Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p25750 Brassica napus HOM05D008309 ORTHO05D010308 7.9e-180 633.6 315 100.0
BolC1t02525H Brassica oleracea HOM05D008309 ORTHO05D010308 2.1e-148 529.3 292 92.5
BolC7t46146H Brassica oleracea HOM05D008309 ORTHO05D010308 5.7e-130 468.0 263 88.6
C07p56660 Brassica napus HOM05D008309 ORTHO05D010308 1.4e-128 463.4 263 88.6
BraA04t17824Z Brassica rapa HOM05D008309 ORTHO05D010308 9.1e-120 434.1 259 86.5
BraA06t25453Z Brassica rapa HOM05D008309 ORTHO05D010308 1.7e-118 429.9 351 67.0
C04p50470 Brassica napus HOM05D008309 ORTHO05D010308 1.4e-112 410.2 353 64.0
A09p53580 Brassica napus HOM05D008309 ORTHO05D010308 1.3e-110 403.7 286 70.6
BolC2t10136H Brassica oleracea HOM05D008309 ORTHO05D010308 2.4e-104 382.9 312 68.3
BraA10t44443Z Brassica rapa HOM05D008309 ORTHO05D010308 8.6e-102 374.4 351 57.5
A04p20790 Brassica napus HOM05D008309 ORTHO05D010308 6.2e-100 368.2 320 59.7
C02p41170 Brassica napus HOM05D008309 ORTHO05D010308 6.4e-97 358.2 399 55.4
BolC8t50055H Brassica oleracea HOM05D008309 ORTHO05D010308 1.2e-95 354.0 351 54.1
BraA04t17652Z Brassica rapa HOM05D008309 ORTHO05D010308 1.2e-95 354.0 351 54.1
BolC3t19893H Brassica oleracea HOM05D008309 ORTHO05D010308 2.7e-95 352.8 348 54.6
C03p39230 Brassica napus HOM05D008309 ORTHO05D010308 1.0e-86 324.3 219 72.6
A09p47040 Brassica napus HOM05D008309 ORTHO05D010308 3.0e-86 322.8 300 61.0
AT1G40087 Arabidopsis thaliana HOM05D008309 ORTHO05D010308 6.2e-84 315.1 352 49.1
C02p19790 Brassica napus HOM05D008309 ORTHO05D010308 3.2e-80 302.8 275 57.8
BolC4t26644H Brassica oleracea HOM05D008309 ORTHO05D010308 2.7e-79 299.7 295 58.6
BraA09t40169Z Brassica rapa HOM05D008309 ORTHO05D010308 1.1e-75 287.7 285 58.2
A03p63400 Brassica napus HOM05D008309 ORTHO05D010308 7.6e-74 281.6 275 58.9
BolC2t08113H Brassica oleracea HOM05D008309 ORTHO05D010308 2.4e-72 276.6 296 52.0
C05p49520 Brassica napus HOM05D008309 ORTHO05D010308 2.1e-71 273.5 299 51.8
AT3G30200 Arabidopsis thaliana HOM05D008309 ORTHO05D010308 1.4e-59 234.2 351 41.0
BolC4t25321H Brassica oleracea HOM05D008309 ORTHO05D010308 5.5e-56 222.2 244 52.0
C04p37540 Brassica napus HOM05D000855 ORTHO05D002321 1.0e-54 218.0 243 52.7
A09p31570 Brassica napus HOM05D008309 ORTHO05D010308 3.2e-48 196.4 115 79.1
BolC9t56521H Brassica oleracea HOM05D008309 ORTHO05D010308 2.7e-47 193.4 227 52.4
A01p27270 Brassica napus HOM05D008309 ORTHO05D010308 4.1e-43 179.5 212 46.7
BraSC39t46182Z Brassica rapa HOM05D008309 ORTHO05D010308 9.1e-35 151.8 100 71.0
A09p43070 Brassica napus HOM05D008309 ORTHO05D010308 1.2e-34 151.4 123 57.7
BraA01t02998Z Brassica rapa HOM05D008309 ORTHO05D010308 1.1e-29 134.8 253 36.4
C09p36910 Brassica napus HOM05D008309 ORTHO05D010308 7.4e-29 132.1 164 48.2
A01p29020 Brassica napus HOM05D008309 ORTHO05D010308 9.7e-29 131.7 253 36.4
AL1G66070 Arabidopsis lyrata HOM05D000107 ORTHO05D000062 1.4e-24 117.9 250 32.0
C03p71000 Brassica napus HOM05D008309 ORTHO05D010308 4.7e-23 112.8 59 84.7
BraA01t02865Z Brassica rapa HOM05D008309 ORTHO05D010308 6.1e-23 112.5 110 50.0
BraA05t22683Z Brassica rapa HOM05D008309 ORTHO05D000062 6.1e-23 112.5 110 50.0
C01p31730 Brassica napus HOM05D001350 ORTHO05D001091 1.4e-22 111.3 114 48.2
BcaC06g31080 Brassica carinata HOM05D008309 ORTHO05D010308 3.0e-22 110.2 159 45.9
BolC1t03108H Brassica oleracea HOM05D001350 ORTHO05D001091 3.0e-22 110.2 180 36.1
BolC3t19382H Brassica oleracea HOM05D008309 ORTHO05D010308 3.9e-22 109.8 58 82.8
C04p48940 Brassica napus HOM05D008309 ORTHO05D010308 2.0e-21 107.5 140 47.9
BolC4t26475H Brassica oleracea HOM05D008309 ORTHO05D010308 2.0e-21 107.5 97 61.9
BcaC06g32085 Brassica carinata HOM05D008309 ORTHO05D010308 2.6e-21 107.1 67 71.6
A05p38920 Brassica napus HOM05D008309 ORTHO05D010308 6.3e-20 102.4 107 53.3
A09p31580 Brassica napus HOM05D008309 ORTHO05D010308 9.1e-19 98.6 161 39.8
C01p31680 Brassica napus HOM05D008309 ORTHO05D000062 1.2e-18 98.2 75 60.0
BolSC30t60633H Brassica oleracea HOM05D008309 ORTHO05D010308 4.2e-16 89.7 162 41.4
AL1G63190 Arabidopsis lyrata HOM05D008309 ORTHO05D010308 9.1e-11 72.0 81 42.0
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.0e-09 68.6 96 36.5
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 1.0e-09 68.6 198 26.3
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 1.3e-09 68.2 106 34.0
AUR62041429 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.2e-09 67.4 180 26.1
AUR62040089 Chenopodium quinoa HOM05D001309 ORTHO05D000385 6.5e-09 65.9 107 32.7
AUR62041672 Chenopodium quinoa HOM05D001309 ORTHO05D000385 6.5e-09 65.9 107 32.7
COL.COLO4_05115 Corchorus olitorius HOM05D001309 ORTHO05D004434 6.5e-09 65.9 192 27.1
DCAR_001756 Daucus carota HOM05D001309 ORTHO05D000385 6.5e-09 65.9 96 36.5
Nitab4.5_0004891g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-08 65.1 149 28.2
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 1.5e-08 64.7 124 31.5
Gohir.D10G156350 Gossypium hirsutum HOM05D001309 ORTHO05D000385 1.5e-08 64.7 114 29.8
Peaxi162Scf02065g00005 Petunia axillaris HOM05D002954 ORTHO05D010308 1.5e-08 64.7 177 28.8
AL8G10020 Arabidopsis lyrata HOM05D000087 ORTHO05D005735 3.2e-08 63.5 52 51.9
COL.COLO4_07670 Corchorus olitorius HOM05D001309 ORTHO05D000385 3.2e-08 63.5 165 25.5
VMungo0647G1703 Vigna mungo HOM05D002954 ORTHO05D000002 3.2e-08 63.5 152 28.3
Nitab4.5_0002373g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.2e-08 63.2 122 32.0
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 7.2e-08 62.4 104 36.5
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 9.4e-08 62.0 92 33.7
Gohir.D12G043100 Gossypium hirsutum HOM05D001309 ORTHO05D000385 9.4e-08 62.0 159 25.8
Gorai.008G045300 Gossypium raimondii HOM05D001309 ORTHO05D005970 9.4e-08 62.0 159 25.8
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 9.4e-08 62.0 90 37.8
Cpa.g.c35072.1 Carica papaya HOM05D001309 ORTHO05D000385 1.2e-07 61.6 110 32.7
COL.COLO4_15543 Corchorus olitorius HOM05D001309 ORTHO05D000385 1.2e-07 61.6 121 30.6
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 1.2e-07 61.6 138 31.2
Manes.07G023800 Manihot esculenta HOM05D001309 ORTHO05D005970 1.6e-07 61.2 101 32.7
Nitab4.5_0001076g0100 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.6e-07 61.2 126 29.4
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 2.1e-07 60.8 92 32.6
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 2.1e-07 60.8 139 27.3
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 2.7e-07 60.5 82 35.4
HanXRQChr03g0064971 Helianthus annuus HOM05D001309 ORTHO05D005970 2.7e-07 60.5 151 28.5
Nitab4.5_0000817g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.7e-07 60.5 122 32.0
Hund14852 Selenicereus undatus HOM05D009900 ORTHO05D011543 2.7e-07 60.5 210 25.7
C01p42640 Brassica napus HOM05D008309 ORTHO05D010308 3.6e-07 60.1 114 34.2
Gohir.A12G044100 Gossypium hirsutum HOM05D001309 ORTHO05D005970 3.6e-07 60.1 95 31.6
Manes.10G118800 Manihot esculenta HOM05D001309 ORTHO05D000385 3.6e-07 60.1 99 33.3
Phvul.L002237 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 4.7e-07 59.7 141 29.1
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 4.7e-07 59.7 96 32.3
AL1G48750 Arabidopsis lyrata HOM05D039413 ORTHO05D010308 6.1e-07 59.3 143 30.8
CSS0004008 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.1e-07 59.3 124 28.2
CSS0018077 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.1e-07 59.3 124 28.2
CSS0030327 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.1e-07 59.3 124 28.2
BolC8t48093H Brassica oleracea HOM05D008309 ORTHO05D010308 8.0e-07 58.9 74 44.6
CSS0016301 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 8.0e-07 58.9 124 28.2
Carub.0001s3238 Capsella rubella HOM05D039413 ORTHO05D010308 8.0e-07 58.9 87 36.8
Gohir.A01G183600 Gossypium hirsutum HOM05D001309 ORTHO05D005970 8.0e-07 58.9 82 35.4
Os04g0610000 Oryza sativa ssp. japonica HOM05D001309 ORTHO05D000385 8.0e-07 58.9 116 26.7
CANSAT21G2150 Cannabis sativa HOM05D001309 ORTHO05D000385 1.0e-06 58.5 129 29.5
Gohir.D04G003250 Gossypium hirsutum HOM05D001309 ORTHO05D000385 1.0e-06 58.5 82 35.4
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.0e-06 58.5 116 28.4
Peaxi162Scf01071g00046 Petunia axillaris HOM05D040622 ORTHO05D010308 1.0e-06 58.5 87 33.3
Nn3g20149 Nelumbo nucifera HOM05D001309 ORTHO05D000385 1.4e-06 58.2 176 26.7
arahy.Tifrunner.gnm1.ann1.I134XL Arachis hypogaea HOM05D011000 ORTHO05D003353 1.8e-06 57.8 178 27.5
Nn1g09472 Nelumbo nucifera HOM05D001309 ORTHO05D000385 1.8e-06 57.8 109 29.4
Phvul.L001985 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.8e-06 57.8 94 34.0
arahy.Tifrunner.gnm1.ann1.2IZ9JW Arachis hypogaea HOM05D002954 ORTHO05D003353 2.3e-06 57.4 122 27.0
arahy.Tifrunner.gnm1.ann1.H1PTY0 Arachis hypogaea HOM05D002954 ORTHO05D010308 2.3e-06 57.4 122 27.0
CANSAT11G1463 Cannabis sativa HOM05D001309 ORTHO05D000385 2.3e-06 57.4 129 28.7
Zm00001eb267220 Zea mays HOM05D008576 ORTHO05D000385 2.3e-06 57.4 115 29.6
Carub.0033s0009 Capsella rubella HOM05D039413 ORTHO05D010308 3.0e-06 57.0 87 34.5
FvH4_1g28483 Fragaria vesca HOM05D000539 ORTHO05D000233 4.0e-06 56.6 96 34.4
FvH4_2g21272 Fragaria vesca HOM05D000539 ORTHO05D000233 4.0e-06 56.6 96 34.4
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.0e-06 56.6 131 27.5
MBI19_g33997_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.0e-06 56.6 98 30.6
TPR.G34719 Trifolium pratense HOM05D002954 ORTHO05D000385 4.0e-06 56.6 116 28.4
Atru.chr1.767 Acer truncatum HOM05D001309 ORTHO05D000385 6.8e-06 55.8 180 25.0
C06p11900 Brassica napus HOM05D008309 ORTHO05D010308 6.8e-06 55.8 101 37.6
FvH4_3g14251 Fragaria vesca HOM05D000539 ORTHO05D000233 6.8e-06 55.8 82 37.8
CSS0014937 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 8.8e-06 55.5 123 26.8
FvH4_6g12902 Fragaria vesca HOM05D000539 ORTHO05D000233 8.8e-06 55.5 96 33.3
FvH4_6g17382 Fragaria vesca HOM05D008321 ORTHO05D003768 8.8e-06 55.5 100 33.0
MBI09_g15192_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.8e-06 55.5 98 30.6
Phvul.008G149000 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 8.8e-06 55.5 93 33.3
TWI34G1252 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 8.8e-06 55.5 115 28.7


User provided reference genes

Program Settings