Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p44900 Brassica napus HOM05D000561 ORTHO05D022030 1.7e-72 275.8 132 100.0
BolC1t04457H Brassica oleracea HOM05D000561 ORTHO05D000514 1.3e-38 163.3 82 96.3
A01p35390 Brassica napus HOM05D000561 ORTHO05D022030 9.0e-37 157.1 129 67.4
BcaB04g20720 Brassica carinata HOM05D000561 ORTHO05D000514 1.6e-12 76.6 46 78.3
Thhalv10020763m.g Eutrema salsugineum HOM05D000561 ORTHO05D000514 2.2e-11 72.8 45 75.6
Sp3g17200 Schrenkiella parvula HOM05D000561 ORTHO05D000514 5.0e-11 71.6 45 73.3
A06p03550 Brassica napus HOM05D000561 ORTHO05D000514 8.5e-11 70.9 58 53.4
BraA06t23563Z Brassica rapa HOM05D000561 ORTHO05D000514 8.5e-11 70.9 58 53.4
BcaNung06236 Brassica carinata HOM05D000561 ORTHO05D000514 1.1e-10 70.5 58 53.4
C06p04610 Brassica napus HOM05D000561 ORTHO05D000514 1.1e-10 70.5 58 53.4
BolC6t35588H Brassica oleracea HOM05D000561 ORTHO05D000514 1.1e-10 70.5 58 53.4
Carub.0003s1896 Capsella rubella HOM05D000561 ORTHO05D000514 1.1e-10 70.5 47 74.5
Sp1g36480 Schrenkiella parvula HOM05D000561 ORTHO05D000514 1.1e-10 70.5 43 72.1
BcaC01g03648 Brassica carinata HOM05D000561 ORTHO05D000514 1.9e-10 69.7 46 71.7
C03p50130 Brassica napus HOM05D000561 ORTHO05D000514 1.9e-10 69.7 46 71.7
BolC3t17306H Brassica oleracea HOM05D000561 ORTHO05D000514 1.9e-10 69.7 46 71.7
Thhalv10011485m.g Eutrema salsugineum HOM05D000561 ORTHO05D000514 2.5e-10 69.3 30 96.7
BcaB04g17299 Brassica carinata HOM05D000561 ORTHO05D000514 5.5e-10 68.2 43 67.4
BcaB02g11095 Brassica carinata HOM05D000561 ORTHO05D000514 7.2e-10 67.8 45 66.7
Carub.0001s3880 Capsella rubella HOM05D000561 ORTHO05D000514 7.2e-10 67.8 43 69.8
A05p20540 Brassica napus HOM05D000561 ORTHO05D000514 9.4e-10 67.4 58 53.4
BraA05t20964Z Brassica rapa HOM05D000561 ORTHO05D000514 9.4e-10 67.4 58 53.4
BcaC09g48874 Brassica carinata HOM05D000561 ORTHO05D000514 1.2e-09 67.0 46 73.9
A01p35380 Brassica napus HOM05D000561 ORTHO05D000514 1.2e-09 67.0 46 73.9
C01p44890 Brassica napus HOM05D000561 ORTHO05D000514 1.2e-09 67.0 46 73.9
BraA01t03619Z Brassica rapa HOM05D000561 ORTHO05D000514 1.2e-09 67.0 46 73.9
AT3G19130 Arabidopsis thaliana HOM05D000561 ORTHO05D000514 1.6e-09 66.6 31 90.3
CARHR039650 Cardamine hirsuta HOM05D000561 ORTHO05D000514 1.6e-09 66.6 30 93.3
CARHR094540 Cardamine hirsuta HOM05D000561 ORTHO05D000514 1.6e-09 66.6 31 90.3
AL3G32500 Arabidopsis lyrata HOM05D000561 ORTHO05D000514 2.1e-09 66.2 30 93.3
A08p03560 Brassica napus HOM05D000561 ORTHO05D000514 3.6e-09 65.5 30 86.7
BraA08t32390Z Brassica rapa HOM05D000561 ORTHO05D000514 3.6e-09 65.5 30 86.7
BcaC05g27485 Brassica carinata HOM05D000561 ORTHO05D000514 4.7e-09 65.1 43 67.4
C05p34490 Brassica napus HOM05D000561 ORTHO05D000514 4.7e-09 65.1 43 67.4
AL1G56970 Arabidopsis lyrata HOM05D000561 ORTHO05D000514 8.0e-09 64.3 43 65.1
Aa31LG8G5920 Aethionema arabicum HOM05D000561 ORTHO05D000514 1.8e-08 63.2 50 64.0
THA.LOC104801599 Tarenaya hassleriana HOM05D000561 ORTHO05D000514 2.3e-08 62.8 42 66.7
BcaB04g19026 Brassica carinata HOM05D000561 ORTHO05D000514 4.0e-08 62.0 36 75.0
BcaC09g48873 Brassica carinata HOM05D000561 ORTHO05D000514 4.0e-08 62.0 36 75.0
BcaC05g28539 Brassica carinata HOM05D000561 ORTHO05D000514 6.7e-08 61.2 46 69.6
C05p46110 Brassica napus HOM05D000561 ORTHO05D000514 6.7e-08 61.2 46 69.6
C08p03760 Brassica napus HOM05D000561 ORTHO05D000514 6.7e-08 61.2 30 83.3
BolC5t33338H Brassica oleracea HOM05D000561 ORTHO05D000514 6.7e-08 61.2 46 69.6
BcaB06g25967 Brassica carinata HOM05D000561 ORTHO05D000514 2.6e-07 59.3 45 68.9
A05p30480 Brassica napus HOM05D000561 ORTHO05D000514 2.6e-07 59.3 45 68.9
BraA05t21888Z Brassica rapa HOM05D000561 ORTHO05D000514 2.6e-07 59.3 45 68.9
THA.LOC104814138 Tarenaya hassleriana HOM05D000561 ORTHO05D000514 9.7e-07 57.4 31 80.6
Aa31LG10G4410 Aethionema arabicum HOM05D000561 ORTHO05D000514 3.7e-06 55.5 46 58.7
Gohir.A13G039100 Gossypium hirsutum HOM05D000561 ORTHO05D000514 8.2e-06 54.3 29 79.3
Gohir.D13G037600 Gossypium hirsutum HOM05D000561 ORTHO05D000514 8.2e-06 54.3 29 79.3
Gorai.013G042300 Gossypium raimondii HOM05D000561 ORTHO05D000514 8.2e-06 54.3 29 79.3


User provided reference genes

Program Settings