Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p33040 Brassica napus HOM05D001285 ORTHO05D000199 2.5e-98 362.1 178 100.0
BcaB07g33410 Brassica carinata HOM05D001285 ORTHO05D000199 3.1e-72 275.4 174 77.6
BcaC09g49778 Brassica carinata HOM05D001285 ORTHO05D017506 1.1e-69 266.9 150 87.3
BcaB06g26759 Brassica carinata HOM05D001285 ORTHO05D000199 9.6e-66 253.8 177 73.4
BolC2t10065H Brassica oleracea HOM05D001285 ORTHO05D000199 2.4e-64 249.2 176 72.7
A02p27370 Brassica napus HOM05D001285 ORTHO05D000199 3.1e-64 248.8 150 81.3
BcaC02g10994 Brassica carinata HOM05D001285 ORTHO05D000199 1.7e-62 243.0 177 70.6
BcaB07g33409 Brassica carinata HOM05D001285 ORTHO05D000199 6.0e-60 234.6 177 67.2
BcaC03g16251 Brassica carinata HOM05D001285 ORTHO05D000199 2.5e-58 229.2 168 69.6
BcaB02g11542 Brassica carinata HOM05D001285 ORTHO05D000199 2.3e-51 206.1 127 78.7
BraA02t07765Z Brassica rapa HOM05D001285 ORTHO05D000199 5.6e-50 201.4 150 68.0
BcaB02g11543 Brassica carinata HOM05D001285 ORTHO05D000199 2.1e-49 199.5 126 73.0
BcaB02g11091 Brassica carinata HOM05D001285 ORTHO05D000199 9.9e-47 190.7 114 78.9
BcaC02g10995 Brassica carinata HOM05D001285 ORTHO05D000199 5.5e-45 184.9 177 59.9
C01p33030 Brassica napus HOM05D001285 ORTHO05D000199 2.1e-44 183.0 94 93.6
BcaB05g23429 Brassica carinata HOM05D001285 ORTHO05D000199 5.1e-43 178.3 174 54.6
BcaB01g01138 Brassica carinata HOM05D001285 ORTHO05D000199 1.9e-42 176.4 139 63.3
BraA05t21191Z Brassica rapa HOM05D001285 ORTHO05D000199 5.6e-42 174.9 164 59.1
C02p42390 Brassica napus HOM05D001285 ORTHO05D039223 7.9e-36 154.5 112 69.6
C04p22370 Brassica napus HOM05D001379 ORTHO05D000199 1.8e-35 153.3 87 83.9
BcaB04g17409 Brassica carinata HOM05D001285 ORTHO05D000199 2.3e-35 152.9 86 82.6
BcaB06g26823 Brassica carinata HOM05D001285 ORTHO05D000199 5.7e-34 148.3 86 80.2
BcaC03g16409 Brassica carinata HOM05D001285 ORTHO05D039223 6.9e-32 141.4 91 76.9
BcaB08g35296 Brassica carinata HOM05D001285 ORTHO05D000199 2.5e-26 122.9 84 75.0
BcaB05g23430 Brassica carinata HOM05D001285 ORTHO05D000199 5.7e-26 121.7 78 74.4
BcaB07g32962 Brassica carinata HOM05D001285 ORTHO05D000199 1.4e-21 107.1 86 60.5
BcaB07g32960 Brassica carinata HOM05D001285 ORTHO05D000199 5.5e-21 105.1 83 60.2
BcaB05g23483 Brassica carinata HOM05D001285 ORTHO05D017506 1.0e-19 100.9 82 57.3
Aa31csc1523G10 Aethionema arabicum HOM05D001285 ORTHO05D000199 2.3e-19 99.8 172 35.5
C06p17040 Brassica napus HOM05D000471 ORTHO05D024295 7.4e-18 94.7 125 39.2
CARHR254680 Cardamine hirsuta HOM05D001285 ORTHO05D013516 7.4e-18 94.7 178 33.1
BcaNung05688 Brassica carinata HOM05D001285 ORTHO05D000199 2.8e-17 92.8 83 62.7
Thhalv10022509m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 6.3e-17 91.7 137 36.5
Aa31LG6G7610 Aethionema arabicum HOM05D001285 ORTHO05D000199 8.2e-17 91.3 160 33.1
Carub.0001s3503 Capsella rubella HOM05D001285 ORTHO05D000199 1.8e-16 90.1 135 35.6
Carub.0008s2148 Capsella rubella HOM05D000471 ORTHO05D000199 1.8e-16 90.1 135 35.6
Aa31sc168G10 Aethionema arabicum HOM05D000471 ORTHO05D000199 9.1e-16 87.8 177 31.6
BolC5t32887H Brassica oleracea HOM05D000471 ORTHO05D000199 7.7e-15 84.7 123 39.0
Aa31LG8G11990 Aethionema arabicum HOM05D001285 ORTHO05D000199 1.0e-14 84.3 175 29.7
Thhalv10000549m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.3e-14 84.0 183 27.9
C09p27730 Brassica napus HOM05D000471 ORTHO05D000199 2.9e-14 82.8 182 33.5
BolC9t54977H Brassica oleracea HOM05D000471 ORTHO05D000199 2.9e-14 82.8 123 39.0
Thhalv10017847m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.9e-14 82.8 183 27.3
BolC5t32511H Brassica oleracea HOM05D000471 ORTHO05D000199 3.8e-14 82.4 123 38.2
Aa31LG11G8470 Aethionema arabicum HOM05D001285 ORTHO05D000199 5.0e-14 82.0 135 36.3
BolC3t19089H Brassica oleracea HOM05D000471 ORTHO05D000199 5.0e-14 82.0 125 33.6
BolC9t56468H Brassica oleracea HOM05D000471 ORTHO05D000199 5.0e-14 82.0 125 35.2
BolC5t32942H Brassica oleracea HOM05D000471 ORTHO05D000199 6.5e-14 81.6 130 36.9
BolC8t48158H Brassica oleracea HOM05D000471 ORTHO05D000199 8.5e-14 81.3 125 35.2
BraA04t16632Z Brassica rapa HOM05D000471 ORTHO05D000199 8.5e-14 81.3 129 36.4
BolC6t35529H Brassica oleracea HOM05D000471 ORTHO05D000199 1.1e-13 80.9 167 32.3
C09p09790 Brassica napus HOM05D000471 ORTHO05D000199 1.4e-13 80.5 128 37.5
C08p08800 Brassica napus HOM05D000471 ORTHO05D000199 1.9e-13 80.1 128 37.5
BolC1t02994H Brassica oleracea HOM05D000471 ORTHO05D000199 1.9e-13 80.1 125 36.0
BolC6t36870H Brassica oleracea HOM05D000471 ORTHO05D000199 1.9e-13 80.1 172 32.0
Sp6g10920 Schrenkiella parvula HOM05D000471 ORTHO05D000199 1.9e-13 80.1 123 34.1
C06p16640 Brassica napus HOM05D000471 ORTHO05D000199 2.5e-13 79.7 128 37.5
BraSC36t46070Z Brassica rapa HOM05D000471 ORTHO05D000199 2.5e-13 79.7 172 32.6
C03p66080 Brassica napus HOM05D000471 ORTHO05D000199 3.2e-13 79.3 128 37.5
C04p30610 Brassica napus HOM05D000471 ORTHO05D000199 3.2e-13 79.3 128 37.5
C05p17420 Brassica napus HOM05D001285 ORTHO05D000199 3.2e-13 79.3 98 41.8
C05p33730 Brassica napus HOM05D000471 ORTHO05D000199 3.2e-13 79.3 128 37.5
C06p05070 Brassica napus HOM05D000471 ORTHO05D000199 4.2e-13 79.0 128 36.7
BolC7t41823H Brassica oleracea HOM05D000471 ORTHO05D000199 4.2e-13 79.0 125 34.4
C02p47380 Brassica napus HOM05D000471 ORTHO05D000199 7.2e-13 78.2 122 39.3
BolC2t10781H Brassica oleracea HOM05D000471 ORTHO05D000199 7.2e-13 78.2 122 39.3
Thhalv10002160m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 7.2e-13 78.2 118 33.1
Thhalv10023860m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 7.2e-13 78.2 130 30.8
A06p22860 Brassica napus HOM05D000471 ORTHO05D000199 9.4e-13 77.8 123 35.8
BraSC35t46011Z Brassica rapa HOM05D000471 ORTHO05D000199 1.6e-12 77.0 128 36.7
BolC8t46987H Brassica oleracea HOM05D000471 ORTHO05D000199 2.1e-12 76.6 125 35.2
BraA02t07702Z Brassica rapa HOM05D000471 ORTHO05D000199 2.1e-12 76.6 125 32.8
Thhalv10012293m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.1e-12 76.6 183 26.2
Thhalv10029463m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.7e-12 76.3 182 25.8
Carub.0002s0992 Capsella rubella HOM05D010384 ORTHO05D013516 3.6e-12 75.9 124 33.1
Thhalv10003021m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 3.6e-12 75.9 130 30.8
Thhalv10012223m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 3.6e-12 75.9 183 26.2
Thhalv10023127m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 3.6e-12 75.9 118 32.2
C06p09110 Brassica napus HOM05D000471 ORTHO05D000199 4.7e-12 75.5 130 35.4
BolC2t11172H Brassica oleracea HOM05D000471 ORTHO05D000199 1.0e-11 74.3 167 30.5
Thhalv10019606m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.0e-11 74.3 121 30.6
Thhalv10019787m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.0e-11 74.3 182 24.2
Thhalv10028194m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.0e-11 74.3 183 25.7
BolC9t55313H Brassica oleracea HOM05D000471 ORTHO05D000199 1.4e-11 73.9 123 36.6
Thhalv10012042m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.8e-11 73.6 117 30.8
BolC8t47965H Brassica oleracea HOM05D000471 ORTHO05D000199 2.3e-11 73.2 177 29.4
A02p24110 Brassica napus HOM05D001285 ORTHO05D000199 3.0e-11 72.8 184 27.2
BolC1t03649H Brassica oleracea HOM05D000471 ORTHO05D000199 3.0e-11 72.8 124 33.1
BraA05t21209Z Brassica rapa HOM05D000471 ORTHO05D000199 5.2e-11 72.0 166 30.1
Aa31sc154G10 Aethionema arabicum HOM05D000471 ORTHO05D000199 6.7e-11 71.6 124 29.0
C09p52520 Brassica napus HOM05D000471 ORTHO05D000199 6.7e-11 71.6 128 35.2
BolC9t58118H Brassica oleracea HOM05D000471 ORTHO05D000199 6.7e-11 71.6 128 35.2
BolC7t40553H Brassica oleracea HOM05D000471 ORTHO05D000199 1.1e-10 70.9 81 48.1
Thhalv10022967m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.1e-10 70.9 117 33.3
Sp6g12000 Schrenkiella parvula HOM05D000471 ORTHO05D000199 1.1e-10 70.9 121 35.5
BcaC03g17060 Brassica carinata HOM05D001285 ORTHO05D000199 1.5e-10 70.5 172 27.3
C02p49780 Brassica napus HOM05D001285 ORTHO05D000199 1.5e-10 70.5 172 27.3
Thhalv10028199m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.5e-10 70.5 181 25.4
BraA05t21432Z Brassica rapa HOM05D001285 ORTHO05D000199 2.0e-10 70.1 169 26.0
THA.LOC104815450 Tarenaya hassleriana HOM05D000675 ORTHO05D000395 2.6e-10 69.7 139 29.5
BolC2t10459H Brassica oleracea HOM05D001285 ORTHO05D000199 3.3e-10 69.3 169 26.0
BolC6t38315H Brassica oleracea HOM05D000471 ORTHO05D000199 3.3e-10 69.3 124 33.1
AT5G45570 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 4.4e-10 68.9 186 30.1
BcaNung03065 Brassica carinata HOM05D001285 ORTHO05D000199 4.4e-10 68.9 152 28.9
BcaC08g43423 Brassica carinata HOM05D001285 ORTHO05D000199 5.7e-10 68.6 183 25.7
BraSC41t46221Z Brassica rapa HOM05D001285 ORTHO05D000199 7.4e-10 68.2 177 27.1
Thhalv10002307m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 7.4e-10 68.2 108 31.5
Thhalv10029334m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 7.4e-10 68.2 180 25.0
THA.LOC104815448 Tarenaya hassleriana HOM05D000977 ORTHO05D001094 7.4e-10 68.2 167 26.9
BcaC04g20925 Brassica carinata HOM05D001285 ORTHO05D000199 9.7e-10 67.8 194 27.3
C05p32520 Brassica napus HOM05D000471 ORTHO05D000199 9.7e-10 67.8 102 39.2
C09p23700 Brassica napus HOM05D000471 ORTHO05D000199 9.7e-10 67.8 120 32.5
C02p43170 Brassica napus HOM05D000471 ORTHO05D000199 1.3e-09 67.4 116 33.6
C09p37840 Brassica napus HOM05D001285 ORTHO05D000199 1.3e-09 67.4 145 28.3
BolC1t01861H Brassica oleracea HOM05D000471 ORTHO05D000199 1.3e-09 67.4 127 33.9
Thhalv10005449m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.3e-09 67.4 202 30.2
BolC9t57745H Brassica oleracea HOM05D001285 ORTHO05D000199 2.2e-09 66.6 137 29.2
BraA06t24592Z Brassica rapa HOM05D001285 ORTHO05D000199 2.2e-09 66.6 176 26.7
Sp1g30760 Schrenkiella parvula HOM05D000471 ORTHO05D000199 2.2e-09 66.6 123 34.1
BcaC05g27865 Brassica carinata HOM05D001285 ORTHO05D000199 2.8e-09 66.2 152 28.3
BcaC05g30530 Brassica carinata HOM05D001285 ORTHO05D000199 2.8e-09 66.2 152 28.3
A01p19020 Brassica napus HOM05D001285 ORTHO05D000199 2.8e-09 66.2 189 27.5
A09p19790 Brassica napus HOM05D000471 ORTHO05D000199 2.8e-09 66.2 77 46.8
C05p38640 Brassica napus HOM05D001285 ORTHO05D000199 2.8e-09 66.2 152 28.3
BraA09t38468Z Brassica rapa HOM05D001285 ORTHO05D000199 2.8e-09 66.2 152 28.3
Thhalv10021997m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.8e-09 66.2 153 31.4
BolC3t18089H Brassica oleracea HOM05D001285 ORTHO05D000199 3.7e-09 65.9 172 27.3
BolC5t32454H Brassica oleracea HOM05D000471 ORTHO05D000199 3.7e-09 65.9 81 40.7
Thhalv10029454m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 8.2e-09 64.7 191 23.0
BolC9t55686H Brassica oleracea HOM05D000471 ORTHO05D000199 1.1e-08 64.3 81 40.7
AT5G28810 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 1.4e-08 63.9 186 28.5
BcaC02g11078 Brassica carinata HOM05D001285 ORTHO05D000199 1.4e-08 63.9 150 29.3
C01p34400 Brassica napus HOM05D000471 ORTHO05D000199 1.8e-08 63.5 113 31.9
BolC1t03410H Brassica oleracea HOM05D000471 ORTHO05D000199 1.8e-08 63.5 113 31.9
BcaC03g14394 Brassica carinata HOM05D000471 ORTHO05D000199 2.4e-08 63.2 92 41.3
C05p35620 Brassica napus HOM05D000471 ORTHO05D000199 3.1e-08 62.8 81 39.5
Thhalv10009813m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 3.1e-08 62.8 133 28.6
BcaC08g44259 Brassica carinata HOM05D000471 ORTHO05D000199 4.1e-08 62.4 81 43.2
BolC2t11101H Brassica oleracea HOM05D000471 ORTHO05D000199 4.1e-08 62.4 81 43.2
Thhalv10015545m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 4.1e-08 62.4 133 28.6
Sp7g08590 Schrenkiella parvula HOM05D000471 ORTHO05D000199 4.1e-08 62.4 124 30.6
SpUn0135_0030 Schrenkiella parvula HOM05D000471 ORTHO05D000199 4.1e-08 62.4 124 30.6
Thhalv10005571m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 5.3e-08 62.0 133 29.3
BcaB03g16174 Brassica carinata HOM05D001285 ORTHO05D000199 7.0e-08 61.6 48 66.7
A03p39280 Brassica napus HOM05D001285 ORTHO05D000199 7.0e-08 61.6 181 26.0
BolC8t49704H Brassica oleracea HOM05D000471 ORTHO05D000199 7.0e-08 61.6 82 39.0
BraA09t38319Z Brassica rapa HOM05D000471 ORTHO05D000199 7.0e-08 61.6 81 44.4
BcaB03g16262 Brassica carinata HOM05D001285 ORTHO05D000199 9.1e-08 61.2 182 23.1
C02p43440 Brassica napus HOM05D000471 ORTHO05D000199 9.1e-08 61.2 82 43.9
BraA01t01846Z Brassica rapa HOM05D001285 ORTHO05D000199 9.1e-08 61.2 179 26.8
Aa31sc119G80 Aethionema arabicum HOM05D001285 ORTHO05D000199 1.2e-07 60.8 79 43.0
BolC5t31893H Brassica oleracea HOM05D000471 ORTHO05D000199 1.2e-07 60.8 82 37.8
Thhalv10012089m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.2e-07 60.8 109 30.3
SpUn0008_0040 Schrenkiella parvula HOM05D000471 ORTHO05D011337 1.2e-07 60.8 132 28.8
BolC1t00982H Brassica oleracea HOM05D000471 ORTHO05D000199 1.6e-07 60.5 86 40.7
BolC3t18881H Brassica oleracea HOM05D000471 ORTHO05D000199 1.6e-07 60.5 122 33.6
Sp3g28640 Schrenkiella parvula HOM05D000471 ORTHO05D000199 1.6e-07 60.5 136 27.9
Aa31LG10G6700 Aethionema arabicum HOM05D001285 ORTHO05D000199 2.0e-07 60.1 78 43.6
Aa31LG3G1850 Aethionema arabicum HOM05D001285 ORTHO05D000199 2.0e-07 60.1 78 43.6
Aa31LG5G20540 Aethionema arabicum HOM05D001285 ORTHO05D000199 2.0e-07 60.1 78 43.6
Aa31LG6G5080 Aethionema arabicum HOM05D001285 ORTHO05D000199 2.0e-07 60.1 78 43.6
Aa31sc86G90 Aethionema arabicum HOM05D001285 ORTHO05D000199 2.0e-07 60.1 78 43.6
A08p03050 Brassica napus HOM05D001285 ORTHO05D000199 2.0e-07 60.1 91 34.1
C03p03110 Brassica napus HOM05D001285 ORTHO05D000199 2.6e-07 59.7 135 28.1
BolC5t30742H Brassica oleracea HOM05D000471 ORTHO05D000199 2.6e-07 59.7 81 38.3
Thhalv10015287m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.6e-07 59.7 121 29.8
C02p37580 Brassica napus HOM05D001285 ORTHO05D015508 3.5e-07 59.3 134 28.4
BolC6t35851H Brassica oleracea HOM05D001285 ORTHO05D000199 3.5e-07 59.3 91 34.1
Thhalv10003035m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 4.5e-07 58.9 179 26.8
Thhalv10023984m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 4.5e-07 58.9 82 36.6
Aa31LG5G23320 Aethionema arabicum HOM05D001285 ORTHO05D000199 1.0e-06 57.8 74 43.2
AT4G08430 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 1.0e-06 57.8 92 37.0
Thhalv10029150m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.0e-06 57.8 80 35.0
Sp7g08630 Schrenkiella parvula HOM05D000471 ORTHO05D000199 1.0e-06 57.8 72 41.7
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 1.3e-06 57.4 188 27.7
C04p60190 Brassica napus HOM05D001285 ORTHO05D000199 1.3e-06 57.4 80 36.2
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 1.3e-06 57.4 188 27.7
Thhalv10028061m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.3e-06 57.4 81 37.0
C09p27440 Brassica napus HOM05D000471 ORTHO05D000199 1.7e-06 57.0 81 40.7
BolC2t09359H Brassica oleracea HOM05D000471 ORTHO05D000199 1.7e-06 57.0 54 51.9
Thhalv10029224m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.2e-06 56.6 80 33.8
Thhalv10029244m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.2e-06 56.6 80 33.8
Aa31LG8G12130 Aethionema arabicum HOM05D001285 ORTHO05D000199 2.9e-06 56.2 77 42.9
BolC7t43513H Brassica oleracea HOM05D000471 ORTHO05D000199 2.9e-06 56.2 84 36.9
BolC9t58182H Brassica oleracea HOM05D000471 ORTHO05D000199 2.9e-06 56.2 81 37.0
Thhalv10003373m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.9e-06 56.2 110 30.9
Thhalv10029306m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.9e-06 56.2 78 38.5
BcaB03g16175 Brassica carinata HOM05D014762 ORTHO05D006770 3.8e-06 55.8 49 57.1
Thhalv10015771m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 5.0e-06 55.5 111 30.6
C02p29930 Brassica napus HOM05D001285 ORTHO05D000199 8.5e-06 54.7 76 38.2
Thhalv10017747m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 8.5e-06 54.7 81 35.8


User provided reference genes

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