Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p11650 Brassica napus HOM05D026831 ORTHO05D011195 8.4e-147 523.9 302 100.0
BolC2t12207H Brassica oleracea HOM05D002268 ORTHO05D042165 2.6e-63 246.5 120 96.7
C02p10780 Brassica napus HOM05D002268 ORTHO05D042165 9.8e-63 244.6 120 95.8
A10p08570 Brassica napus HOM05D026831 ORTHO05D033435 5.5e-21 105.9 56 94.6
BcaC09g51595 Brassica carinata HOM05D001093 ORTHO05D011195 3.7e-17 93.2 66 72.7
BcaC01g01260 Brassica carinata HOM05D002268 ORTHO05D006937 5.5e-13 79.3 97 48.5
A08p02940 Brassica napus HOM05D002268 ORTHO05D006937 5.5e-13 79.3 97 48.5
C03p89920 Brassica napus HOM05D002268 ORTHO05D006937 5.5e-13 79.3 97 48.5
BolC3t21311H Brassica oleracea HOM05D002268 ORTHO05D006937 5.5e-13 79.3 97 48.5
BraA08t32327Z Brassica rapa HOM05D002268 ORTHO05D006937 5.5e-13 79.3 97 48.5
BcaB02g11231 Brassica carinata HOM05D002268 ORTHO05D006937 3.9e-11 73.2 97 44.3
AL1G59110 Arabidopsis lyrata HOM05D002268 ORTHO05D006937 5.1e-11 72.8 97 45.4
A05p19700 Brassica napus HOM05D002268 ORTHO05D006937 5.1e-11 72.8 97 44.3
Sp1g37990 Schrenkiella parvula HOM05D002268 ORTHO05D006937 6.7e-11 72.4 98 45.9
AT1G51310 Arabidopsis thaliana HOM05D002268 ORTHO05D006937 8.7e-11 72.0 95 45.3
Carub.0001s4017 Capsella rubella HOM05D002268 ORTHO05D006937 8.7e-11 72.0 95 45.3
Thhalv10011432m.g Eutrema salsugineum HOM05D002268 ORTHO05D006937 8.7e-11 72.0 95 45.3
Carub.0008s0647 Capsella rubella HOM05D002268 ORTHO05D006937 1.9e-10 70.9 95 44.2
C05p32860 Brassica napus HOM05D002268 ORTHO05D006937 4.3e-10 69.7 109 42.2
BolC5t32017H Brassica oleracea HOM05D002268 ORTHO05D006937 4.3e-10 69.7 109 42.2
CARHR041380 Cardamine hirsuta HOM05D002268 ORTHO05D006937 4.3e-10 69.7 97 44.3
BcaC03g15887 Brassica carinata HOM05D018170 ORTHO05D011195 7.4e-10 68.9 44 72.7
BcaC06g35419 Brassica carinata HOM05D018170 ORTHO05D000748 9.7e-10 68.6 45 75.6
Aa31LG10G3500 Aethionema arabicum HOM05D002268 ORTHO05D006937 4.8e-09 66.2 95 43.2
BcaC05g27353 Brassica carinata HOM05D002268 ORTHO05D006937 2.0e-07 60.8 87 41.4
QL01p004788 Quercus lobata HOM05D002268 ORTHO05D006937 2.6e-07 60.5 98 39.8
Rhsim01G0191500 Rhododendron simsii HOM05D002268 ORTHO05D006937 2.6e-07 60.5 111 38.7
Psat7g212760 Pisum sativum HOM05D002268 ORTHO05D006937 4.5e-07 59.7 95 38.9
HanXRQChr07g0197481 Helianthus annuus HOM05D002268 ORTHO05D006937 5.9e-07 59.3 106 38.7
MBI04_g17077_MAGBIO Magnolia biondii HOM05D002268 ORTHO05D006937 5.9e-07 59.3 103 37.9
Cpa.g.sc84.62 Carica papaya HOM05D002268 ORTHO05D006937 7.7e-07 58.9 93 40.9
Lj3g0006923 Lotus japonicus HOM05D002268 ORTHO05D006937 7.7e-07 58.9 93 39.8
Ca_11284_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 1.0e-06 58.5 95 38.9
Ca_30227_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 1.0e-06 58.5 95 38.9
Sc16g0011510 Simmondsia chinensis HOM05D002268 ORTHO05D006937 1.0e-06 58.5 95 37.9
MELO3C014598.2 Cucumis melo HOM05D002268 ORTHO05D006937 1.3e-06 58.2 110 38.2
DCAR_000723 Daucus carota HOM05D002268 ORTHO05D006937 1.3e-06 58.2 97 38.1
Gorai.009G073000 Gossypium raimondii HOM05D002268 ORTHO05D006937 1.3e-06 58.2 97 39.2
MD03G1176400 Malus domestica HOM05D002268 ORTHO05D006937 1.3e-06 58.2 120 34.2
vmacro19340 Vaccinium macrocarpon HOM05D002268 ORTHO05D006937 1.3e-06 58.2 101 37.6
Actinidia06337 Actinidia chinensis HOM05D002268 ORTHO05D006937 1.7e-06 57.8 97 38.1
BraA05t20874Z Brassica rapa HOM05D002268 ORTHO05D006937 1.7e-06 57.8 90 40.0
Gohir.A05G069100 Gossypium hirsutum HOM05D002268 ORTHO05D006937 1.7e-06 57.8 97 39.2
Gohir.D05G072000 Gossypium hirsutum HOM05D002268 ORTHO05D006937 1.7e-06 57.8 97 39.2
Lsat_1_v5_gn_2_97721 Lactuca sativa HOM05D002268 ORTHO05D006937 1.7e-06 57.8 99 37.4
TPR.G35035 Trifolium pratense HOM05D002268 ORTHO05D006937 1.7e-06 57.8 104 36.5
ClCG02G023280 Citrullus lanatus HOM05D002268 ORTHO05D006937 2.2e-06 57.4 105 38.1
ECA238G2081 Erigeron canadensis HOM05D002268 ORTHO05D006937 2.2e-06 57.4 106 36.8
Hma1.2p1_0861F.1_g229700 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 2.2e-06 57.4 97 39.2
Lj2A631G13 Lonicera japonica HOM05D002268 ORTHO05D006937 2.2e-06 57.4 104 36.5
CiPaw.14G119300 Carya illinoinensis HOM05D002268 ORTHO05D006937 2.9e-06 57.0 93 39.8
Haze_23130 Corylus avellana HOM05D002268 ORTHO05D006937 2.9e-06 57.0 93 39.8
Migut.N02313 Erythranthe guttata HOM05D002268 ORTHO05D006937 2.9e-06 57.0 102 38.2
Glyma.12G057700 Glycine max HOM05D002268 ORTHO05D006937 2.9e-06 57.0 106 38.7
PGSC0003DMG400003844 Solanum tuberosum HOM05D002268 ORTHO05D006937 2.9e-06 57.0 112 35.7
SGA_v2.0_scaffold42G16104 Striga asiatica HOM05D002268 ORTHO05D006937 2.9e-06 57.0 94 41.5
Nitab4.5_0005819g0070 Nicotiana tabacum HOM05D002268 ORTHO05D006937 3.8e-06 56.6 94 40.4
Ah.04g161910 Amaranthus hybridus HOM05D002268 ORTHO05D006937 5.0e-06 56.2 93 39.8
Cc09_g04150 Coffea canephora HOM05D002268 ORTHO05D006937 5.0e-06 56.2 94 40.4
CsaV3_4G024220 Cucumis sativus L. HOM05D002268 ORTHO05D006937 5.0e-06 56.2 105 37.1
Hma1.2p1_0861F.1_g229710 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 5.0e-06 56.2 94 39.4
Lsat_1_v5_gn_1_117501 Lactuca sativa HOM05D002268 ORTHO05D006937 5.0e-06 56.2 72 45.8
EL10Ac4g10259 Beta vulgaris HOM05D002268 ORTHO05D006937 6.5e-06 55.8 93 39.8
EL10Ac4g10275 Beta vulgaris HOM05D002268 ORTHO05D006937 6.5e-06 55.8 93 39.8
Glyma.11G133500 Glycine max HOM05D002268 ORTHO05D006937 6.5e-06 55.8 102 39.2
MD11G1196700 Malus domestica HOM05D002268 ORTHO05D006937 6.5e-06 55.8 93 37.6
Solyc09g074100.4 Solanum lycopersicum HOM05D002268 ORTHO05D006937 6.5e-06 55.8 94 40.4
Sopen09g028920 Solanum pennellii HOM05D002268 ORTHO05D006937 6.5e-06 55.8 94 40.4
CAN.G956.10 Capsicum annuum HOM05D002268 ORTHO05D006937 8.5e-06 55.5 112 34.8


User provided reference genes

Program Settings