Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p51170 Brassica napus HOM05D000822 ORTHO05D016049 4.3e-24 113.6 50 100.0
BolC1t05077H Brassica oleracea HOM05D000822 ORTHO05D016049 1.5e-13 78.6 36 97.2
BcaC09g48342 Brassica carinata HOM05D000822 ORTHO05D016049 7.9e-10 66.2 29 100.0
BcaC09g48344 Brassica carinata HOM05D000822 ORTHO05D016815 7.9e-10 66.2 38 73.7
BcaC09g48349 Brassica carinata HOM05D000822 ORTHO05D014097 3.0e-09 64.3 36 77.8
C01p51080 Brassica napus HOM05D000822 ORTHO05D002021 3.0e-09 64.3 36 77.8
BolC1t05071H Brassica oleracea HOM05D000822 ORTHO05D016815 3.0e-09 64.3 36 77.8
C01p51120 Brassica napus HOM05D000822 ORTHO05D019965 3.9e-09 63.9 36 75.0
BolC1t05085H Brassica oleracea HOM05D000822 ORTHO05D016815 3.9e-09 63.9 36 75.0
BolC1t05093H Brassica oleracea HOM05D000822 ORTHO05D016815 3.9e-09 63.9 36 75.0
BolC1t05069H Brassica oleracea HOM05D000822 ORTHO05D016815 5.1e-09 63.5 36 77.8
BcaC09g48328 Brassica carinata HOM05D000822 ORTHO05D014097 6.7e-09 63.2 36 75.0
BolC1t05095H Brassica oleracea HOM05D000822 ORTHO05D016049 6.7e-09 63.2 34 79.4
BcaC09g48320 Brassica carinata HOM05D000822 ORTHO05D002021 1.5e-08 62.0 36 72.2
C01p51450 Brassica napus HOM05D000822 ORTHO05D019965 1.5e-08 62.0 36 72.2
C01p51400 Brassica napus HOM05D000822 ORTHO05D014097 3.3e-08 60.8 38 68.4
Sed0009745 Sechium edule HOM05D000822 ORTHO05D002021 7.4e-08 59.7 46 58.7
Sed0015093 Sechium edule HOM05D000822 ORTHO05D002021 7.4e-08 59.7 46 58.7
BcaB02g06549 Brassica carinata HOM05D000822 ORTHO05D002021 1.3e-07 58.9 36 69.4
SalBow2G2887 Salvia bowleyana HOM05D000822 ORTHO05D002021 3.7e-07 57.4 36 63.9
SalBow2G0390 Salvia bowleyana HOM05D000822 ORTHO05D002021 4.8e-07 57.0 36 63.9
SalBow2G2047 Salvia bowleyana HOM05D000822 ORTHO05D002021 4.8e-07 57.0 36 63.9
SalBow2G3446 Salvia bowleyana HOM05D000822 ORTHO05D002021 4.8e-07 57.0 36 63.9
THA.LOC104805089 Tarenaya hassleriana HOM05D000822 ORTHO05D002021 4.8e-07 57.0 36 66.7
TWI53G2103 Tripterygium wilfordii HOM05D000822 ORTHO05D002021 4.8e-07 57.0 36 66.7
CANSAT78G2101 Cannabis sativa HOM05D000822 ORTHO05D002021 6.3e-07 56.6 36 63.9
ClCG01G006600 Citrullus lanatus HOM05D000822 ORTHO05D002021 6.3e-07 56.6 46 56.5
CsaV3_5G027970 Cucumis sativus L. HOM05D000822 ORTHO05D002021 6.3e-07 56.6 46 56.5
CsaV3_5G028230 Cucumis sativus L. HOM05D000822 ORTHO05D002021 6.3e-07 56.6 46 56.5
CANSAT78G0909 Cannabis sativa HOM05D000822 ORTHO05D002021 1.1e-06 55.8 36 61.1
Migut.L01176 Erythranthe guttata HOM05D000822 ORTHO05D002021 1.1e-06 55.8 36 61.1
Eucgr.B02683 Eucalyptus grandis HOM05D000822 ORTHO05D002021 1.1e-06 55.8 36 63.9
Os02g0736200 Oryza sativa ssp. japonica HOM05D000822 ORTHO05D002021 1.1e-06 55.8 36 63.9
BcaC05g25398 Brassica carinata HOM05D000822 ORTHO05D002021 1.4e-06 55.5 36 63.9
BcaC05g25400 Brassica carinata HOM05D000822 ORTHO05D002021 1.4e-06 55.5 36 63.9
C05p12740 Brassica napus HOM05D000822 ORTHO05D002021 1.4e-06 55.5 36 63.9
BolC5t30018H Brassica oleracea HOM05D000822 ORTHO05D002021 1.4e-06 55.5 36 63.9
CARHR015330 Cardamine hirsuta HOM05D000822 ORTHO05D002021 1.4e-06 55.5 36 61.1
ClCG07G005370 Citrullus lanatus HOM05D000822 ORTHO05D002021 1.4e-06 55.5 36 63.9
Lj2g0001685 Lotus japonicus HOM05D000822 ORTHO05D002021 1.4e-06 55.5 36 63.9
RcHm_v2.0_Chr4g0442751 Rosa chinensis HOM05D000822 ORTHO05D002021 1.4e-06 55.5 36 61.1
Actinidia12401 Actinidia chinensis HOM05D000822 ORTHO05D002021 1.8e-06 55.1 36 63.9
A06p10850 Brassica napus HOM05D000822 ORTHO05D002021 1.8e-06 55.1 36 63.9
BraA06t24263Z Brassica rapa HOM05D000822 ORTHO05D002021 1.8e-06 55.1 36 63.9
MELO3C005257.2 Cucumis melo HOM05D000822 ORTHO05D002021 1.8e-06 55.1 46 56.5
Thhalv10006629m.g Eutrema salsugineum HOM05D000822 ORTHO05D002021 1.8e-06 55.1 36 63.9
Sp1g13230 Schrenkiella parvula HOM05D000822 ORTHO05D002021 1.8e-06 55.1 36 63.9
Solyc05g007510.4 Solanum lycopersicum HOM05D000822 ORTHO05D002021 1.8e-06 55.1 36 63.9
Sopen05g003390 Solanum pennellii HOM05D000822 ORTHO05D002021 1.8e-06 55.1 36 63.9
MELO3C005284.2 Cucumis melo HOM05D000822 ORTHO05D002021 2.4e-06 54.7 46 54.3
Lj6A529G69 Lonicera japonica HOM05D000822 ORTHO05D002021 2.4e-06 54.7 36 63.9
Medtr1g032590 Medicago truncatula HOM05D000822 ORTHO05D002021 2.4e-06 54.7 36 63.9
CiPaw.06G053700 Carya illinoinensis HOM05D000822 ORTHO05D002021 3.1e-06 54.3 36 63.9
ClCG01G006450 Citrullus lanatus HOM05D000822 ORTHO05D002021 3.1e-06 54.3 46 54.3
Lj6A528T46 Lonicera japonica HOM05D000822 ORTHO05D002021 3.1e-06 54.3 36 63.9
Lj6C529T7 Lonicera japonica HOM05D000822 ORTHO05D002021 3.1e-06 54.3 36 63.9
Manes.17G084733 Manihot esculenta HOM05D000822 ORTHO05D002021 3.1e-06 54.3 36 63.9
Manes.17G084800 Manihot esculenta HOM05D000822 ORTHO05D002021 3.1e-06 54.3 36 63.9
Potri.008G135800 Populus trichocarpa HOM05D000822 ORTHO05D002021 3.1e-06 54.3 36 63.9
TAR371G0134 Trochodendron aralioides HOM05D000822 ORTHO05D002021 3.1e-06 54.3 36 61.1
Aa31LG1G300 Aethionema arabicum HOM05D000822 ORTHO05D002021 4.1e-06 53.9 36 63.9
CAN.G58.22 Capsicum annuum HOM05D000822 ORTHO05D002021 4.1e-06 53.9 36 61.1
CiPaw.06G054400 Carya illinoinensis HOM05D000822 ORTHO05D002021 4.1e-06 53.9 36 61.1
Lj6A529T68 Lonicera japonica HOM05D000822 ORTHO05D002021 4.1e-06 53.9 36 63.9
Lj6A531T23 Lonicera japonica HOM05D000822 ORTHO05D002021 4.1e-06 53.9 36 63.9
Lj6A533T44 Lonicera japonica HOM05D000822 ORTHO05D002021 4.1e-06 53.9 36 63.9
MD13G1041300 Malus domestica HOM05D000822 ORTHO05D002021 4.1e-06 53.9 36 63.9
Rhsim09G0088700 Rhododendron simsii HOM05D000822 ORTHO05D002021 4.1e-06 53.9 39 59.0
Sabra08G0103800 Salix brachista HOM05D000822 ORTHO05D002021 4.1e-06 53.9 36 63.9
PGSC0003DMG400031261 Solanum tuberosum HOM05D000822 ORTHO05D002021 4.1e-06 53.9 36 63.9
PGSC0003DMG400031269 Solanum tuberosum HOM05D000822 ORTHO05D002021 4.1e-06 53.9 36 63.9
BcaC09g48317 Brassica carinata HOM05D000822 ORTHO05D016049 5.3e-06 53.5 25 92.0
Carub.0001s1459 Capsella rubella HOM05D000822 ORTHO05D002021 5.3e-06 53.5 36 61.1
Cc11_g06940 Coffea canephora HOM05D000822 ORTHO05D002021 5.3e-06 53.5 36 61.1
Cc11_g06970 Coffea canephora HOM05D000822 ORTHO05D002021 5.3e-06 53.5 36 61.1
Dinv26358 Davidia involucrata HOM05D000822 ORTHO05D002021 5.3e-06 53.5 36 63.9
Eucgr.B02678 Eucalyptus grandis HOM05D000822 ORTHO05D002021 5.3e-06 53.5 36 61.1
Eucgr.B02681 Eucalyptus grandis HOM05D000822 ORTHO05D002021 5.3e-06 53.5 36 61.1
Eucgr.L02623 Eucalyptus grandis HOM05D000822 ORTHO05D002021 5.3e-06 53.5 36 61.1
FAN07G0634 Fragaria x ananassa HOM05D000822 ORTHO05D002021 5.3e-06 53.5 48 52.1
FAN07G1833 Fragaria x ananassa HOM05D000822 ORTHO05D002021 5.3e-06 53.5 48 52.1
FAN12G3168 Fragaria x ananassa HOM05D000822 ORTHO05D002021 5.3e-06 53.5 48 52.1
MD16G1017200 Malus domestica HOM05D000822 ORTHO05D002021 5.3e-06 53.5 36 63.9
Potri.010G104900 Populus trichocarpa HOM05D000822 ORTHO05D002021 5.3e-06 53.5 36 63.9
Potri.010G105200 Populus trichocarpa HOM05D000822 ORTHO05D002021 5.3e-06 53.5 36 63.9
Sabra10G0077300 Salix brachista HOM05D000822 ORTHO05D002021 5.3e-06 53.5 36 63.9
Zm00001eb253860 Zea mays HOM05D000822 ORTHO05D002021 5.3e-06 53.5 36 61.1
EL10Ac2g02895 Beta vulgaris HOM05D000822 ORTHO05D002021 7.0e-06 53.1 36 61.1
EL10Ac2g02896 Beta vulgaris HOM05D000822 ORTHO05D002021 7.0e-06 53.1 36 61.1
EL10Ac2g02898 Beta vulgaris HOM05D000822 ORTHO05D002021 7.0e-06 53.1 36 61.1
AUR62030555 Chenopodium quinoa HOM05D000822 ORTHO05D002021 7.0e-06 53.1 36 61.1
Haze_10862 Corylus avellana HOM05D000822 ORTHO05D002021 7.0e-06 53.1 36 61.1
FAN17G2202 Fragaria x ananassa HOM05D000822 ORTHO05D002021 7.0e-06 53.1 48 52.1
Nitab4.5_0000654g0010 Nicotiana tabacum HOM05D000822 ORTHO05D002021 7.0e-06 53.1 36 61.1
Nitab4.5_0009221g0010 Nicotiana tabacum HOM05D000822 ORTHO05D002021 7.0e-06 53.1 36 61.1
Thecc.02G309500 Theobroma cacao HOM05D000822 ORTHO05D002021 7.0e-06 53.1 36 58.3
TWI53G0228 Tripterygium wilfordii HOM05D000822 ORTHO05D002021 7.0e-06 53.1 36 63.9
TAR629G0195 Trochodendron aralioides HOM05D000822 ORTHO05D002021 7.0e-06 53.1 36 61.1
GSVIVG01011643001 Vitis vinifera HOM05D000822 ORTHO05D002021 7.0e-06 53.1 36 61.1
CiPaw.03G222500 Carya illinoinensis HOM05D000822 ORTHO05D002021 9.1e-06 52.8 36 61.1
Gohir.A13G027000 Gossypium hirsutum HOM05D000822 ORTHO05D002021 9.1e-06 52.8 36 61.1
Gohir.D13G025800 Gossypium hirsutum HOM05D000822 ORTHO05D002021 9.1e-06 52.8 36 61.1
Gorai.013G029000 Gossypium raimondii HOM05D000822 ORTHO05D002021 9.1e-06 52.8 36 61.1
Lj6A736G83 Lonicera japonica HOM05D000822 ORTHO05D002021 9.1e-06 52.8 36 61.1
MD16G1017600 Malus domestica HOM05D000822 ORTHO05D002021 9.1e-06 52.8 35 62.9
Prupe.1G332600 Prunus persica HOM05D000822 ORTHO05D002021 9.1e-06 52.8 35 60.0
Hund15690 Selenicereus undatus HOM05D000822 ORTHO05D002021 9.1e-06 52.8 36 61.1


User provided reference genes

Program Settings