Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p43390 Brassica napus HOM05D001038 ORTHO05D024222 3.9e-38 161.0 83 100.0
BcaC09g49024 Brassica carinata HOM05D001038 ORTHO05D000395 1.8e-22 109.0 73 78.1
BcaC01g02304 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-19 99.8 54 94.4
C03p66800 Brassica napus HOM05D001038 ORTHO05D000395 1.1e-19 99.8 54 94.4
BraA03t13820Z Brassica rapa HOM05D001038 ORTHO05D000395 1.4e-19 99.4 84 64.3
A02p12570 Brassica napus HOM05D001038 ORTHO05D000395 3.1e-19 98.2 85 60.0
BraA08t34502Z Brassica rapa HOM05D001038 ORTHO05D000395 3.1e-19 98.2 104 54.8
BraA09t36747Z Brassica rapa HOM05D001038 ORTHO05D000395 5.3e-19 97.4 95 54.7
C03p52030 Brassica napus HOM05D001038 ORTHO05D000395 9.1e-19 96.7 102 52.9
BolC3t17485H Brassica oleracea HOM05D001038 ORTHO05D000395 9.1e-19 96.7 102 52.9
C02p45440 Brassica napus HOM05D001038 ORTHO05D000395 3.5e-18 94.7 54 85.2
BraA05t21246Z Brassica rapa HOM05D001038 ORTHO05D000395 4.5e-18 94.4 94 54.3
BraA06t25413Z Brassica rapa HOM05D001038 ORTHO05D000395 5.0e-17 90.9 172 39.0
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-16 89.7 52 80.8
BcaB07g30174 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-16 89.7 52 82.7
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-16 89.0 52 78.8
C09p50150 Brassica napus HOM05D001038 ORTHO05D000395 2.5e-16 88.6 52 84.6
BcaC04g23074 Brassica carinata HOM05D001038 ORTHO05D019962 3.2e-16 88.2 52 80.8
BcaC08g47005 Brassica carinata HOM05D001038 ORTHO05D000395 3.2e-16 88.2 52 80.8
BraA06t25652Z Brassica rapa HOM05D001038 ORTHO05D000395 4.2e-16 87.8 86 53.5
BcaC04g19884 Brassica carinata HOM05D001038 ORTHO05D000395 5.5e-16 87.4 52 84.6
BcaB01g00119 Brassica carinata HOM05D001038 ORTHO05D000395 7.2e-16 87.0 52 80.8
BraA06t25335Z Brassica rapa HOM05D001038 ORTHO05D000395 7.2e-16 87.0 86 53.5
BcaB01g01124 Brassica carinata HOM05D001038 ORTHO05D000395 9.4e-16 86.7 52 76.9
BcaB04g19295 Brassica carinata HOM05D001038 ORTHO05D000395 1.6e-15 85.9 54 75.9
BcaB08g35415 Brassica carinata HOM05D001038 ORTHO05D000395 1.6e-15 85.9 52 78.8
C09p45390 Brassica napus HOM05D001038 ORTHO05D024072 1.6e-15 85.9 107 49.5
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-15 85.5 52 76.9
A06p16020 Brassica napus HOM05D001038 ORTHO05D024222 2.1e-15 85.5 48 89.6
A06p36110 Brassica napus HOM05D001038 ORTHO05D024222 2.1e-15 85.5 48 89.6
BraA02t08904Z Brassica rapa HOM05D001038 ORTHO05D000395 2.7e-15 85.1 81 60.5
C04p46240 Brassica napus HOM05D001038 ORTHO05D000395 3.6e-15 84.7 77 61.0
BcaB04g18537 Brassica carinata HOM05D001038 ORTHO05D000395 4.7e-15 84.3 54 68.5
BcaC05g27733 Brassica carinata HOM05D001038 ORTHO05D000395 4.7e-15 84.3 172 37.2
BcaC01g03478 Brassica carinata HOM05D001038 ORTHO05D000395 6.1e-15 84.0 52 76.9
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-14 83.2 54 72.2
BcaNung00468 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-14 82.8 53 75.5
C05p37210 Brassica napus HOM05D001038 ORTHO05D000395 1.4e-14 82.8 167 37.1
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 1.8e-14 82.4 53 71.7
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 1.8e-14 82.4 53 71.7
BolC7t40990H Brassica oleracea HOM05D001957 ORTHO05D002015 2.3e-14 82.0 121 43.8
BcaB05g23513 Brassica carinata HOM05D001038 ORTHO05D000395 3.0e-14 81.6 52 75.0
BcaB07g31487 Brassica carinata HOM05D001038 ORTHO05D000395 3.0e-14 81.6 53 73.6
BolC4t26208H Brassica oleracea HOM05D001038 ORTHO05D000395 3.0e-14 81.6 54 72.2
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 5.2e-14 80.9 52 75.0
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 5.2e-14 80.9 52 75.0
C03p74230 Brassica napus HOM05D001038 ORTHO05D000395 5.2e-14 80.9 52 71.2
C09p39690 Brassica napus HOM05D001038 ORTHO05D000395 5.2e-14 80.9 52 75.0
BolC9t56849H Brassica oleracea HOM05D001038 ORTHO05D000395 5.2e-14 80.9 52 75.0
BcaB08g36368 Brassica carinata HOM05D001038 ORTHO05D000395 6.8e-14 80.5 54 74.1
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 1.2e-13 79.7 52 71.2
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 1.2e-13 79.7 52 71.2
BcaB06g26021 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-13 79.3 52 71.2
BolC3t19681H Brassica oleracea HOM05D001038 ORTHO05D000395 1.5e-13 79.3 52 69.2
BcaB02g07256 Brassica carinata HOM05D001038 ORTHO05D024222 2.0e-13 79.0 52 71.2
BcaC03g15415 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-13 79.0 52 75.0
A03p30780 Brassica napus HOM05D001038 ORTHO05D000395 2.0e-13 79.0 54 72.2
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 2.6e-13 78.6 52 69.2
BraA05t20013Z Brassica rapa HOM05D001038 ORTHO05D000395 2.6e-13 78.6 52 71.2
BolC2t11144H Brassica oleracea HOM05D001038 ORTHO05D040877 4.4e-13 77.8 87 48.3
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 5.7e-13 77.4 52 69.2
A04p08060 Brassica napus HOM05D001038 ORTHO05D000395 5.7e-13 77.4 52 69.2
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 5.7e-13 77.4 52 69.2
BraA03t12256Z Brassica rapa HOM05D001038 ORTHO05D000395 5.7e-13 77.4 54 70.4
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 9.8e-13 76.6 52 69.2
BcaC08g43120 Brassica carinata HOM05D001038 ORTHO05D032078 9.8e-13 76.6 52 71.2
BcaC09g50083 Brassica carinata HOM05D001038 ORTHO05D000395 9.8e-13 76.6 54 68.5
C07p12210 Brassica napus HOM05D001038 ORTHO05D040877 9.8e-13 76.6 82 50.0
BraA07t28816Z Brassica rapa HOM05D001038 ORTHO05D000395 9.8e-13 76.6 51 70.6
BraSC36t46105Z Brassica rapa HOM05D001038 ORTHO05D000395 9.8e-13 76.6 52 71.2
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-12 76.3 52 71.2
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-12 76.3 52 71.2
BNapus_Darmor_BZH_scaffold_104p00080 Brassica napus HOM05D001038 ORTHO05D000395 1.3e-12 76.3 53 69.8
BolC7t42043H Brassica oleracea HOM05D001038 ORTHO05D000395 1.3e-12 76.3 52 69.2
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 2.2e-12 75.5 52 73.1
BolC5t30492H Brassica oleracea HOM05D001038 ORTHO05D000395 2.2e-12 75.5 52 67.3
BolC7t43636H Brassica oleracea HOM05D001038 ORTHO05D000395 2.8e-12 75.1 52 71.2
BraA04t16796Z Brassica rapa HOM05D001038 ORTHO05D000395 2.8e-12 75.1 52 69.2
BolC6t36138H Brassica oleracea HOM05D001038 ORTHO05D014932 3.7e-12 74.7 53 66.0
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 4.8e-12 74.3 52 67.3
BcaC06g34271 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-11 72.8 52 69.2
BolC7t42338H Brassica oleracea HOM05D001038 ORTHO05D000395 1.4e-11 72.8 52 61.5
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 1.8e-11 72.4 71 50.7
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 1.8e-11 72.4 52 67.3
C06p03930 Brassica napus HOM05D001038 ORTHO05D000395 1.8e-11 72.4 48 75.0
C07p13440 Brassica napus HOM05D001038 ORTHO05D016703 1.8e-11 72.4 54 61.1
C07p18280 Brassica napus HOM05D001038 ORTHO05D000395 1.8e-11 72.4 52 61.5
BolC7t41839H Brassica oleracea HOM05D001038 ORTHO05D016703 1.8e-11 72.4 54 61.1
BraA04t16800Z Brassica rapa HOM05D001038 ORTHO05D000395 1.8e-11 72.4 52 67.3
BraA05t20300Z Brassica rapa HOM05D001038 ORTHO05D000395 1.8e-11 72.4 48 75.0
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 3.1e-11 71.6 52 65.4
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 7.0e-11 70.5 52 61.5
BraA02t08028Z Brassica rapa HOM05D001038 ORTHO05D024222 7.0e-11 70.5 46 73.9
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 7.0e-11 70.5 54 59.3
BraA06t25409Z Brassica rapa HOM05D001038 ORTHO05D000395 9.1e-11 70.1 138 34.8
BcaB02g10843 Brassica carinata HOM05D001038 ORTHO05D000395 2.7e-10 68.6 52 61.5
A06p26760 Brassica napus HOM05D001038 ORTHO05D000395 2.7e-10 68.6 64 50.0
BolC7t41409H Brassica oleracea HOM05D001038 ORTHO05D000395 3.5e-10 68.2 50 64.0
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 1.0e-09 66.6 51 54.9
BcaB01g01350 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-09 66.2 51 60.8
BraA06t24005Z Brassica rapa HOM05D001038 ORTHO05D000395 1.7e-09 65.9 48 62.5
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 2.2e-09 65.5 54 59.3
BcaB03g16578 Brassica carinata HOM05D001038 ORTHO05D000395 2.9e-09 65.1 40 75.0
BcaB07g32736 Brassica carinata HOM05D001038 ORTHO05D024484 6.5e-09 63.9 52 59.6
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 6.5e-09 63.9 54 57.4
C03p47220 Brassica napus HOM05D001038 ORTHO05D000395 1.5e-08 62.8 39 76.9
C06p00860 Brassica napus HOM05D001038 ORTHO05D000395 1.9e-08 62.4 50 56.0
BolC3t16968H Brassica oleracea HOM05D001038 ORTHO05D000395 1.9e-08 62.4 50 56.0
BcaB01g03119 Brassica carinata HOM05D001038 ORTHO05D018639 2.5e-08 62.0 56 53.6
BolC3t16999H Brassica oleracea HOM05D001038 ORTHO05D018639 2.5e-08 62.0 53 56.6
BcaB01g02362 Brassica carinata HOM05D001038 ORTHO05D000395 3.2e-08 61.6 52 55.8
A09p58370 Brassica napus HOM05D001038 ORTHO05D000395 3.2e-08 61.6 50 56.0
C08p27920 Brassica napus HOM05D001038 ORTHO05D018639 3.2e-08 61.6 54 55.6
BraA04t18267Z Brassica rapa HOM05D001038 ORTHO05D021830 3.2e-08 61.6 48 62.5
BcaC09g51594 Brassica carinata HOM05D001038 ORTHO05D021830 4.2e-08 61.2 52 57.7
C01p11670 Brassica napus HOM05D001038 ORTHO05D021830 4.2e-08 61.2 52 57.7
BolC1t01131H Brassica oleracea HOM05D001038 ORTHO05D021830 4.2e-08 61.2 52 57.7
BolC3t20321H Brassica oleracea HOM05D001038 ORTHO05D000395 4.2e-08 61.2 50 54.0
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 4.2e-08 61.2 54 51.9
BraA04t18197Z Brassica rapa HOM05D001038 ORTHO05D000395 4.2e-08 61.2 52 53.8
BraA08t34217Z Brassica rapa HOM05D001038 ORTHO05D016716 4.2e-08 61.2 54 53.7
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 7.2e-08 60.5 54 55.6
BcaC06g32026 Brassica carinata HOM05D001038 ORTHO05D000395 9.4e-08 60.1 54 55.6
C05p36690 Brassica napus HOM05D001038 ORTHO05D000395 1.2e-07 59.7 48 58.3
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 1.2e-07 59.7 48 58.3
BolC7t41662H Brassica oleracea HOM05D001038 ORTHO05D031981 1.6e-07 59.3 52 53.8
BcaB06g28542 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-07 58.9 55 47.3
A07p11770 Brassica napus HOM05D001038 ORTHO05D018639 2.1e-07 58.9 52 55.8
BolC5t34489H Brassica oleracea HOM05D001038 ORTHO05D000395 2.1e-07 58.9 50 50.0
BraA07t28962Z Brassica rapa HOM05D001038 ORTHO05D018639 2.1e-07 58.9 52 55.8
BraA04t17286Z Brassica rapa HOM05D001038 ORTHO05D021830 2.7e-07 58.5 48 60.4
BcaC01g04980 Brassica carinata HOM05D001038 ORTHO05D000395 3.6e-07 58.2 52 46.2
BcaNung02282 Brassica carinata HOM05D001038 ORTHO05D000395 3.6e-07 58.2 52 50.0
C09p68940 Brassica napus HOM05D001038 ORTHO05D000395 3.6e-07 58.2 52 50.0
BolC2t07185H Brassica oleracea HOM05D001038 ORTHO05D000395 3.6e-07 58.2 48 60.4
BolC6t36762H Brassica oleracea HOM05D001038 ORTHO05D000395 3.6e-07 58.2 53 52.8
BolC7t44786H Brassica oleracea HOM05D001038 ORTHO05D000395 3.6e-07 58.2 52 50.0
BolC8t47295H Brassica oleracea HOM05D001038 ORTHO05D000395 3.6e-07 58.2 48 60.4
BcaB01g01530 Brassica carinata HOM05D001038 ORTHO05D000395 4.7e-07 57.8 55 47.3
BcaB06g28671 Brassica carinata HOM05D001038 ORTHO05D018639 4.7e-07 57.8 54 55.6
BcaB08g34364 Brassica carinata HOM05D001038 ORTHO05D000395 6.1e-07 57.4 54 48.1
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 6.1e-07 57.4 52 55.8
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 6.1e-07 57.4 53 50.9
BolC4t23574H Brassica oleracea HOM05D001038 ORTHO05D000395 6.1e-07 57.4 50 54.0
BraA04t16612Z Brassica rapa HOM05D001038 ORTHO05D018639 6.1e-07 57.4 50 58.0
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 6.1e-07 57.4 53 50.9
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 6.1e-07 57.4 52 55.8
C04p42380 Brassica napus HOM05D001038 ORTHO05D000395 8.0e-07 57.0 50 54.0
BolC7t43509H Brassica oleracea HOM05D001038 ORTHO05D000395 8.0e-07 57.0 52 51.9
BraA08t32580Z Brassica rapa HOM05D001038 ORTHO05D000395 8.0e-07 57.0 53 47.2
BcaB01g02419 Brassica carinata HOM05D001038 ORTHO05D018639 1.0e-06 56.6 56 50.0
C06p38180 Brassica napus HOM05D001038 ORTHO05D000395 1.4e-06 56.2 69 46.4
BolC4t27362H Brassica oleracea HOM05D001038 ORTHO05D000395 1.4e-06 56.2 53 52.8
BcaB05g21586 Brassica carinata HOM05D001038 ORTHO05D000395 2.3e-06 55.5 55 43.6
BcaC07g37226 Brassica carinata HOM05D000048 ORTHO05D002390 2.3e-06 55.5 50 52.0
BolC1t03990H Brassica oleracea HOM05D001038 ORTHO05D000395 2.3e-06 55.5 53 47.2
BcaC09g51573 Brassica carinata HOM05D001038 ORTHO05D000395 4.0e-06 54.7 54 44.4
C07p60310 Brassica napus HOM05D001038 ORTHO05D000395 4.0e-06 54.7 52 42.3
BolC8t49550H Brassica oleracea HOM05D001038 ORTHO05D000395 4.0e-06 54.7 48 56.2
A07p30050 Brassica napus HOM05D001038 ORTHO05D000395 5.2e-06 54.3 51 51.0
C09p22250 Brassica napus HOM05D001038 ORTHO05D000395 5.2e-06 54.3 54 44.4
BraA01t02128Z Brassica rapa HOM05D001038 ORTHO05D000395 6.8e-06 53.9 29 82.8
BraA07t29115Z Brassica rapa HOM05D001038 ORTHO05D000395 6.8e-06 53.9 55 52.7
BolC7t41648H Brassica oleracea HOM05D001038 ORTHO05D000395 8.8e-06 53.5 64 46.9
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 8.8e-06 53.5 52 44.2


User provided reference genes

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