Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p07220 Brassica napus HOM05D005002 ORTHO05D006016 4.9e-117 424.5 212 100.0
BolC1t00713H Brassica oleracea HOM05D005002 ORTHO05D006016 4.9e-117 424.5 212 100.0
BcaC09g51961 Brassica carinata HOM05D005002 ORTHO05D006016 6.9e-71 271.2 135 100.0
AT4G31720 Arabidopsis thaliana HOM05D005002 ORTHO05D006016 1.5e-70 270.0 135 99.3
AL7G20310 Arabidopsis lyrata HOM05D005002 ORTHO05D006016 2.0e-70 269.6 135 98.5
Sp7g29520 Schrenkiella parvula HOM05D005002 ORTHO05D006016 2.0e-70 269.6 135 98.5
BcaNung05179 Brassica carinata HOM05D005002 ORTHO05D006016 4.5e-70 268.5 135 98.5
A01p06560 Brassica napus HOM05D005002 ORTHO05D006016 4.5e-70 268.5 135 98.5
BraA01t00615Z Brassica rapa HOM05D005002 ORTHO05D006016 4.5e-70 268.5 135 98.5
Carub.0007s0884 Capsella rubella HOM05D005002 ORTHO05D006016 2.9e-69 265.8 135 97.0
BraA08t33811Z Brassica rapa HOM05D005002 ORTHO05D006016 6.5e-69 264.6 135 96.3
Thhalv10026546m.g Eutrema salsugineum HOM05D005002 ORTHO05D006016 6.5e-69 264.6 135 96.3
Aa31LG2G18620 Aethionema arabicum HOM05D005002 ORTHO05D006016 7.1e-68 261.2 135 95.6
A08p18490 Brassica napus HOM05D005002 ORTHO05D006016 1.2e-67 260.4 135 94.1
BcaB03g12714 Brassica carinata HOM05D005002 ORTHO05D006016 3.5e-67 258.8 135 94.8
THA.LOC104819944 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 5.3e-63 245.0 137 89.8
BcaC01g01070 Brassica carinata HOM05D005002 ORTHO05D006016 1.5e-62 243.4 123 96.7
C03p87650 Brassica napus HOM05D005002 ORTHO05D006016 1.5e-62 243.4 123 96.7
THA.LOC104803866 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 1.3e-61 240.4 135 88.1
Rhsim07G0172200 Rhododendron simsii HOM05D001416 ORTHO05D005885 2.7e-59 232.6 136 81.6
Duzib168G1293 Durio zibethinus HOM05D005002 ORTHO05D006016 3.5e-59 232.3 137 83.9
Gohir.A05G062833 Gossypium hirsutum HOM05D005002 ORTHO05D006016 4.6e-59 231.9 137 83.9
Gohir.A05G062900 Gossypium hirsutum HOM05D005002 ORTHO05D006016 4.6e-59 231.9 137 83.9
Sed0003546 Sechium edule HOM05D005002 ORTHO05D006016 6.1e-59 231.5 137 82.5
Thecc.09G010700 Theobroma cacao HOM05D005002 ORTHO05D006016 1.0e-58 230.7 137 83.2
Gohir.D05G065400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 1.3e-58 230.3 137 83.2
Gorai.009G066200 Gossypium raimondii HOM05D005002 ORTHO05D006016 1.3e-58 230.3 137 83.2
Gohir.A07G034400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 3.9e-58 228.8 137 82.5
Gohir.D07G038000 Gossypium hirsutum HOM05D005002 ORTHO05D006016 3.9e-58 228.8 137 82.5
Gorai.001G039800 Gossypium raimondii HOM05D005002 ORTHO05D006016 3.9e-58 228.8 137 82.5
CAN.G566.59 Capsicum annuum HOM05D005002 ORTHO05D006016 6.7e-58 228.0 138 81.2
Actinidia03570 Actinidia chinensis HOM05D005002 ORTHO05D006016 1.1e-57 227.3 137 80.3
ClCG08G013890 Citrullus lanatus HOM05D005002 ORTHO05D006016 1.1e-57 227.3 137 83.2
Dinv03972 Davidia involucrata HOM05D005002 ORTHO05D006016 1.5e-57 226.9 137 81.8
Manes.03G005700 Manihot esculenta HOM05D005002 ORTHO05D006016 1.9e-57 226.5 136 83.8
Sed0020410 Sechium edule HOM05D005002 ORTHO05D006016 3.3e-57 225.7 137 81.8
Dinv03977 Davidia involucrata HOM05D005002 ORTHO05D006016 5.7e-57 224.9 137 80.3
PGR044G1228 Punica granatum HOM05D005002 ORTHO05D006016 5.7e-57 224.9 129 86.8
TAR622G0454 Trochodendron aralioides HOM05D005002 ORTHO05D006016 9.7e-57 224.2 165 69.1
Nitab4.5_0001110g0170 Nicotiana tabacum HOM05D005002 ORTHO05D006016 1.3e-56 223.8 159 73.0
vmacro05092 Vaccinium macrocarpon HOM05D005002 ORTHO05D006016 1.3e-56 223.8 138 80.4
GSVIVG01023467001 Vitis vinifera HOM05D005002 ORTHO05D006016 1.3e-56 223.8 137 82.5
CANSAT25G2804 Cannabis sativa HOM05D005002 ORTHO05D006016 1.6e-56 223.4 137 81.8
Glyma.18G054400 Glycine max HOM05D005002 ORTHO05D006016 1.6e-56 223.4 137 81.8
BcaC09g51955 Brassica carinata HOM05D005002 ORTHO05D006016 2.2e-56 223.0 125 90.4
CSS0022428 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 2.2e-56 223.0 137 80.3
CSS0035568 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 2.8e-56 222.6 137 80.3
GSVIVG01023464001 Vitis vinifera HOM05D005002 ORTHO05D006016 2.8e-56 222.6 137 81.0
Phvul.008G002400 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 3.7e-56 222.2 137 81.8
Prupe.1G399400 Prunus persica HOM05D005002 ORTHO05D006016 3.7e-56 222.2 144 80.6
QL01p029339 Quercus lobata HOM05D005002 ORTHO05D006016 3.7e-56 222.2 138 79.0
Lalb_Chr08g0234011 Lupinus albus HOM05D005002 ORTHO05D006016 4.8e-56 221.9 137 81.0
Glyma.11G160400 Glycine max HOM05D005002 ORTHO05D006016 8.2e-56 221.1 137 80.3
Peaxi162Scf00459g00833 Petunia axillaris HOM05D005002 ORTHO05D006016 8.2e-56 221.1 134 80.6
Solyc12g096470.2 Solanum lycopersicum HOM05D005002 ORTHO05D006016 8.2e-56 221.1 139 77.0
Sopen12g032300 Solanum pennellii HOM05D005002 ORTHO05D006016 8.2e-56 221.1 139 77.0
PGSC0003DMG400029278 Solanum tuberosum HOM05D005002 ORTHO05D006016 8.2e-56 221.1 139 77.0
RcHm_v2.0_Chr6g0269591 Rosa chinensis HOM05D005002 ORTHO05D006016 1.1e-55 220.7 142 81.7
Oeu008768.2 Olea europaea HOM05D005002 ORTHO05D006016 1.8e-55 219.9 132 81.8
MD08G1049200 Malus domestica HOM05D005002 ORTHO05D006016 2.4e-55 219.5 138 81.2
VMungo1383G3578 Vigna mungo HOM05D005002 ORTHO05D006016 2.4e-55 219.5 137 80.3
Eucgr.B03202 Eucalyptus grandis HOM05D005002 ORTHO05D006016 3.1e-55 219.2 132 81.8
Lsat_1_v5_gn_6_32161 Lactuca sativa HOM05D005002 ORTHO05D006016 5.3e-55 218.4 137 77.4
EL10Ac2g02432 Beta vulgaris HOM05D005002 ORTHO05D006016 6.9e-55 218.0 132 81.1
Potri.018G013300 Populus trichocarpa HOM05D005002 ORTHO05D006016 9.0e-55 217.6 123 88.6
VMungo1383G2539 Vigna mungo HOM05D005002 ORTHO05D006016 9.0e-55 217.6 137 80.3
Lj1g0025268 Lotus japonicus HOM05D005002 ORTHO05D006016 1.2e-54 217.2 132 82.6
TWI34G0825 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 1.2e-54 217.2 136 81.6
Ciclev10009813m.g Citrus clementina HOM05D005002 ORTHO05D006016 2.0e-54 216.5 148 77.0
Sabra18G0017200 Salix brachista HOM05D005002 ORTHO05D006016 2.0e-54 216.5 123 87.8
FvH4_2g11240 Fragaria vesca HOM05D005002 ORTHO05D006016 3.4e-54 215.7 145 77.2
CSS0010222 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 4.5e-54 215.3 137 78.8
PSO782G1729 Papaver somniferum HOM05D005002 ORTHO05D006016 4.5e-54 215.3 136 77.9
arahy.Tifrunner.gnm1.ann1.1V29TX Arachis hypogaea HOM05D005002 ORTHO05D006016 7.7e-54 214.5 137 79.6
Medtr7g080740 Medicago truncatula HOM05D005002 ORTHO05D006016 7.7e-54 214.5 140 77.9
Cc00_g22050 Coffea canephora HOM05D005002 ORTHO05D006016 1.0e-53 214.2 129 81.4
PSO478G2205 Papaver somniferum HOM05D005002 ORTHO05D006016 1.7e-53 213.4 136 77.2
Lalb_Chr10g0091021 Lupinus albus HOM05D005002 ORTHO05D006016 2.9e-53 212.6 138 79.0
QL02p017669 Quercus lobata HOM05D005002 ORTHO05D006016 1.1e-52 210.7 137 78.1
HanXRQChr14g0453401 Helianthus annuus HOM05D005002 ORTHO05D006016 1.4e-52 210.3 138 73.2
TWI63G0754 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 1.9e-52 209.9 164 69.5
Migut.A00405 Erythranthe guttata HOM05D005002 ORTHO05D006016 2.5e-52 209.5 138 76.1
Psat0s2083g0280 Pisum sativum HOM05D005002 ORTHO05D006016 2.5e-52 209.5 131 77.9
arahy.Tifrunner.gnm1.ann1.JDP7FN Arachis hypogaea HOM05D005002 ORTHO05D006016 3.2e-52 209.1 144 76.4
HanXRQChr07g0195931 Helianthus annuus HOM05D005002 ORTHO05D006016 3.2e-52 209.1 137 73.7
HPP92_000490 Vanilla planifolia HOM05D005002 ORTHO05D006016 3.2e-52 209.1 130 79.2
MSTRG.25811 Avicennia marina HOM05D005002 ORTHO05D006016 9.4e-52 207.6 129 79.1
BolC3t21083H Brassica oleracea HOM05D000888 ORTHO05D000740 9.4e-52 207.6 108 95.4
TPR.G15628 Trifolium pratense HOM05D005002 ORTHO05D006016 1.6e-51 206.8 144 72.9
Nn3g17630 Nelumbo nucifera HOM05D005002 ORTHO05D006016 4.6e-51 205.3 138 72.5
Sc23g0006270 Simmondsia chinensis HOM05D005002 ORTHO05D006016 7.9e-51 204.5 130 76.2
TPR.G12644 Trifolium pratense HOM05D005002 ORTHO05D006016 7.9e-51 204.5 142 74.6
MD15G1045700 Malus domestica HOM05D005002 ORTHO05D006016 1.4e-50 203.8 136 76.5
FAN24G1669 Fragaria x ananassa HOM05D005002 ORTHO05D006016 2.3e-50 203.0 169 67.5
ECA238G2697 Erigeron canadensis HOM05D005002 ORTHO05D006016 3.9e-50 202.2 140 70.7
unitig_92.g28144 Utricularia gibba HOM05D003482 ORTHO05D004194 5.1e-50 201.8 190 57.9
DCAR_020711 Daucus carota HOM05D004285 ORTHO05D006016 8.8e-50 201.1 129 78.3
DCAR_020712 Daucus carota HOM05D005002 ORTHO05D006016 2.0e-49 199.9 128 78.9
Aqoxy7G00066 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 2.5e-49 199.5 123 80.5
Os09g0431500 Oryza sativa ssp. japonica HOM05D005002 ORTHO05D006016 1.7e-48 196.8 127 74.0
BcaC09g51957 Brassica carinata HOM05D005002 ORTHO05D006016 1.8e-47 193.4 140 78.6
RcHm_v2.0_Chr2g0161651 Rosa chinensis HOM05D005002 ORTHO05D006016 1.8e-47 193.4 126 78.6
ATR0691G047 Amborella trichopoda HOM05D005002 ORTHO05D006016 3.1e-47 192.6 131 71.8
Cfa017847 Carpinus fangiana HOM05D005002 ORTHO05D006016 3.1e-47 192.6 135 73.3
Zm00001eb313590 Zea mays HOM05D005002 ORTHO05D006016 3.1e-47 192.6 124 75.8
CDE04G1191 Ceratophyllum demersum HOM05D005002 ORTHO05D006016 4.1e-47 192.2 131 70.2
MELO3C011321.2 Cucumis melo HOM05D005002 ORTHO05D006016 2.9e-45 186.0 115 83.5
Actinidia14152 Actinidia chinensis HOM05D005002 ORTHO05D006016 1.6e-43 180.3 110 80.0
CSS0031521 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 7.9e-43 177.9 110 80.9
Haze_18362 Corylus avellana HOM05D005002 ORTHO05D006016 3.0e-42 176.0 110 81.8
FAN15G1411 Fragaria x ananassa HOM05D000348 ORTHO05D000244 3.9e-42 175.6 106 84.9
Hma1.2p1_0192F.1_g083460 Hydrangea macrophylla HOM05D005002 ORTHO05D006016 6.7e-42 174.9 110 80.0
AUR62020301 Chenopodium quinoa HOM05D005002 ORTHO05D006016 1.1e-41 174.1 112 77.7
AUR62037698 Chenopodium quinoa HOM05D005002 ORTHO05D006016 4.4e-41 172.2 114 78.1
SalBow4G2991 Salvia bowleyana HOM05D005002 ORTHO05D006016 1.4e-39 167.2 111 79.3
Ah.09g224730 Amaranthus hybridus HOM05D005002 ORTHO05D006016 3.1e-39 166.0 145 62.8
Ca_06528_v3 Cicer arietinum L. HOM05D005002 ORTHO05D006016 2.9e-37 159.5 113 74.3
Mapoly0011s0105 Marchantia polymorpha HOM05D005002 ORTHO05D006016 1.9e-36 156.8 125 61.6
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 2.5e-36 156.4 106 70.8
CARHR239610 Cardamine hirsuta HOM05D005002 ORTHO05D006016 3.2e-36 156.0 82 93.9
Pp3c6_16040 Physcomitrium patens HOM05D005002 ORTHO05D006016 7.2e-36 154.8 115 64.3
COL.COLO4_21113 Corchorus olitorius HOM05D005002 ORTHO05D006016 6.1e-35 151.8 112 71.4
unitig_93.g30701 Utricularia gibba HOM05D005002 ORTHO05D006016 9.7e-33 144.4 133 57.9
COL.COLO4_19003 Corchorus olitorius HOM05D005002 ORTHO05D006016 2.8e-32 142.9 85 88.2
Duzib168G1591 Durio zibethinus HOM05D005002 ORTHO05D006016 1.1e-31 141.0 84 86.9
Duzib150G1286 Durio zibethinus HOM05D005002 ORTHO05D006016 3.8e-29 132.5 75 84.0
Lju41A41T35 Lonicera japonica HOM05D005002 ORTHO05D006016 1.1e-28 131.0 181 44.2
Duzib187G1493 Durio zibethinus HOM05D005002 ORTHO05D006016 3.2e-28 129.4 86 80.2
RcHm_v2.0_Chr2g0161711 Rosa chinensis HOM05D005002 ORTHO05D006016 1.2e-27 127.5 84 79.8
MSTRG.9875 Avicennia marina HOM05D005002 ORTHO05D006016 6.1e-27 125.2 84 77.4
SMO141G0065 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 8.0e-27 124.8 120 56.7
Aqoxy7G00833 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 6.8e-26 121.7 75 77.3
CBR_g30254 Chara braunii HOM05D005002 ORTHO05D006016 6.8e-26 121.7 101 56.4
SMO356G0735 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 5.7e-25 118.6 112 49.1
MBI15_g18374_MAGBIO Magnolia biondii HOM05D005002 ORTHO05D006016 1.7e-24 117.1 132 51.5
SGA_v2.0_scaffold193G40677 Striga asiatica HOM05D005002 ORTHO05D006016 2.4e-23 113.2 120 55.0
A01p06550 Brassica napus HOM05D005002 ORTHO05D006016 1.9e-20 103.6 86 65.1
Lalb_Chr08g0233981 Lupinus albus HOM05D005002 ORTHO05D006016 3.2e-20 102.8 65 80.0
Nitab4.5_0000668g0030 Nicotiana tabacum HOM05D005002 ORTHO05D006016 1.6e-19 100.5 64 75.0
CiPaw.15G092700 Carya illinoinensis HOM05D005002 ORTHO05D006016 2.1e-19 100.1 53 84.9
PRCOL_00006189 Prasinoderma coloniale HOM05D005002 ORTHO05D006016 1.4e-18 97.4 125 37.6
Lalb_Chr08g0233961 Lupinus albus HOM05D005002 ORTHO05D006016 1.8e-18 97.1 53 81.1
COL.COLO4_27723 Corchorus olitorius HOM05D005002 ORTHO05D006016 3.7e-16 89.4 52 75.0
FAN27G2219 Fragaria x ananassa HOM05D005002 ORTHO05D006016 3.7e-16 89.4 61 73.8
FAN20G1660 Fragaria x ananassa HOM05D005002 ORTHO05D006016 1.8e-15 87.0 61 68.9
MCO01G145 Micromonas commoda HOM05D005002 ORTHO05D006016 1.8e-15 87.0 107 43.9
QL12p013723 Quercus lobata HOM05D005002 ORTHO05D006016 3.5e-14 82.8 60 76.7
Phvul.009G222000 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 5.9e-14 82.0 77 53.2
SEGI_02469 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 8.6e-13 78.2 62 67.7
EL10Ac5g10893 Beta vulgaris HOM05D005002 ORTHO05D006016 1.5e-12 77.4 45 75.6
Actinidia25736 Actinidia chinensis HOM05D005002 ORTHO05D006016 2.3e-10 70.1 88 48.9
Cre16.g657000 Chlamydomonas reinhardtii HOM05D005002 ORTHO05D006016 6.8e-10 68.6 126 35.7
HanXRQChr14g0435251 Helianthus annuus HOM05D005002 ORTHO05D006016 9.2e-07 58.2 53 58.5


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