Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g48787 Brassica carinata HOM05D001738 ORTHO05D001644 3.4e-55 218.0 103 100.0
C01p45920 Brassica napus HOM05D001738 ORTHO05D001644 3.4e-55 218.0 103 100.0
C01p46040 Brassica napus HOM05D001738 ORTHO05D001644 3.4e-55 218.0 103 100.0
BolC1t04554H Brassica oleracea HOM05D001738 ORTHO05D001644 3.4e-55 218.0 103 100.0
A01p36040 Brassica napus HOM05D001738 ORTHO05D001644 3.7e-54 214.5 103 99.0
BraA01t03683Z Brassica rapa HOM05D001738 ORTHO05D001644 3.7e-54 214.5 103 99.0
C07p00460 Brassica napus HOM05D001738 ORTHO05D001644 4.9e-46 187.6 102 89.2
BcaB06g28896 Brassica carinata HOM05D001738 ORTHO05D001644 3.4e-39 164.9 107 76.6
BcaC06g36748 Brassica carinata HOM05D001738 ORTHO05D001644 2.3e-35 152.1 78 93.6
A08p08620 Brassica napus HOM05D001738 ORTHO05D001644 3.2e-29 131.7 106 63.2
BraA08t32876Z Brassica rapa HOM05D001738 ORTHO05D001644 3.2e-29 131.7 106 63.2
AL4G18870 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 2.1e-28 129.0 106 62.3
AL5G16800 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 9.5e-26 120.2 110 59.1
Carub.0001s1342 Capsella rubella HOM05D001738 ORTHO05D001644 1.4e-24 116.3 106 52.8
BolC8t52365H Brassica oleracea HOM05D001738 ORTHO05D001644 6.8e-24 114.0 106 56.6
BcaB08g37391 Brassica carinata HOM05D001738 ORTHO05D001644 4.4e-23 111.3 105 55.2
A09p64880 Brassica napus HOM05D001738 ORTHO05D001644 1.4e-21 106.3 105 49.5
AL1G22300 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 3.2e-21 105.1 109 52.3
AL1G23150 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 4.2e-21 104.8 108 51.9
A09p64530 Brassica napus HOM05D001738 ORTHO05D001644 5.4e-21 104.4 105 47.6
BraA09t41802Z Brassica rapa HOM05D001738 ORTHO05D001644 5.4e-21 104.4 105 47.6
A09p64540 Brassica napus HOM05D001738 ORTHO05D001644 1.2e-20 103.2 105 48.6
BraA09t41803Z Brassica rapa HOM05D001738 ORTHO05D001644 1.2e-20 103.2 105 48.6
AL8G23030 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 3.5e-20 101.7 110 50.9
A09p64890 Brassica napus HOM05D001738 ORTHO05D001644 1.0e-19 100.1 105 47.6
BraA09t41808Z Brassica rapa HOM05D001738 ORTHO05D001644 1.0e-19 100.1 105 47.6
A01p12930 Brassica napus HOM05D001738 ORTHO05D001644 1.3e-19 99.8 104 52.9
BraA01t01237Z Brassica rapa HOM05D001738 ORTHO05D001644 1.3e-19 99.8 104 52.9
C08p48460 Brassica napus HOM05D001738 ORTHO05D001644 1.7e-19 99.4 111 45.9
BolC8t52384H Brassica oleracea HOM05D001738 ORTHO05D001644 2.3e-19 99.0 111 45.9
BcaNung06201 Brassica carinata HOM05D001738 ORTHO05D001644 3.9e-19 98.2 111 45.9
BcaNung02775 Brassica carinata HOM05D001738 ORTHO05D001644 1.5e-18 96.3 106 48.1
A02p32990 Brassica napus HOM05D001738 ORTHO05D001644 2.8e-17 92.0 107 50.5
BolC8t47900H Brassica oleracea HOM05D001738 ORTHO05D001644 2.8e-17 92.0 77 59.7
BolC2t11157H Brassica oleracea HOM05D001738 ORTHO05D001644 8.1e-17 90.5 107 49.5
C03p83170 Brassica napus HOM05D001738 ORTHO05D001644 1.4e-16 89.7 107 48.6
BcaB07g30292 Brassica carinata HOM05D001738 ORTHO05D001644 2.4e-16 89.0 107 48.6
AL1G58940 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 3.1e-16 88.6 109 50.5
C02p50730 Brassica napus HOM05D001738 ORTHO05D001644 3.1e-16 88.6 107 48.6
BolC2t11152H Brassica oleracea HOM05D001738 ORTHO05D001644 3.1e-16 88.6 107 48.6
BolC3t20600H Brassica oleracea HOM05D001738 ORTHO05D001644 4.0e-16 88.2 107 47.7
BcaC07g37559 Brassica carinata HOM05D001738 ORTHO05D001644 6.9e-16 87.4 101 49.5
Carub.0006s0880 Capsella rubella HOM05D001738 ORTHO05D001644 6.9e-16 87.4 106 48.1
BraA02t08324Z Brassica rapa HOM05D001738 ORTHO05D001644 9.0e-16 87.0 107 47.7
CARHR014880 Cardamine hirsuta HOM05D001738 ORTHO05D001644 1.5e-15 86.3 104 47.1
BcaB03g13098 Brassica carinata HOM05D001738 ORTHO05D001644 3.4e-15 85.1 106 42.5
Thhalv10009873m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 5.8e-15 84.3 116 43.1
A08p15080 Brassica napus HOM05D001738 ORTHO05D001644 9.9e-15 83.6 107 46.7
Thhalv10007821m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 6.4e-14 80.9 113 41.6
AL1G20200 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 1.1e-13 80.1 104 43.3
AT1G09650 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 1.9e-13 79.3 111 41.4
BcaC04g20153 Brassica carinata HOM05D001738 ORTHO05D001644 2.4e-13 79.0 109 45.9
C04p12640 Brassica napus HOM05D001738 ORTHO05D001644 2.4e-13 79.0 109 45.9
A01p36190 Brassica napus HOM05D001738 ORTHO05D001644 5.4e-13 77.8 36 97.2
BraA08t35119Z Brassica rapa HOM05D001738 ORTHO05D001644 5.4e-13 77.8 109 44.0
BcaC04g18744 Brassica carinata HOM05D001738 ORTHO05D001644 7.1e-13 77.4 111 45.9
C09p47220 Brassica napus HOM05D001738 ORTHO05D001644 7.1e-13 77.4 109 45.0
C09p59130 Brassica napus HOM05D001738 ORTHO05D001644 7.1e-13 77.4 111 45.9
BolC9t57577H Brassica oleracea HOM05D001738 ORTHO05D001644 7.1e-13 77.4 109 45.0
Carub.0003s2506 Capsella rubella HOM05D001738 ORTHO05D001644 9.3e-13 77.0 107 43.0
AL6G20830 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 1.6e-12 76.3 106 44.3
AT5G10340 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 1.6e-12 76.3 106 45.3
A08p31980 Brassica napus HOM05D001738 ORTHO05D001644 1.6e-12 76.3 109 43.1
BolC4t22913H Brassica oleracea HOM05D001738 ORTHO05D001644 1.0e-11 73.6 109 45.0
BolC9t58733H Brassica oleracea HOM05D001738 ORTHO05D001644 1.7e-11 72.8 109 44.0
CARHR119930 Cardamine hirsuta HOM05D001738 ORTHO05D001644 2.3e-11 72.4 111 42.3
BcaC07g38736 Brassica carinata HOM05D001738 ORTHO05D001644 3.9e-11 71.6 102 45.1
BraA08t33488Z Brassica rapa HOM05D001738 ORTHO05D001644 3.9e-11 71.6 107 43.9
CARHR035940 Cardamine hirsuta HOM05D001738 ORTHO05D001644 3.9e-11 71.6 116 41.4
AT4G01640 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 5.1e-11 71.2 107 41.1
AT1G12490 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 8.7e-11 70.5 109 37.6
A06p37480 Brassica napus HOM05D001738 ORTHO05D001644 8.7e-11 70.5 105 38.1
BraA06t26672Z Brassica rapa HOM05D001738 ORTHO05D001644 8.7e-11 70.5 105 38.1
AT2G34280 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 1.5e-10 69.7 107 40.2
BcaNung02452 Brassica carinata HOM05D001738 ORTHO05D001644 1.5e-10 69.7 110 41.8
C07p40890 Brassica napus HOM05D001738 ORTHO05D001644 1.5e-10 69.7 110 41.8
BolC7t44617H Brassica oleracea HOM05D001738 ORTHO05D001644 1.5e-10 69.7 110 41.8
AL5G25310 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 1.9e-10 69.3 108 39.8
BcaB07g33225 Brassica carinata HOM05D001738 ORTHO05D001644 1.9e-10 69.3 111 44.1
C05p23420 Brassica napus HOM05D001738 ORTHO05D001644 2.5e-10 68.9 107 39.3
CARHR125670 Cardamine hirsuta HOM05D001738 ORTHO05D001644 2.5e-10 68.9 106 38.7
BcaB07g32397 Brassica carinata HOM05D001738 ORTHO05D001644 3.3e-10 68.6 102 38.2
BcaC05g26334 Brassica carinata HOM05D001738 ORTHO05D001644 3.3e-10 68.6 88 42.0
A06p37470 Brassica napus HOM05D001738 ORTHO05D001644 3.3e-10 68.6 110 41.8
BcaC02g11659 Brassica carinata HOM05D001738 ORTHO05D001644 9.6e-10 67.0 104 43.3
AL7G46450 Arabidopsis lyrata HOM05D000626 ORTHO05D001644 1.3e-09 66.6 66 56.1
BcaC05g26332 Brassica carinata HOM05D001738 ORTHO05D001644 1.3e-09 66.6 104 40.4
BolC5t31051H Brassica oleracea HOM05D001738 ORTHO05D001644 1.3e-09 66.6 104 40.4
CARHR124000 Cardamine hirsuta HOM05D001738 ORTHO05D001644 1.3e-09 66.6 107 39.3
Carub.0008s0923 Capsella rubella HOM05D001738 ORTHO05D001644 1.6e-09 66.2 110 39.1
CARHR099040 Cardamine hirsuta HOM05D001738 ORTHO05D001644 2.1e-09 65.9 82 50.0
Sp1g27610 Schrenkiella parvula HOM05D001738 ORTHO05D001644 2.1e-09 65.9 108 39.8
Carub.0006s1692 Capsella rubella HOM05D001738 ORTHO05D001644 2.8e-09 65.5 112 41.1
A09p40630 Brassica napus HOM05D001738 ORTHO05D001644 4.8e-09 64.7 88 40.9
BcaC07g41803 Brassica carinata HOM05D001738 ORTHO05D001644 8.1e-09 63.9 49 53.1
Thhalv10021998m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 8.1e-09 63.9 87 43.7
AT1G14315 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 1.1e-08 63.5 101 41.6
A09p40640 Brassica napus HOM05D001738 ORTHO05D001644 1.4e-08 63.2 104 39.4
Thhalv10021927m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 1.8e-08 62.8 96 36.5
BraA09t39559Z Brassica rapa HOM05D001738 ORTHO05D001644 2.4e-08 62.4 88 39.8
C05p23430 Brassica napus HOM05D001738 ORTHO05D001644 5.3e-08 61.2 78 41.0
C02p51750 Brassica napus HOM05D001738 ORTHO05D001644 6.9e-08 60.8 55 61.8
Thhalv10009680m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 6.9e-08 60.8 110 40.9
BcaC04g19443 Brassica carinata HOM05D001738 ORTHO05D001644 1.5e-07 59.7 75 49.3
BcaC03g13251 Brassica carinata HOM05D001738 ORTHO05D001644 2.0e-07 59.3 109 37.6
BolC2t06345H Brassica oleracea HOM05D001738 ORTHO05D001644 2.0e-07 59.3 109 37.6
BcaB04g18151 Brassica carinata HOM05D001738 ORTHO05D001644 4.5e-07 58.2 108 37.0
BcaB04g18152 Brassica carinata HOM05D001738 ORTHO05D001644 4.5e-07 58.2 108 37.0
BcaB03g11687 Brassica carinata HOM05D001738 ORTHO05D001644 5.8e-07 57.8 65 50.8
CARHR125660 Cardamine hirsuta HOM05D001738 ORTHO05D001644 5.8e-07 57.8 106 35.8
Thhalv10003053m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 1.7e-06 56.2 87 40.2
C09p25430 Brassica napus HOM05D001738 ORTHO05D001644 2.2e-06 55.8 109 35.8
BolC9t55442H Brassica oleracea HOM05D001738 ORTHO05D001644 2.2e-06 55.8 109 35.8
A02p33620 Brassica napus HOM05D001738 ORTHO05D001644 2.9e-06 55.5 51 60.8
BcaC01g00689 Brassica carinata HOM05D001738 ORTHO05D001644 4.9e-06 54.7 85 40.0
Thhalv10005403m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 4.9e-06 54.7 41 61.0
Thhalv10006469m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 6.4e-06 54.3 95 38.9
BcaC04g21963 Brassica carinata HOM05D001738 ORTHO05D001644 8.4e-06 53.9 109 35.8


User provided reference genes

Program Settings