Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p39770 Brassica napus HOM05D001285 ORTHO05D000199 6.7e-130 467.6 285 100.0
BcaC05g30530 Brassica carinata HOM05D001285 ORTHO05D000199 1.3e-120 436.8 277 94.9
BraA09t38468Z Brassica rapa HOM05D001285 ORTHO05D000199 5.9e-118 427.9 289 86.9
BolC5t32604H Brassica oleracea HOM05D001285 ORTHO05D000199 4.0e-114 415.2 286 92.3
BcaC05g27865 Brassica carinata HOM05D001285 ORTHO05D000199 7.8e-110 401.0 293 82.9
BcaNung03065 Brassica carinata HOM05D001285 ORTHO05D000199 7.8e-110 401.0 293 82.9
C05p38640 Brassica napus HOM05D001285 ORTHO05D000199 9.5e-84 314.3 278 75.9
C04p20750 Brassica napus HOM05D001285 ORTHO05D000199 1.9e-79 300.1 281 60.5
BcaC05g25966 Brassica carinata HOM05D001285 ORTHO05D000199 2.6e-65 253.1 290 53.1
BcaC02g11078 Brassica carinata HOM05D001285 ORTHO05D000199 9.9e-65 251.1 276 54.0
BolC3t14898H Brassica oleracea HOM05D001285 ORTHO05D000199 9.9e-65 251.1 187 87.2
BolC4t23605H Brassica oleracea HOM05D001285 ORTHO05D000199 1.7e-64 250.4 244 59.0
BolC5t30619H Brassica oleracea HOM05D001285 ORTHO05D000199 3.1e-58 229.6 290 50.0
C05p19190 Brassica napus HOM05D001285 ORTHO05D000199 4.0e-58 229.2 287 49.8
C02p37580 Brassica napus HOM05D001285 ORTHO05D015508 5.8e-57 225.3 302 46.7
BcaC08g44187 Brassica carinata HOM05D001285 ORTHO05D000199 4.2e-55 219.2 290 47.9
C06p15920 Brassica napus HOM05D001285 ORTHO05D000199 1.3e-53 214.2 273 48.0
C03p25070 Brassica napus HOM05D001285 ORTHO05D017687 2.0e-49 200.3 162 84.0
A03p39280 Brassica napus HOM05D001285 ORTHO05D000199 4.5e-41 172.6 171 59.1
BcaNung01892 Brassica carinata HOM05D003576 ORTHO05D000199 1.8e-34 150.6 118 67.8
Sp1g37620 Schrenkiella parvula HOM05D001285 ORTHO05D000199 6.5e-32 142.1 275 38.9
BraA03t13079Z Brassica rapa HOM05D001285 ORTHO05D018768 3.8e-24 116.3 133 54.1
A07p07280 Brassica napus HOM05D000073 ORTHO05D000199 3.2e-23 113.2 275 30.9
BcaC03g15380 Brassica carinata HOM05D001285 ORTHO05D000199 9.4e-23 111.7 303 32.3
C03p03120 Brassica napus HOM05D001285 ORTHO05D000199 3.6e-22 109.8 143 44.1
BolC9t57745H Brassica oleracea HOM05D001285 ORTHO05D000199 1.0e-21 108.2 288 31.6
BcaB04g17928 Brassica carinata HOM05D001285 ORTHO05D000199 1.4e-21 107.8 306 27.8
BraA10t42948Z Brassica rapa HOM05D001285 ORTHO05D000199 1.8e-21 107.5 285 33.0
BcaC07g41747 Brassica carinata HOM05D001285 ORTHO05D000199 8.8e-21 105.1 308 29.2
A07p09780 Brassica napus HOM05D001285 ORTHO05D000199 2.0e-20 104.0 308 29.2
SpUn0003_0010 Schrenkiella parvula HOM05D001285 ORTHO05D017687 2.0e-20 104.0 187 39.6
BcaB03g16504 Brassica carinata HOM05D001285 ORTHO05D000199 5.7e-20 102.4 297 29.0
BcaC01g00776 Brassica carinata HOM05D001285 ORTHO05D000199 5.7e-20 102.4 315 28.6
BcaC02g10464 Brassica carinata HOM05D001285 ORTHO05D000199 5.7e-20 102.4 294 29.6
BcaC04g20925 Brassica carinata HOM05D001285 ORTHO05D000199 5.7e-20 102.4 309 28.8
BolC9t56617H Brassica oleracea HOM05D001285 ORTHO05D000199 1.3e-19 101.3 309 28.5
BcaC06g34326 Brassica carinata HOM05D001285 ORTHO05D000199 1.7e-19 100.9 310 29.4
C07p30320 Brassica napus HOM05D001285 ORTHO05D000199 1.7e-19 100.9 308 29.5
BraA05t21432Z Brassica rapa HOM05D001285 ORTHO05D000199 1.7e-19 100.9 251 33.1
A10p07020 Brassica napus HOM05D001285 ORTHO05D000199 6.3e-19 99.0 294 29.6
C09p37850 Brassica napus HOM05D001285 ORTHO05D000199 1.1e-18 98.2 241 30.3
SpUn1586_0010 Schrenkiella parvula HOM05D001285 ORTHO05D000199 1.1e-18 98.2 59 81.4
BraA02t08671Z Brassica rapa HOM05D001285 ORTHO05D000199 1.8e-18 97.4 299 28.8
BolC2t07252H Brassica oleracea HOM05D001285 ORTHO05D000199 2.4e-18 97.1 284 29.2
BolC2t10459H Brassica oleracea HOM05D001285 ORTHO05D000199 2.4e-18 97.1 242 33.1
BraA03t13037Z Brassica rapa HOM05D001285 ORTHO05D000199 4.1e-18 96.3 299 28.4
BcaB08g35036 Brassica carinata HOM05D001285 ORTHO05D000199 7.0e-18 95.5 297 30.6
BcaC07g41709 Brassica carinata HOM05D001285 ORTHO05D000199 2.6e-17 93.6 301 27.2
BcaB03g16262 Brassica carinata HOM05D001285 ORTHO05D000199 1.0e-16 91.7 298 27.9
BraA07t28518Z Brassica rapa HOM05D001285 ORTHO05D000199 1.0e-16 91.7 229 31.4
Sp5g20050 Schrenkiella parvula HOM05D001285 ORTHO05D000199 2.2e-16 90.5 143 44.8
BcaC03g17060 Brassica carinata HOM05D001285 ORTHO05D000199 5.0e-16 89.4 292 29.5
BcaC05g27108 Brassica carinata HOM05D001285 ORTHO05D000199 5.0e-16 89.4 298 26.5
BcaC08g43423 Brassica carinata HOM05D001285 ORTHO05D000199 1.5e-15 87.8 243 32.9
C09p65970 Brassica napus HOM05D001285 ORTHO05D000199 1.5e-15 87.8 299 27.8
BcaB01g01002 Brassica carinata HOM05D001285 ORTHO05D000199 1.9e-15 87.4 314 29.0
BcaC08g44579 Brassica carinata HOM05D001285 ORTHO05D000199 1.9e-15 87.4 295 28.5
BolC6t35851H Brassica oleracea HOM05D001285 ORTHO05D000199 4.2e-15 86.3 306 32.0
BcaB01g00219 Brassica carinata HOM05D001285 ORTHO05D000199 5.5e-15 85.9 307 29.0
BcaB03g15494 Brassica carinata HOM05D001285 ORTHO05D000199 7.2e-15 85.5 178 38.2
BcaC03g17776 Brassica carinata HOM05D001285 ORTHO05D000199 9.4e-15 85.1 269 30.9
A09p24270 Brassica napus HOM05D001285 ORTHO05D018706 9.4e-15 85.1 241 32.4
C02p29930 Brassica napus HOM05D001285 ORTHO05D000199 1.2e-14 84.7 294 30.6
BcaB02g11283 Brassica carinata HOM05D001285 ORTHO05D000199 6.1e-14 82.4 237 31.2
BcaC03g14913 Brassica carinata HOM05D001285 ORTHO05D000199 6.1e-14 82.4 299 28.4
BolC2t11860H Brassica oleracea HOM05D001285 ORTHO05D000199 1.0e-13 81.6 313 27.8
BcaB06g25750 Brassica carinata HOM05D001285 ORTHO05D000199 3.0e-13 80.1 333 24.9
BcaC05g28112 Brassica carinata HOM05D001285 ORTHO05D000199 4.0e-13 79.7 298 26.2
A06p22000 Brassica napus HOM05D001285 ORTHO05D000199 4.0e-13 79.7 261 29.9
C02p41800 Brassica napus HOM05D001285 ORTHO05D000199 6.8e-13 79.0 313 28.4
BraA01t01846Z Brassica rapa HOM05D001285 ORTHO05D000199 1.5e-12 77.8 298 26.2
A02p36800 Brassica napus HOM05D001285 ORTHO05D000199 2.6e-12 77.0 274 28.1
BcaC08g43217 Brassica carinata HOM05D001285 ORTHO05D000199 4.4e-12 76.3 302 25.5
BcaC04g19281 Brassica carinata HOM05D001285 ORTHO05D000199 5.7e-12 75.9 278 28.1
A02p21070 Brassica napus HOM05D001285 ORTHO05D021762 1.3e-11 74.7 310 24.8
BolC9t59420H Brassica oleracea HOM05D001285 ORTHO05D000199 1.3e-11 74.7 274 28.1
BraSC41t46221Z Brassica rapa HOM05D001285 ORTHO05D000199 1.3e-11 74.7 302 25.5
BcaB03g16401 Brassica carinata HOM05D001285 ORTHO05D000199 2.2e-11 73.9 295 26.8
A09p31290 Brassica napus HOM05D001285 ORTHO05D000199 2.2e-11 73.9 293 27.0
A09p14520 Brassica napus HOM05D001285 ORTHO05D000024 3.7e-11 73.2 112 39.3
C02p57920 Brassica napus HOM05D001285 ORTHO05D000199 6.3e-11 72.4 110 38.2
BolC7t42881H Brassica oleracea HOM05D001285 ORTHO05D000199 1.8e-10 70.9 142 36.6
BcaC06g30937 Brassica carinata HOM05D001285 ORTHO05D000199 3.1e-10 70.1 329 24.6
BcaC02g11260 Brassica carinata HOM05D000152 ORTHO05D001046 5.3e-10 69.3 137 34.3
BcaC03g15031 Brassica carinata HOM05D001285 ORTHO05D000199 5.3e-10 69.3 287 24.4
C02p23920 Brassica napus HOM05D001285 ORTHO05D000199 7.0e-10 68.9 110 36.4
BraA06t25595Z Brassica rapa HOM05D001285 ORTHO05D000199 7.0e-10 68.9 150 32.7
BolC1t02406H Brassica oleracea HOM05D001285 ORTHO05D032651 2.7e-09 67.0 93 41.9
Carub.0004s0691 Capsella rubella HOM05D001285 ORTHO05D000199 4.5e-09 66.2 250 30.0
C02p25810 Brassica napus HOM05D001285 ORTHO05D000199 2.9e-08 63.5 109 33.9
Thhalv10027106m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 5.0e-08 62.8 172 30.8
BcaB03g15497 Brassica carinata HOM05D001285 ORTHO05D000199 6.5e-08 62.4 282 27.7
Thhalv10005449m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 6.5e-08 62.4 175 29.7
BcaB06g28698 Brassica carinata HOM05D001285 ORTHO05D000199 1.5e-07 61.2 240 27.9
Thhalv10015545m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.9e-07 60.8 259 25.5
Thhalv10003101m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.5e-07 60.5 171 30.4
Thhalv10021997m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.5e-07 60.5 193 28.5
BcaB08g35301 Brassica carinata HOM05D001285 ORTHO05D000199 4.2e-07 59.7 58 46.6
Thhalv10005571m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 5.5e-07 59.3 169 30.2
Thhalv10015902m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 5.5e-07 59.3 175 29.1
Thhalv10003114m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 9.4e-07 58.5 171 28.7
AL1G65960 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.2e-06 58.2 287 26.8
Thhalv10002824m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.6e-06 57.8 261 24.1
AT4G08430 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 2.1e-06 57.4 282 26.2
Thhalv10015990m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.7e-06 57.0 170 28.2
AT5G28235 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 3.6e-06 56.6 311 23.8
AT5G45570 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 3.6e-06 56.6 283 24.7
Thhalv10021955m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 4.7e-06 56.2 170 27.6
A10p10700 Brassica napus HOM05D001285 ORTHO05D000199 6.1e-06 55.8 55 45.5
Thhalv10009813m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 6.1e-06 55.8 168 29.8
Thhalv10029261m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 6.1e-06 55.8 178 29.8
CARHR116190 Cardamine hirsuta HOM05D001285 ORTHO05D000199 8.0e-06 55.5 59 50.8


User provided reference genes

Program Settings