Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p04270 Brassica napus HOM05D030809 ORTHO05D024311 1.2e-74 283.1 145 100.0
BolC2t06391H Brassica oleracea HOM05D030809 ORTHO05D024311 8.4e-44 180.6 89 100.0
BcaC03g13296 Brassica carinata HOM05D005566 ORTHO05D024311 3.0e-25 119.0 63 98.4
BcaC03g13295 Brassica carinata HOM05D030809 ORTHO05D024311 2.0e-21 106.3 58 96.6
BolC2t06390H Brassica oleracea HOM05D030809 ORTHO05D024311 2.0e-21 106.3 58 96.6
Thhalv10006889m.g Eutrema salsugineum HOM05D005566 ORTHO05D007534 5.8e-21 104.8 139 48.9
BcaC05g25112 Brassica carinata HOM05D005566 ORTHO05D007534 2.5e-19 99.4 139 45.3
Carub.0001s1252 Capsella rubella HOM05D005566 ORTHO05D007534 5.5e-19 98.2 115 52.2
CARHR013110 Cardamine hirsuta HOM05D005566 ORTHO05D007534 7.1e-19 97.8 137 45.3
BcaC05g25155 Brassica carinata HOM05D005566 ORTHO05D007534 9.3e-19 97.4 105 52.4
A06p08880 Brassica napus HOM05D005566 ORTHO05D007534 1.2e-18 97.1 76 67.1
BraA06t24082Z Brassica rapa HOM05D005566 ORTHO05D007534 1.2e-18 97.1 76 67.1
Sp1g11360 Schrenkiella parvula HOM05D005566 ORTHO05D007534 4.6e-18 95.1 76 64.5
AL1G24290 Arabidopsis lyrata HOM05D005566 ORTHO05D007534 6.0e-18 94.7 76 65.8
AL1G24430 Arabidopsis lyrata HOM05D005566 ORTHO05D007534 1.8e-17 93.2 76 64.5
AT1G12800 Arabidopsis thaliana HOM05D005566 ORTHO05D007534 8.7e-17 90.9 76 63.2
C05p10500 Brassica napus HOM05D005566 ORTHO05D007534 1.1e-14 84.0 105 47.6
BolC5t29796H Brassica oleracea HOM05D005566 ORTHO05D007534 1.1e-14 84.0 105 47.6
C05p39560 Brassica napus HOM05D005566 ORTHO05D031888 4.1e-14 82.0 44 88.6
BcaC05g27952 Brassica carinata HOM05D005566 ORTHO05D031888 2.6e-13 79.3 47 83.0
Aa31LG1G1950 Aethionema arabicum HOM05D005566 ORTHO05D007534 7.7e-13 77.8 105 44.8
THA.LOC104809401 Tarenaya hassleriana HOM05D005566 ORTHO05D007534 2.9e-12 75.9 76 53.9
THA.LOC104809657 Tarenaya hassleriana HOM05D005566 ORTHO05D007534 1.9e-11 73.2 76 52.6


User provided reference genes

Program Settings