Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p50150 Brassica napus HOM05D001415 ORTHO05D001075 1.0e-27 125.9 60 100.0
BolC1t04969H Brassica oleracea HOM05D001415 ORTHO05D001075 8.3e-22 106.3 49 100.0
BraA01t03976Z Brassica rapa HOM05D001415 ORTHO05D001075 9.2e-21 102.8 49 98.0
A01p39330 Brassica napus HOM05D001415 ORTHO05D001075 2.0e-20 101.7 49 95.9
A03p38770 Brassica napus HOM05D001415 ORTHO05D001075 6.0e-20 100.1 49 95.9
A05p35030 Brassica napus HOM05D001415 ORTHO05D001075 6.0e-20 100.1 49 95.9
C05p52990 Brassica napus HOM05D001415 ORTHO05D001075 6.0e-20 100.1 49 95.9
BolC3t16958H Brassica oleracea HOM05D001415 ORTHO05D001075 6.0e-20 100.1 49 95.9
BraA03t13025Z Brassica rapa HOM05D001415 ORTHO05D001075 6.0e-20 100.1 49 95.9
BraA05t22317Z Brassica rapa HOM05D001415 ORTHO05D001075 6.0e-20 100.1 49 95.9
CARHR089420 Cardamine hirsuta HOM05D001415 ORTHO05D001075 1.7e-19 98.6 48 93.8
BolC5t33977H Brassica oleracea HOM05D001415 ORTHO05D001075 3.9e-19 97.4 49 93.9
AL3G26700 Arabidopsis lyrata HOM05D001415 ORTHO05D001075 1.9e-18 95.1 49 91.8
AT3G14362 Arabidopsis thaliana HOM05D001415 ORTHO05D001075 1.9e-18 95.1 49 91.8
Carub.0003s1407 Capsella rubella HOM05D001415 ORTHO05D001075 1.9e-18 95.1 49 91.8
A08p01440 Brassica napus HOM05D001415 ORTHO05D001075 3.3e-18 94.4 49 89.8
AL1G62400 Arabidopsis lyrata HOM05D001415 ORTHO05D001075 5.6e-18 93.6 49 89.8
AT1G53708 Arabidopsis thaliana HOM05D001415 ORTHO05D001075 1.6e-17 92.0 48 87.5
Carub.0001s4298 Capsella rubella HOM05D001415 ORTHO05D001075 1.6e-17 92.0 48 87.5
BolC6t36025H Brassica oleracea HOM05D001415 ORTHO05D001075 2.8e-17 91.3 49 87.8
BraA08t32195Z Brassica rapa HOM05D001415 ORTHO05D001075 2.8e-17 91.3 49 87.8
Aa31LG8G1630 Aethionema arabicum HOM05D000146 ORTHO05D007947 8.1e-17 89.7 45 91.1
BolC3t21494H Brassica oleracea HOM05D001415 ORTHO05D001075 8.1e-17 89.7 49 85.7
THA.LOC104822609 Tarenaya hassleriana HOM05D001415 ORTHO05D001075 3.1e-16 87.8 49 83.7
THA.LOC104810403 Tarenaya hassleriana HOM05D001415 ORTHO05D001075 2.2e-14 81.6 49 75.5
Nn6g31497 Nelumbo nucifera HOM05D001415 ORTHO05D001075 1.2e-12 75.9 40 80.0
Manes.04G152500 Manihot esculenta HOM05D001415 ORTHO05D001075 2.7e-12 74.7 40 80.0
Duzib192G0302 Durio zibethinus HOM05D001415 ORTHO05D001075 4.6e-12 73.9 40 80.0
Thecc.06G132000 Theobroma cacao HOM05D001415 ORTHO05D001075 7.8e-12 73.2 60 61.7
Potri.003G073900 Populus trichocarpa HOM05D001415 ORTHO05D001075 1.3e-11 72.4 41 75.6
Gohir.A10G049600 Gossypium hirsutum HOM05D001415 ORTHO05D001075 3.9e-11 70.9 40 77.5
COL.COLO4_30888 Corchorus olitorius HOM05D001415 ORTHO05D001075 5.1e-11 70.5 60 60.0
Gohir.D06G147900 Gossypium hirsutum HOM05D001415 ORTHO05D001075 6.6e-11 70.1 60 61.7
Gorai.010G172400 Gossypium raimondii HOM05D001415 ORTHO05D001075 6.6e-11 70.1 60 61.7
PGR119G2183 Punica granatum HOM05D001415 ORTHO05D001075 6.6e-11 70.1 40 77.5
Phvul.009G260600 Phaseolus vulgaris HOM05D001415 ORTHO05D001075 8.6e-11 69.7 40 80.0
Gohir.D05G144700 Gossypium hirsutum HOM05D001415 ORTHO05D001075 1.1e-10 69.3 60 56.7
Gorai.009G148600 Gossypium raimondii HOM05D001415 ORTHO05D001075 1.1e-10 69.3 60 56.7
Lj1g0021078 Lotus japonicus HOM05D001415 ORTHO05D001075 1.1e-10 69.3 40 77.5
DCAR_022634 Daucus carota HOM05D001415 ORTHO05D001075 1.9e-10 68.6 51 58.8
Gohir.A05G142400 Gossypium hirsutum HOM05D001415 ORTHO05D001075 1.9e-10 68.6 60 56.7
Gohir.D10G050300 Gossypium hirsutum HOM05D001415 ORTHO05D001075 2.5e-10 68.2 40 75.0
Gorai.011G053800 Gossypium raimondii HOM05D001415 ORTHO05D001075 2.5e-10 68.2 40 75.0
CiPaw.01G210100 Carya illinoinensis HOM05D001415 ORTHO05D001075 3.3e-10 67.8 40 75.0
Glyma.07G047000 Glycine max HOM05D001415 ORTHO05D001075 3.3e-10 67.8 61 62.3
Lalb_Chr10g0101041 Lupinus albus HOM05D001415 ORTHO05D001075 3.3e-10 67.8 40 75.0
Potri.001G161200 Populus trichocarpa HOM05D001415 ORTHO05D001075 3.3e-10 67.8 38 76.3
SalBow6G2192 Salvia bowleyana HOM05D001415 ORTHO05D001075 3.3e-10 67.8 60 58.3
Glyma.16G015200 Glycine max HOM05D001415 ORTHO05D001075 4.3e-10 67.4 62 59.7
Potri.002G235101 Populus trichocarpa HOM05D001415 ORTHO05D001075 5.6e-10 67.0 40 72.5
Lalb_Chr18g0044821 Lupinus albus HOM05D001415 ORTHO05D001075 7.3e-10 66.6 40 75.0
Lalb_Chr04g0254011 Lupinus albus HOM05D001415 ORTHO05D001075 9.5e-10 66.2 60 61.7
Atru.chr1.4181 Acer truncatum HOM05D001415 ORTHO05D001075 1.2e-09 65.9 55 65.5
Ca_23470_v3 Cicer arietinum L. HOM05D001415 ORTHO05D001075 1.6e-09 65.5 60 60.0
MD09G1171200 Malus domestica HOM05D001415 ORTHO05D001075 1.6e-09 65.5 39 71.8
Aqoxy7G04200 Aquilegia oxysepala HOM05D001415 ORTHO05D001075 2.1e-09 65.1 40 72.5
Gohir.A06G142100 Gossypium hirsutum HOM05D001415 ORTHO05D001075 2.1e-09 65.1 57 61.4
Prupe.3G029700 Prunus persica HOM05D001415 ORTHO05D001075 2.1e-09 65.1 38 73.7
Cpa.g.sc157.2 Carica papaya HOM05D001415 ORTHO05D001075 2.8e-09 64.7 62 54.8
CsaV3_7G033880 Cucumis sativus L. HOM05D001415 ORTHO05D001075 2.8e-09 64.7 51 62.7
Migut.I01146 Erythranthe guttata HOM05D001415 ORTHO05D001075 2.8e-09 64.7 37 75.7
arahy.Tifrunner.gnm1.ann1.S2C0P1 Arachis hypogaea HOM05D001415 ORTHO05D001075 3.6e-09 64.3 43 69.8
MELO3C024301.2 Cucumis melo HOM05D001415 ORTHO05D001075 4.7e-09 63.9 39 71.8
SalBow7G1955 Salvia bowleyana HOM05D001415 ORTHO05D001075 4.7e-09 63.9 37 75.7
RcHm_v2.0_Chr2g0148241 Rosa chinensis HOM05D001415 ORTHO05D001075 1.4e-08 62.4 36 75.0
PGSC0003DMG400009157 Solanum tuberosum HOM05D001415 ORTHO05D001075 1.4e-08 62.4 40 70.0
ATR0626G034 Amborella trichopoda HOM05D001415 ORTHO05D001075 1.8e-08 62.0 43 65.1
Migut.D00904 Erythranthe guttata HOM05D001415 ORTHO05D001075 1.8e-08 62.0 34 79.4
Medtr8g023610 Medicago truncatula HOM05D001415 ORTHO05D001075 1.8e-08 62.0 60 58.3
TPR.G26464 Trifolium pratense HOM05D001415 ORTHO05D001075 2.3e-08 61.6 60 58.3
CAN.G790.46 Capsicum annuum HOM05D001415 ORTHO05D001075 3.1e-08 61.2 40 67.5
THA.LOC104800681 Tarenaya hassleriana HOM05D008503 ORTHO05D001075 2.6e-07 58.2 39 61.5
THA.LOC104826316 Tarenaya hassleriana HOM05D008503 ORTHO05D001075 2.6e-07 58.2 44 56.8
CSS0014027 Camellia sinensis var. sinensis HOM05D001415 ORTHO05D001075 3.4e-07 57.8 36 72.2
HanXRQChr10g0312871 Helianthus annuus HOM05D001415 ORTHO05D001075 9.9e-07 56.2 55 52.7
Aqoxy2G02269 Aquilegia oxysepala HOM05D001415 ORTHO05D001075 1.3e-06 55.8 37 67.6
Cpa.g.sc81.113 Carica papaya HOM05D001415 ORTHO05D001075 1.3e-06 55.8 40 60.0
Nn2g11165 Nelumbo nucifera HOM05D001415 ORTHO05D001075 1.3e-06 55.8 37 67.6
AL4G23680 Arabidopsis lyrata HOM05D001415 ORTHO05D001075 1.7e-06 55.5 35 65.7
AT2G29125 Arabidopsis thaliana HOM05D001415 ORTHO05D001075 1.7e-06 55.5 35 65.7
BcaB06g28285 Brassica carinata HOM05D001415 ORTHO05D001075 1.7e-06 55.5 35 65.7
BcaB06g28286 Brassica carinata HOM05D001415 ORTHO05D001075 1.7e-06 55.5 35 65.7
BcaC02g08109 Brassica carinata HOM05D001415 ORTHO05D001075 1.7e-06 55.5 37 62.2
A04p22250 Brassica napus HOM05D008503 ORTHO05D001075 1.7e-06 55.5 37 62.2
BraA04t17777Z Brassica rapa HOM05D008503 ORTHO05D001075 1.7e-06 55.5 37 62.2
Carub.0004s1014 Capsella rubella HOM05D008503 ORTHO05D001075 1.7e-06 55.5 35 65.7
CAN.G1366.20 Capsicum annuum HOM05D001415 ORTHO05D001075 1.7e-06 55.5 41 63.4
CARHR122420 Cardamine hirsuta HOM05D008503 ORTHO05D001075 1.7e-06 55.5 35 65.7
Thhalv10017949m.g Eutrema salsugineum HOM05D001415 ORTHO05D001075 1.7e-06 55.5 35 65.7
Sp4g11940 Schrenkiella parvula HOM05D008503 ORTHO05D001075 1.7e-06 55.5 35 65.7
Dinv37809 Davidia involucrata HOM05D001415 ORTHO05D001075 2.2e-06 55.1 32 78.1
ECA238G4842 Erigeron canadensis HOM05D001415 ORTHO05D001075 2.2e-06 55.1 37 67.6
Lsat_1_v5_gn_2_118460 Lactuca sativa HOM05D001415 ORTHO05D001075 2.2e-06 55.1 37 67.6
Sed0019804 Sechium edule HOM05D001415 ORTHO05D001075 2.2e-06 55.1 35 65.7
CsaV3_4G003150 Cucumis sativus L. HOM05D001415 ORTHO05D001075 2.9e-06 54.7 49 53.1
Gohir.A13G018500 Gossypium hirsutum HOM05D001415 ORTHO05D001075 2.9e-06 54.7 41 63.4
Gohir.D13G019500 Gossypium hirsutum HOM05D001415 ORTHO05D001075 2.9e-06 54.7 41 63.4
Gorai.013G021600 Gossypium raimondii HOM05D001415 ORTHO05D001075 2.9e-06 54.7 41 63.4
HanXRQChr09g0250171 Helianthus annuus HOM05D001415 ORTHO05D001075 2.9e-06 54.7 41 56.1
PGR102G0519 Punica granatum HOM05D001415 ORTHO05D001075 2.9e-06 54.7 35 65.7
Ciclev10030229m.g Citrus clementina HOM05D001415 ORTHO05D001075 3.7e-06 54.3 40 57.5
Duzib128G0356 Durio zibethinus HOM05D001415 ORTHO05D001075 3.7e-06 54.3 41 63.4
PSO135G0377 Papaver somniferum HOM05D001415 ORTHO05D001075 3.7e-06 54.3 33 69.7
CSS0013409 Camellia sinensis var. sinensis HOM05D001415 ORTHO05D001075 4.9e-06 53.9 37 64.9
ClCG09G019600 Citrullus lanatus HOM05D001415 ORTHO05D001075 4.9e-06 53.9 51 52.9
Eucgr.J01236 Eucalyptus grandis HOM05D001415 ORTHO05D001075 4.9e-06 53.9 37 62.2
ClCG03G001360 Citrullus lanatus HOM05D001415 ORTHO05D001075 6.4e-06 53.5 33 66.7
ClCG07G003480 Citrullus lanatus HOM05D001415 ORTHO05D001075 6.4e-06 53.5 37 62.2
MELO3C020615.2 Cucumis melo HOM05D001415 ORTHO05D001075 6.4e-06 53.5 33 66.7
MELO3C023874.2 Cucumis melo HOM05D001415 ORTHO05D001075 6.4e-06 53.5 37 62.2
CsaV3_1G034460 Cucumis sativus L. HOM05D001415 ORTHO05D001075 6.4e-06 53.5 33 66.7
Nn2g13402 Nelumbo nucifera HOM05D001415 ORTHO05D001075 6.4e-06 53.5 37 64.9
Rhsim03G0133500 Rhododendron simsii HOM05D001415 ORTHO05D001075 6.4e-06 53.5 36 66.7
SalBow6G6345 Salvia bowleyana HOM05D001415 ORTHO05D001075 6.4e-06 53.5 37 64.9
Sed0008013 Sechium edule HOM05D001415 ORTHO05D001075 6.4e-06 53.5 33 66.7
Actinidia02936 Actinidia chinensis HOM05D001415 ORTHO05D001075 8.4e-06 53.1 39 61.5
MELO3C021616.2 Cucumis melo HOM05D001415 ORTHO05D001075 8.4e-06 53.1 51 52.9
CsaV3_5G026780 Cucumis sativus L. HOM05D001415 ORTHO05D001075 8.4e-06 53.1 51 52.9
Glyma.02G248900 Glycine max HOM05D001415 ORTHO05D001075 8.4e-06 53.1 37 64.9
MD01G1136300 Malus domestica HOM05D001415 ORTHO05D001075 8.4e-06 53.1 41 58.5
MD07G1201200 Malus domestica HOM05D001415 ORTHO05D001075 8.4e-06 53.1 41 56.1
Sed0008951 Sechium edule HOM05D001415 ORTHO05D001075 8.4e-06 53.1 57 45.6


User provided reference genes

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