150.6 90 84.4
Carub.0006s0971 Capsella rubella HOM05D002282 ORTHO05D002403 1.7e-34 150.2 90 84.4
Thhalv10012983m.g Eutrema salsugineum HOM05D002282 ORTHO05D002403 2.2e-34 149.8 90 83.3
Sp6g32320 Schrenkiella parvula HOM05D002282 ORTHO05D002403 2.2e-34 149.8 75 96.0
Aa31LG3G15950 Aethionema arabicum HOM05D002282 ORTHO05D002403 1.2e-32 144.1 75 93.3
CARHR202100 Cardamine hirsuta HOM05D002282 ORTHO05D002403 1.0e-31 141.0 90 78.9
THA.LOC104805829 Tarenaya hassleriana HOM05D002282 ORTHO05D002403 4.8e-29 132.1 90 71.1
Cfa006257 Carpinus fangiana HOM05D002282 ORTHO05D004557 2.4e-28 129.8 90 67.8
MBI19_g05149_MAGBIO Magnolia biondii HOM05D002282 ORTHO05D002403 4.1e-28 129.0 88 68.2
CiPaw.01G144200 Carya illinoinensis HOM05D002282 ORTHO05D002403 9.1e-28 127.9 90 67.8
QL06p010943 Quercus lobata HOM05D002282 ORTHO05D002403 1.5e-27 127.1 90 66.7
arahy.Tifrunner.gnm1.ann1.C0TKG5 Arachis hypogaea HOM05D002282 ORTHO05D002403 2.0e-27 126.7 90 67.8
arahy.Tifrunner.gnm1.ann1.3PI56D Arachis hypogaea HOM05D002282 ORTHO05D002403 2.6e-27 126.3 90 67.8
Hund11944 Selenicereus undatus HOM05D002282 ORTHO05D002403 2.6e-27 126.3 75 76.0
Cfa015451 Carpinus fangiana HOM05D002282 ORTHO05D002403 3.4e-27 125.9 90 65.6
Haze_01140 Corylus avellana HOM05D002282 ORTHO05D002403 3.4e-27 125.9 90 65.6
AUR62016160 Chenopodium quinoa HOM05D002282 ORTHO05D002403 4.5e-27 125.6 75 73.3
Ciclev10004544m.g Citrus clementina HOM05D002282 ORTHO05D002403 1.0e-26 124.4 90 65.6
Lj4g0005439 Lotus japonicus HOM05D002282 ORTHO05D002403 1.0e-26 124.4 90 68.9
Lj4g0022588 Lotus japonicus HOM05D002282 ORTHO05D002403 1.0e-26 124.4 90 68.9
AUR62035074 Chenopodium quinoa HOM05D002282 ORTHO05D002403 1.3e-26 124.0 75 72.0
AUR62044456 Chenopodium quinoa HOM05D002282 ORTHO05D002403 1.3e-26 124.0 75 72.0
COL.COLO4_03675 Corchorus olitorius HOM05D002282 ORTHO05D002403 1.7e-26 123.6 87 65.5
Haze_04567 Corylus avellana HOM05D002282 ORTHO05D002403 1.7e-26 123.6 90 64.4
DCAR_027041 Daucus carota HOM05D002282 ORTHO05D002403 1.7e-26 123.6 90 64.4
Cpa.g.sc9.113 Carica papaya HOM05D002282 ORTHO05D002403 2.9e-26 122.9 90 66.7
Lsat_1_v5_gn_6_76141 Lactuca sativa HOM05D002282 ORTHO05D002403 2.9e-26 122.9 103 52.4
PSO407G0173 Papaver somniferum HOM05D002282 ORTHO05D002403 2.9e-26 122.9 78 71.8
CANSAT35G1122 Cannabis sativa HOM05D002282 ORTHO05D002403 3.8e-26 122.5 90 63.3
Ah.04g155130 Amaranthus hybridus HOM05D002282 ORTHO05D002403 5.0e-26 122.1 75 70.7
PSO170G5250 Papaver somniferum HOM05D002282 ORTHO05D002403 5.0e-26 122.1 78 70.5
TAR365G0623 Trochodendron aralioides HOM05D002282 ORTHO05D002403 6.5e-26 121.7 90 64.4
ClCG06G004860 Citrullus lanatus HOM05D002282 ORTHO05D002403 8.5e-26 121.3 75 73.3
Potri.010G005400 Populus trichocarpa HOM05D002282 ORTHO05D002403 8.5e-26 121.3 90 63.3
Lalb_Chr12g0201081 Lupinus albus HOM05D002282 ORTHO05D002403 1.1e-25 120.9 87 65.5
EL10Ac3g04935 Beta vulgaris HOM05D002282 ORTHO05D002403 1.4e-25 120.6 75 70.7
Glyma.17G029800 Glycine max HOM05D002282 ORTHO05D002403 1.4e-25 120.6 90 65.6
Peaxi162Scf00065g01016 Petunia axillaris HOM05D002282 ORTHO05D002403 1.4e-25 120.6 75 74.7
ECA240G0914 Erigeron canadensis HOM05D002282 ORTHO05D002403 1.9e-25 120.2 90 61.1
Nn8g40612 Nelumbo nucifera HOM05D002282 ORTHO05D002403 1.9e-25 120.2 75 73.3
Prupe.1G129200 Prunus persica HOM05D002282 ORTHO05D002403 3.2e-25 119.4 75 72.0
Sed0017061 Sechium edule HOM05D002282 ORTHO05D002403 3.2e-25 119.4 75 72.0
Thecc.04G291300 Theobroma cacao HOM05D002282 ORTHO05D002403 3.2e-25 119.4 84 63.1
Manes.15G008900 Manihot esculenta HOM05D002282 ORTHO05D002403 4.2e-25 119.0 90 61.1
Aqoxy7G01538 Aquilegia oxysepala HOM05D002282 ORTHO05D002403 5.5e-25 118.6 83 67.5
Duzib052G0572 Durio zibethinus HOM05D002282 ORTHO05D002403 5.5e-25 118.6 75 70.7
Sabra10G0004600 Salix brachista HOM05D002282 ORTHO05D002403 5.5e-25 118.6 90 63.3
VMungo1215G3370 Vigna mungo HOM05D002282 ORTHO05D002403 5.5e-25 118.6 90 64.4
Glyma.07G244100 Glycine max HOM05D002282 ORTHO05D002403 7.2e-25 118.2 90 64.4
TWI09G1448 Tripterygium wilfordii HOM05D002282 ORTHO05D002403 7.2e-25 118.2 90 61.1
Cc03_g01330 Coffea canephora HOM05D002282 ORTHO05D002403 9.4e-25 117.9 90 63.3
Dinv29708 Davidia involucrata HOM05D002282 ORTHO05D002403 9.4e-25 117.9 90 61.1
GSVIVG01035079001 Vitis vinifera HOM05D002282 ORTHO05D002403 1.2e-24 117.5 90 62.2
Gohir.A09G063800 Gossypium hirsutum HOM05D002282 ORTHO05D002403 1.6e-24 117.1 75 66.7
Gohir.D09G062700 Gossypium hirsutum HOM05D002282 ORTHO05D002403 1.6e-24 117.1 75 66.7
Gorai.006G077500 Gossypium raimondii HOM05D002282 ORTHO05D002403 1.6e-24 117.1 75 66.7
Phvul.003G108800 Phaseolus vulgaris HOM05D002282 ORTHO05D002403 1.6e-24 117.1 90 64.4
PGR031G2323 Punica granatum HOM05D002282 ORTHO05D002403 1.6e-24 117.1 90 60.0
Glyma.10G110200 Glycine max HOM05D002282 ORTHO05D002403 2.1e-24 116.7 90 63.3
MD13G1161900 Malus domestica HOM05D002282 ORTHO05D002403 2.7e-24 116.3 75 70.7
Sopen02g009400 Solanum pennellii HOM05D002282 ORTHO05D002403 2.7e-24 116.3 75 72.0
PGSC0003DMG400011805 Solanum tuberosum HOM05D002282 ORTHO05D002403 2.7e-24 116.3 75 72.0
HanXRQChr03g0084951 Helianthus annuus HOM05D002282 ORTHO05D002403 3.6e-24 115.9 75 65.3
Sc19g0003390 Simmondsia chinensis HOM05D002282 ORTHO05D002403 4.7e-24 115.5 75 70.7
CSS0020497 Camellia sinensis var. sinensis HOM05D002282 ORTHO05D002403 6.1e-24 115.2 90 58.9
MD16G1161700 Malus domestica HOM05D002282 ORTHO05D002403 7.9e-24 114.8 75 68.0
Psat4g024880 Pisum sativum HOM05D002282 ORTHO05D002403 1.0e-23 114.4 84 63.1
Solyc02g030080.4 Solanum lycopersicum HOM05D002282 ORTHO05D002403 1.0e-23 114.4 75 70.7
TPR.G4827 Trifolium pratense HOM05D002282 ORTHO05D002403 1.8e-23 113.6 87 62.1
Eucgr.A01301 Eucalyptus grandis HOM05D002282 ORTHO05D002403 2.3e-23 113.2 85 62.4
Lj5A688G9 Lonicera japonica HOM05D002282 ORTHO05D002403 2.3e-23 113.2 89 58.4
FvH4_6g31810 Fragaria vesca HOM05D002282 ORTHO05D002403 5.2e-23 112.1 75 69.3
FAN02G0515 Fragaria x ananassa HOM05D002282 ORTHO05D002403 5.2e-23 112.1 75 69.3
FAN09G1184 Fragaria x ananassa HOM05D002282 ORTHO05D002403 5.2e-23 112.1 75 69.3
FAN14G3556 Fragaria x ananassa HOM05D002282 ORTHO05D002403 5.2e-23 112.1 75 69.3
RcHm_v2.0_Chr4g0423831 Rosa chinensis HOM05D002282 ORTHO05D002403 5.2e-23 112.1 75 69.3
SGA_v2.0_scaffold146G36232 Striga asiatica HOM05D002282 ORTHO05D002403 5.2e-23 112.1 75 65.3
Migut.G00119 Erythranthe guttata HOM05D002282 ORTHO05D002403 8.8e-23 111.3 90 62.2
CAN.G306.6 Capsicum annuum HOM05D002282 ORTHO05D002403 1.1e-22 110.9 75 66.7
FAN05G0042 Fragaria x ananassa HOM05D002282 ORTHO05D002403 1.1e-22 110.9 75 69.3
Actinidia02885 Actinidia chinensis HOM05D002282 ORTHO05D002403 2.0e-22 110.2 75 62.7
Lj3A826G75 Lonicera japonica HOM05D002282 ORTHO05D002403 2.0e-22 110.2 89 57.3
vmacro13795 Vaccinium macrocarpon HOM05D002282 ORTHO05D002403 2.0e-22 110.2 94 56.4
Oeu006431.1 Olea europaea HOM05D002282 ORTHO05D002403 2.6e-22 109.8 76 67.1
vmacro02293 Vaccinium macrocarpon HOM05D002282 ORTHO05D002403 2.6e-22 109.8 90 58.9
Atru.chr4.2932 Acer truncatum HOM05D002282 ORTHO05D002403 4.4e-22 109.0 66 72.7
MSTRG.10121 Avicennia marina HOM05D002282 ORTHO05D002403 5.7e-22 108.6 75 65.3
Ca_21469_v3 Cicer arietinum L. HOM05D002282 ORTHO05D002403 5.7e-22 108.6 84 59.5
Actinidia13378 Actinidia chinensis HOM05D002282 ORTHO05D002403 9.7e-22 107.8 90 55.6
ATR0693G215 Amborella trichopoda HOM05D002282 ORTHO05D002403 1.3e-21 107.5 76 60.5
CsaV3_6G022650 Cucumis sativus L. HOM05D002282 ORTHO05D002403 1.3e-21 107.5 68 70.6
Os03g0300300 Oryza sativa ssp. japonica HOM05D002282 ORTHO05D002403 1.3e-21 107.5 84 57.1
MELO3C021295.2 Cucumis melo HOM05D002282 ORTHO05D002403 2.2e-21 106.7 68 69.1
Nitab4.5_0000378g0050 Nicotiana tabacum HOM05D002282 ORTHO05D002403 2.2e-21 106.7 70 68.6
Nitab4.5_0001298g0020 Nicotiana tabacum HOM05D002282 ORTHO05D002403 2.2e-21 106.7 70 68.6
Nitab4.5_0004432g0020 Nicotiana tabacum HOM05D002282 ORTHO05D002403 2.2e-21 106.7 70 68.6
Medtr4g120740 Medicago truncatula HOM05D002282 ORTHO05D002403 3.7e-21 105.9 73 65.8
HPP92_021476 Vanilla planifolia HOM05D002282 ORTHO05D002403 4.8e-21 105.5 75 62.7
Zm00001eb013980 Zea mays HOM05D002282 ORTHO05D002403 1.8e-20 103.6 84 56.0
SEGI_26113 Sequoiadendron giganteum HOM05D002282 ORTHO05D002403 2.4e-20 103.2 86 54.7
CDE11G1255 Ceratophyllum demersum HOM05D002282 ORTHO05D002403 6.5e-18 95.1 85 52.9
Rhsim02G0006600 Rhododendron simsii HOM05D002282 ORTHO05D002403 1.2e-16 90.9 91 51.6
Mapoly0078s0006 Marchantia polymorpha HOM05D002282 ORTHO05D002403 2.1e-16 90.1 75 52.0
ATR0580G098 Amborella trichopoda HOM05D002282 ORTHO05D002403 2.7e-16 89.7 82 51.2
AagrBONN_evm.TU.Sc2ySwM_362.229 Anthoceros agrestis HOM05D002282 ORTHO05D002403 6.1e-16 88.6 85 49.4
CDE05G3405 Ceratophyllum demersum HOM05D002282 ORTHO05D002403 6.1e-16 88.6 77 53.2
CARHR202090 Cardamine hirsuta HOM05D002282 ORTHO05D002403 1.8e-15 87.0 87 72.4
CBR_g57080 Chara braunii HOM05D002282 ORTHO05D002403 5.7e-14 82.0 75 48.0
Lj5A68G60 Lonicera japonica HOM05D002282 ORTHO05D002403 6.3e-13 78.6 100 39.0
Actinidia14272 Actinidia chinensis HOM05D002282 ORTHO05D002403 8.2e-13 78.2 73 47.9
Pp3c7_70 Physcomitrium patens HOM05D002282 ORTHO05D002403 3.1e-12 76.3 73 45.2
MELO3C023398.2 Cucumis melo HOM05D002282 ORTHO05D002403 7.0e-12 75.1 83 41.0
MBI04_g10418_MAGBIO Magnolia biondii HOM05D002282 ORTHO05D002403 7.0e-12 75.1 75 46.7
CsaV3_7G032650 Cucumis sativus L. HOM05D002282 ORTHO05D002403 1.2e-11 74.3 84 40.5
Nn2g11949 Nelumbo nucifera HOM05D002282 ORTHO05D002403 1.6e-11 73.9 75 44.0
SMO361G0163 Selaginella moellendorffii HOM05D002282 ORTHO05D002403 1.6e-11 73.9 75 42.7
Atru.chr1.3116 Acer truncatum HOM05D002282 ORTHO05D002403 4.5e-11 72.4 84 36.9
CDE07G0270 Ceratophyllum demersum HOM05D002282 ORTHO05D002403 4.5e-11 72.4 100 35.0
Ciclev10025131m.g Citrus clementina HOM05D002282 ORTHO05D002403 5.9e-11 72.0 103 37.9
ClCG09G002680 Citrullus lanatus HOM05D002282 ORTHO05D002403 7.7e-11 71.6 84 39.3
Sed0027048 Sechium edule HOM05D002282 ORTHO05D002403 1.3e-10 70.9 84 39.3
Manes.04G116700 Manihot esculenta HOM05D002282 ORTHO05D002403 1.7e-10 70.5 84 39.3
Dinv30569 Davidia involucrata HOM05D002282 ORTHO05D002403 5.0e-10 68.9 97 33.0
Sed0003011 Sechium edule HOM05D002282 ORTHO05D002403 5.0e-10 68.9 75 40.0
PRCOL_00005222 Prasinoderma coloniale HOM05D002282 ORTHO05D002403 6.5e-10 68.6 77 37.7
COL.COLO4_12890 Corchorus olitorius HOM05D002282 ORTHO05D002403 4.2e-09 65.9 104 34.6
BraA02t05947Z Brassica rapa HOM05D002282 ORTHO05D032502 1.2e-08 64.3 71 67.6
Actinidia01770 Actinidia chinensis HOM05D002282 ORTHO05D002403 1.6e-08 63.9 103 34.0
CANSAT56G4088 Cannabis sativa HOM05D002282 ORTHO05D002403 2.7e-08 63.2 106 34.0
GSVIVG01017246001 Vitis vinifera HOM05D002282 ORTHO05D002403 4.7e-08 62.4 75 38.7
Nn3g21580 Nelumbo nucifera HOM05D002282 ORTHO05D002403 6.1e-08 62.0 48 56.2
TPR.G38626 Trifolium pratense HOM05D002282 ORTHO05D002403 6.1e-08 62.0 75 40.0
Lj3g0004862 Lotus japonicus HOM05D002282 ORTHO05D002403 1.4e-07 60.8 82 39.0
DCAR_025482 Daucus carota HOM05D002282 ORTHO05D002403 1.8e-07 60.5 111 31.5
Gorai.009G129900 Gossypium raimondii HOM05D002282 ORTHO05D002403 3.0e-07 59.7 85 32.9
Medtr4g011300 Medicago truncatula HOM05D002282 ORTHO05D002403 3.0e-07 59.7 75 40.0
Psat7g255200 Pisum sativum HOM05D002282 ORTHO05D002403 3.0e-07 59.7 75 38.7
CAN.G407.112 Capsicum annuum HOM05D002282 ORTHO05D002403 4.0e-07 59.3 100 30.0
Gohir.D05G125900 Gossypium hirsutum HOM05D002282 ORTHO05D002403 6.8e-07 58.5 82 32.9
Peaxi162Scf00274g00850 Petunia axillaris HOM05D002282 ORTHO05D002403 1.5e-06 57.4 100 30.0
Cc04_g04050 Coffea canephora HOM05D002282 ORTHO05D002403 2.6e-06 56.6 103 29.1
Lsat_1_v5_gn_1_33521 Lactuca sativa HOM05D002282 ORTHO05D002403 2.6e-06 56.6 109 28.4
Lalb_Chr04g0262501 Lupinus albus HOM05D002282 ORTHO05D002403 2.6e-06 56.6 75 38.7
Rhsim08G0216500 Rhododendron simsii HOM05D002282 ORTHO05D002403 3.4e-06 56.2 88 30.7
Gohir.A05G124900 Gossypium hirsutum HOM05D002282 ORTHO05D002403 5.7e-06 55.5 75 32.0
Haze_01137 Corylus avellana HOM05D002282 ORTHO05D002403 7.5e-06 55.1 78 57.7
THA.LOC104812495 Tarenaya hassleriana HOM05D002282 ORTHO05D002403 9.8e-06 54.7 116 29.3


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