Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p43230 Brassica napus HOM05D001038 ORTHO05D032341 1.8e-125 452.6 225 100.0
BolC1t04285H Brassica oleracea HOM05D001038 ORTHO05D032341 2.0e-89 332.8 175 94.9
BcaC09g49043 Brassica carinata HOM05D003421 ORTHO05D032341 3.2e-66 255.8 165 80.6
A02p37020 Brassica napus HOM05D001038 ORTHO05D000395 9.3e-50 201.1 189 61.9
BcaB06g26021 Brassica carinata HOM05D001038 ORTHO05D000395 5.9e-36 155.2 370 34.9
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 3.9e-32 142.5 370 33.5
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 2.5e-31 139.8 353 33.1
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 9.7e-31 137.9 370 33.0
A09p34780 Brassica napus HOM05D001038 ORTHO05D000395 8.2e-30 134.8 384 31.0
C06p06920 Brassica napus HOM05D001038 ORTHO05D000395 4.1e-29 132.5 189 47.1
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 9.0e-29 131.3 384 31.0
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 9.0e-29 131.3 384 31.0
BraA10t43452Z Brassica rapa HOM05D001038 ORTHO05D019929 2.5e-26 123.2 384 29.4
BraA05t21706Z Brassica rapa HOM05D001038 ORTHO05D019929 5.5e-26 122.1 372 29.3
C07p21850 Brassica napus HOM05D001038 ORTHO05D019929 2.7e-25 119.8 372 28.8
BolC7t42716H Brassica oleracea HOM05D001038 ORTHO05D019929 6.1e-25 118.6 372 28.8
C01p21260 Brassica napus HOM05D001038 ORTHO05D000395 1.0e-24 117.9 195 43.6
C02p24050 Brassica napus HOM05D001038 ORTHO05D000395 6.7e-24 115.2 188 41.5
A02p12560 Brassica napus HOM05D001038 ORTHO05D019929 5.7e-23 112.1 372 28.5
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 3.1e-21 106.3 390 27.9
BraA01t02230Z Brassica rapa HOM05D001038 ORTHO05D000395 5.3e-21 105.5 175 43.4
A05p27890 Brassica napus HOM05D005627 ORTHO05D028293 1.5e-20 104.0 189 40.7
BraA06t25336Z Brassica rapa HOM05D001038 ORTHO05D028293 3.4e-20 102.8 189 41.3
BcaB03g16620 Brassica carinata HOM05D001038 ORTHO05D000395 2.9e-19 99.8 315 32.1
A10p07420 Brassica napus HOM05D001038 ORTHO05D000395 2.5e-18 96.7 59 78.0
A05p28250 Brassica napus HOM05D001038 ORTHO05D019929 3.2e-18 96.3 177 38.4
A07p02760 Brassica napus HOM05D005627 ORTHO05D028293 4.2e-18 95.9 189 39.7
BraA07t28076Z Brassica rapa HOM05D001038 ORTHO05D028293 4.2e-18 95.9 189 39.7
BcaC06g34914 Brassica carinata HOM05D001038 ORTHO05D019929 3.6e-17 92.8 177 37.3
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-16 91.3 59 71.2
BraSC36t46061Z Brassica rapa HOM05D001038 ORTHO05D000395 6.7e-16 88.6 48 83.3
BraA05t21309Z Brassica rapa HOM05D001038 ORTHO05D000395 1.1e-15 87.8 107 47.7
BraA07t28816Z Brassica rapa HOM05D001038 ORTHO05D000395 1.5e-15 87.4 48 81.2
BraA09t36747Z Brassica rapa HOM05D001038 ORTHO05D000395 1.1e-13 81.3 63 65.1
BraA04t17267Z Brassica rapa HOM05D001038 ORTHO05D014932 5.3e-13 79.0 213 34.3
BcaB01g01303 Brassica carinata HOM05D001038 ORTHO05D000395 9.1e-13 78.2 353 25.8
BolC6t36138H Brassica oleracea HOM05D001038 ORTHO05D014932 5.9e-12 75.5 256 31.2
BraA02t08689Z Brassica rapa HOM05D001038 ORTHO05D010763 3.8e-11 72.8 43 86.0
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 4.2e-10 69.3 62 53.2
C06p03930 Brassica napus HOM05D001038 ORTHO05D000395 7.2e-10 68.6 62 51.6
BcaC04g21093 Brassica carinata HOM05D001038 ORTHO05D000395 2.7e-09 66.6 59 54.2
BraA05t20300Z Brassica rapa HOM05D001038 ORTHO05D000395 6.1e-09 65.5 53 56.6
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 8.0e-09 65.1 103 40.8
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-08 64.7 62 54.8
BcaB05g25087 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-08 64.7 62 54.8
C03p52030 Brassica napus HOM05D001038 ORTHO05D000395 1.0e-08 64.7 72 45.8
BolC3t17485H Brassica oleracea HOM05D001038 ORTHO05D000395 1.0e-08 64.7 72 45.8
BolC3t18949H Brassica oleracea HOM05D001038 ORTHO05D000395 1.0e-08 64.7 59 52.5
BcaB06g26982 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-08 64.3 62 54.8
BcaB02g11159 Brassica carinata HOM05D001038 ORTHO05D000395 1.8e-08 63.9 364 25.0
C09p35780 Brassica napus HOM05D001038 ORTHO05D000395 1.8e-08 63.9 53 58.5
BolC9t56412H Brassica oleracea HOM05D001038 ORTHO05D000395 1.8e-08 63.9 53 58.5
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 2.3e-08 63.5 383 24.3
BolC3t19681H Brassica oleracea HOM05D001038 ORTHO05D000395 2.3e-08 63.5 59 50.8
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 4.0e-08 62.8 103 39.8
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 4.0e-08 62.8 65 47.7
A09p28390 Brassica napus HOM05D001038 ORTHO05D000395 4.0e-08 62.8 53 56.6
BcaC06g35484 Brassica carinata HOM05D001038 ORTHO05D000395 5.2e-08 62.4 160 35.0
BcaB08g34782 Brassica carinata HOM05D001038 ORTHO05D000395 6.7e-08 62.0 59 52.5
BolC7t41626H Brassica oleracea HOM05D001038 ORTHO05D014932 6.7e-08 62.0 150 36.0
BolC7t42043H Brassica oleracea HOM05D001038 ORTHO05D000395 6.7e-08 62.0 160 35.0
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 8.8e-08 61.6 59 55.9
BcaB04g17277 Brassica carinata HOM05D001038 ORTHO05D014932 8.8e-08 61.6 150 36.0
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-07 61.2 62 50.0
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 1.1e-07 61.2 192 32.3
BcaB02g10843 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-07 60.8 62 48.4
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-07 60.8 59 49.2
C06p10570 Brassica napus HOM05D001038 ORTHO05D014932 1.5e-07 60.8 150 35.3
BcaB03g15871 Brassica carinata HOM05D001038 ORTHO05D027789 2.0e-07 60.5 59 50.8
BcaB03g16061 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-07 60.5 62 46.8
BcaB06g28131 Brassica carinata HOM05D001038 ORTHO05D000395 2.6e-07 60.1 62 46.8
C03p74230 Brassica napus HOM05D001038 ORTHO05D000395 2.6e-07 60.1 52 55.8
BraA03t13820Z Brassica rapa HOM05D001038 ORTHO05D000395 2.6e-07 60.1 56 53.6
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 9.7e-07 58.2 83 41.0
BcaC05g26744 Brassica carinata HOM05D001038 ORTHO05D000395 9.7e-07 58.2 62 46.8
C09p39690 Brassica napus HOM05D001038 ORTHO05D000395 1.3e-06 57.8 53 50.9
BolC9t56849H Brassica oleracea HOM05D001038 ORTHO05D000395 1.3e-06 57.8 53 50.9
BraA05t20013Z Brassica rapa HOM05D001038 ORTHO05D000395 1.3e-06 57.8 53 50.9
BcaB03g16260 Brassica carinata HOM05D001038 ORTHO05D019962 1.7e-06 57.4 106 34.0
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 2.2e-06 57.0 83 39.8
A06p10190 Brassica napus HOM05D001038 ORTHO05D014932 2.2e-06 57.0 160 33.1
A10p07430 Brassica napus HOM05D001038 ORTHO05D042212 2.2e-06 57.0 121 36.4
A01p01820 Brassica napus HOM05D001038 ORTHO05D000395 3.7e-06 56.2 59 47.5
A01p25970 Brassica napus HOM05D001038 ORTHO05D027789 3.7e-06 56.2 53 54.7
BraA06t24710Z Brassica rapa HOM05D001038 ORTHO05D000395 3.7e-06 56.2 59 47.5
C09p42070 Brassica napus HOM05D001038 ORTHO05D021947 4.8e-06 55.8 65 41.5
BraA02t08907Z Brassica rapa HOM05D001038 ORTHO05D000395 4.8e-06 55.8 65 49.2
BraA04t16494Z Brassica rapa HOM05D001038 ORTHO05D021947 4.8e-06 55.8 54 55.6
BcaB05g23512 Brassica carinata HOM05D001038 ORTHO05D000395 6.3e-06 55.5 53 50.9
C09p12410 Brassica napus HOM05D001038 ORTHO05D014953 6.3e-06 55.5 59 50.8
BolC7t41684H Brassica oleracea HOM05D001038 ORTHO05D010763 6.3e-06 55.5 74 43.2
BcaC04g20563 Brassica carinata HOM05D001038 ORTHO05D021947 8.2e-06 55.1 59 45.8


User provided reference genes

Program Settings