Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p30110 Brassica napus HOM05D001239 ORTHO05D023908 6.6e-191 670.6 360 100.0
BolC1t02956H Brassica oleracea HOM05D001239 ORTHO05D023908 1.1e-116 424.1 238 100.0
BcaB04g18066 Brassica carinata HOM05D001239 ORTHO05D023908 8.7e-42 175.3 161 57.8
C09p42620 Brassica napus HOM05D001239 ORTHO05D011709 2.5e-28 130.6 165 53.9
BolC5t30244H Brassica oleracea HOM05D001239 ORTHO05D011709 8.8e-26 122.1 230 43.5
BcaC01g03871 Brassica carinata HOM05D001239 ORTHO05D011709 3.3e-25 120.2 161 47.8
BcaB05g23185 Brassica carinata HOM05D001239 ORTHO05D023908 4.4e-25 119.8 167 43.1
BraA09t38239Z Brassica rapa HOM05D014076 ORTHO05D021903 1.7e-21 107.8 177 46.3
BolC2t10713H Brassica oleracea HOM05D001239 ORTHO05D011709 4.2e-20 103.2 186 41.9
C03p49130 Brassica napus HOM05D014076 ORTHO05D024532 1.6e-19 101.3 188 42.6
C09p49690 Brassica napus HOM05D001239 ORTHO05D011709 2.3e-18 97.4 186 41.9
BcaB07g33550 Brassica carinata HOM05D001239 ORTHO05D011709 4.0e-18 96.7 178 44.9
BcaC01g05559 Brassica carinata HOM05D001239 ORTHO05D011709 3.3e-17 93.6 150 44.7
BraA01t01837Z Brassica rapa HOM05D014076 ORTHO05D021903 5.7e-17 92.8 184 41.3
A06p35270 Brassica napus HOM05D000591 ORTHO05D000579 7.5e-17 92.4 75 68.0
BcaC09g49677 Brassica carinata HOM05D000496 ORTHO05D011709 4.8e-16 89.7 153 42.5
C03p49160 Brassica napus HOM05D014076 ORTHO05D024532 1.1e-15 88.6 76 65.8
C05p11830 Brassica napus HOM05D001239 ORTHO05D033080 1.1e-15 88.6 184 39.1
BolC3t17197H Brassica oleracea HOM05D014076 ORTHO05D024532 1.8e-15 87.8 101 55.4
A01p18960 Brassica napus HOM05D014076 ORTHO05D021903 1.2e-14 85.1 110 54.5
C01p34040 Brassica napus HOM05D001239 ORTHO05D011709 1.6e-14 84.7 186 37.6
BraA04t17766Z Brassica rapa HOM05D001239 ORTHO05D024427 3.5e-14 83.6 80 56.2
BcaB04g18103 Brassica carinata HOM05D001239 ORTHO05D023908 7.7e-14 82.4 92 53.3
BcaC06g36045 Brassica carinata HOM05D000496 ORTHO05D000411 7.7e-14 82.4 88 52.3
BcaC05g25304 Brassica carinata HOM05D000508 ORTHO05D000371 1.3e-13 81.6 151 43.7
C07p04310 Brassica napus HOM05D001239 ORTHO05D011709 2.9e-13 80.5 153 38.6
BcaB03g11924 Brassica carinata HOM05D001239 ORTHO05D011709 3.8e-13 80.1 68 61.8
C04p30980 Brassica napus HOM05D001035 ORTHO05D021752 3.8e-13 80.1 125 48.8
BcaC01g01482 Brassica carinata HOM05D009238 ORTHO05D021611 5.0e-13 79.7 177 36.7
BcaC02g09195 Brassica carinata HOM05D001239 ORTHO05D031919 5.0e-13 79.7 176 38.6
BcaC04g19167 Brassica carinata HOM05D000496 ORTHO05D000411 6.5e-13 79.3 141 40.4
BcaC07g40131 Brassica carinata HOM05D014076 ORTHO05D000006 2.5e-12 77.4 238 36.6
BcaC04g22862 Brassica carinata HOM05D000496 ORTHO05D000411 5.5e-12 76.3 85 51.8
C07p05770 Brassica napus HOM05D001239 ORTHO05D011709 7.2e-12 75.9 53 77.4
BcaB07g30912 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-11 75.1 231 33.8
BolC1t05632H Brassica oleracea HOM05D014076 ORTHO05D021903 1.6e-11 74.7 154 42.9
BolC4t26715H Brassica oleracea HOM05D001239 ORTHO05D011709 1.6e-11 74.7 176 37.5
BolC7t40747H Brassica oleracea HOM05D001239 ORTHO05D027739 2.7e-11 73.9 185 37.8
A05p24750 Brassica napus HOM05D002138 ORTHO05D002106 3.6e-11 73.6 59 59.3
BcaB03g15929 Brassica carinata HOM05D000496 ORTHO05D000411 4.7e-11 73.2 129 43.4
BcaC05g27311 Brassica carinata HOM05D001239 ORTHO05D011709 4.7e-11 73.2 150 38.7
CARHR154060 Cardamine hirsuta HOM05D001239 ORTHO05D011709 4.7e-11 73.2 93 49.5
C08p14340 Brassica napus HOM05D001239 ORTHO05D024532 6.1e-11 72.8 126 42.9
BcaB07g32141 Brassica carinata HOM05D000496 ORTHO05D000411 8.0e-11 72.4 192 38.0
BolC2t08478H Brassica oleracea HOM05D001239 ORTHO05D024427 8.0e-11 72.4 179 33.5
BcaC02g11658 Brassica carinata HOM05D014076 ORTHO05D021903 1.0e-10 72.0 250 36.8
C08p07070 Brassica napus HOM05D001239 ORTHO05D024427 1.0e-10 72.0 81 56.8
BraA06t26451Z Brassica rapa HOM05D001307 ORTHO05D001158 3.0e-10 70.5 88 50.0
BcaC01g02173 Brassica carinata HOM05D001239 ORTHO05D017499 4.0e-10 70.1 225 33.3
A03p63670 Brassica napus HOM05D001239 ORTHO05D011709 4.0e-10 70.1 61 59.0
BolC8t47551H Brassica oleracea HOM05D001239 ORTHO05D024427 4.0e-10 70.1 81 55.6
BraA03t15438Z Brassica rapa HOM05D001239 ORTHO05D011709 4.0e-10 70.1 61 59.0
BcaB01g01785 Brassica carinata HOM05D000496 ORTHO05D000925 5.2e-10 69.7 243 33.3
BolC6t37073H Brassica oleracea HOM05D001239 ORTHO05D017499 5.2e-10 69.7 79 53.2
BcaC08g44422 Brassica carinata HOM05D001239 ORTHO05D017499 6.8e-10 69.3 79 53.2
C03p67910 Brassica napus HOM05D001239 ORTHO05D017499 8.8e-10 68.9 220 34.1
C04p33720 Brassica napus HOM05D031458 ORTHO05D027524 8.8e-10 68.9 161 35.4
C05p23240 Brassica napus HOM05D009238 ORTHO05D021611 8.8e-10 68.9 150 38.7
BolC4t24940H Brassica oleracea HOM05D031458 ORTHO05D027524 8.8e-10 68.9 161 35.4
C05p15940 Brassica napus HOM05D009238 ORTHO05D021611 1.5e-09 68.2 61 60.7
BraA09t38523Z Brassica rapa HOM05D027742 ORTHO05D027054 1.5e-09 68.2 204 34.3
BcaC03g14187 Brassica carinata HOM05D001239 ORTHO05D011709 2.6e-09 67.4 66 56.1
C04p52150 Brassica napus HOM05D027742 ORTHO05D027054 3.4e-09 67.0 171 35.1
BcaC01g06924 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-09 66.6 62 58.1
BcaB01g02634 Brassica carinata HOM05D000496 ORTHO05D000411 5.7e-09 66.2 77 49.4
BcaC02g09623 Brassica carinata HOM05D002743 ORTHO05D002895 5.7e-09 66.2 109 39.4
BolC2t08494H Brassica oleracea HOM05D009238 ORTHO05D012489 5.7e-09 66.2 51 62.7
BolC4t26060H Brassica oleracea HOM05D009238 ORTHO05D012489 5.7e-09 66.2 109 39.4
BraA03t12194Z Brassica rapa HOM05D009238 ORTHO05D012489 5.7e-09 66.2 66 56.1
BcaC03g18002 Brassica carinata HOM05D016815 ORTHO05D020093 7.5e-09 65.9 115 38.3
BcaC04g22514 Brassica carinata HOM05D001239 ORTHO05D027739 7.5e-09 65.9 237 33.8
C06p18600 Brassica napus HOM05D001239 ORTHO05D017499 9.8e-09 65.5 186 33.3
BolC8t49935H Brassica oleracea HOM05D001239 ORTHO05D011709 9.8e-09 65.5 173 34.7
BcaC06g33595 Brassica carinata HOM05D000003 ORTHO05D000006 1.3e-08 65.1 80 48.8
BolC1t03373H Brassica oleracea HOM05D001239 ORTHO05D011709 1.3e-08 65.1 44 72.7
A10p08920 Brassica napus HOM05D001239 ORTHO05D011709 1.7e-08 64.7 50 68.0
BolC6t35474H Brassica oleracea HOM05D016295 ORTHO05D017554 1.7e-08 64.7 150 34.7
BolC6t38778H Brassica oleracea HOM05D009238 ORTHO05D012489 1.7e-08 64.7 161 34.2
BcaB04g19331 Brassica carinata HOM05D033284 ORTHO05D032654 2.2e-08 64.3 46 65.2
BraA08t34457Z Brassica rapa HOM05D007244 ORTHO05D040510 2.2e-08 64.3 138 35.5
BcaC08g43076 Brassica carinata HOM05D016295 ORTHO05D017554 2.8e-08 63.9 147 34.7
C02p60610 Brassica napus HOM05D016815 ORTHO05D020093 3.7e-08 63.5 49 65.3
C03p31480 Brassica napus HOM05D009238 ORTHO05D021611 3.7e-08 63.5 61 57.4
BolC5t29932H Brassica oleracea HOM05D001239 ORTHO05D033080 3.7e-08 63.5 156 35.9
BraA03t13842Z Brassica rapa HOM05D009238 ORTHO05D020093 3.7e-08 63.5 62 53.2
BcaC09g50328 Brassica carinata HOM05D000018 ORTHO05D008577 6.3e-08 62.8 124 33.1
C02p57570 Brassica napus HOM05D001239 ORTHO05D011709 6.3e-08 62.8 120 40.0
C04p63540 Brassica napus HOM05D007244 ORTHO05D040510 6.3e-08 62.8 138 34.8
C07p03520 Brassica napus HOM05D001239 ORTHO05D027739 6.3e-08 62.8 233 33.5
BcaB06g26119 Brassica carinata HOM05D001239 ORTHO05D011709 1.4e-07 61.6 234 29.5
A10p16820 Brassica napus HOM05D016815 ORTHO05D012489 1.4e-07 61.6 47 61.7
C01p26600 Brassica napus HOM05D011670 ORTHO05D031889 1.4e-07 61.6 94 36.2
C06p11850 Brassica napus HOM05D009238 ORTHO05D012489 1.4e-07 61.6 45 62.2
BcaC02g08196 Brassica carinata HOM05D009238 ORTHO05D011709 1.8e-07 61.2 64 54.7
BcaC02g10000 Brassica carinata HOM05D016295 ORTHO05D017554 2.4e-07 60.8 142 36.6
C06p15150 Brassica napus HOM05D016815 ORTHO05D020093 2.4e-07 60.8 138 32.6
BolC6t36689H Brassica oleracea HOM05D016815 ORTHO05D020093 2.4e-07 60.8 138 32.6
C03p47070 Brassica napus HOM05D016815 ORTHO05D020093 3.1e-07 60.5 49 57.1
BraA02t08674Z Brassica rapa HOM05D009238 ORTHO05D012489 3.1e-07 60.5 45 60.0
A07p33680 Brassica napus HOM05D000496 ORTHO05D000411 5.4e-07 59.7 196 32.1
C09p64410 Brassica napus HOM05D007244 ORTHO05D000411 5.4e-07 59.7 244 28.7
A02p36830 Brassica napus HOM05D009238 ORTHO05D012489 7.0e-07 59.3 44 61.4
BraA10t43824Z Brassica rapa HOM05D001239 ORTHO05D000925 7.0e-07 59.3 221 30.3
BNapus_Darmor_BZH_scaffold_167p00080 Brassica napus HOM05D000496 ORTHO05D000411 9.1e-07 58.9 69 46.4
BolC2t07633H Brassica oleracea HOM05D009238 ORTHO05D019868 9.1e-07 58.9 48 62.5
BcaC03g17089 Brassica carinata HOM05D025306 ORTHO05D011709 1.2e-06 58.5 72 48.6
BcaB04g17452 Brassica carinata HOM05D009238 ORTHO05D019868 1.6e-06 58.2 137 39.4
BcaC05g28718 Brassica carinata HOM05D007244 ORTHO05D011635 1.6e-06 58.2 52 55.8
BraA06t25448Z Brassica rapa HOM05D001239 ORTHO05D017499 2.0e-06 57.8 167 34.1
BcaB01g02065 Brassica carinata HOM05D031458 ORTHO05D027524 2.7e-06 57.4 162 35.2
BcaC06g30752 Brassica carinata HOM05D007244 ORTHO05D039411 2.7e-06 57.4 86 44.2
BolC7t44466H Brassica oleracea HOM05D007244 ORTHO05D039411 2.7e-06 57.4 86 44.2
BraA06t27694Z Brassica rapa HOM05D007244 ORTHO05D027097 2.7e-06 57.4 112 37.5
BolC1t02602H Brassica oleracea HOM05D011670 ORTHO05D031889 4.5e-06 56.6 81 40.7
BolC9t57963H Brassica oleracea HOM05D011670 ORTHO05D020093 4.5e-06 56.6 54 53.7
A10p14470 Brassica napus HOM05D011670 ORTHO05D027274 5.9e-06 56.2 49 53.1
BraA10t43537Z Brassica rapa HOM05D011670 ORTHO05D027274 5.9e-06 56.2 49 53.1
A04p06620 Brassica napus HOM05D009238 ORTHO05D012489 7.7e-06 55.8 57 57.9


User provided reference genes

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