Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p06990 Brassica napus HOM05D008873 ORTHO05D005982 1.1e-69 266.5 135 100.0
BcaC09g51982 Brassica carinata HOM05D008873 ORTHO05D005982 6.6e-67 257.3 140 95.7
BolC5t34215H Brassica oleracea HOM05D008873 ORTHO05D005982 2.3e-40 169.1 120 73.3
BcaC05g29270 Brassica carinata HOM05D008873 ORTHO05D005982 4.0e-40 168.3 108 78.7
C05p55490 Brassica napus HOM05D008873 ORTHO05D005982 4.0e-40 168.3 108 78.7
A05p37060 Brassica napus HOM05D008873 ORTHO05D005982 5.2e-40 167.9 108 77.8
BcaB04g21084 Brassica carinata HOM05D008873 ORTHO05D005982 4.1e-37 158.3 108 74.1
BcaB04g21086 Brassica carinata HOM05D008873 ORTHO05D005982 4.1e-37 158.3 108 74.1
Sp3g10530 Schrenkiella parvula HOM05D008873 ORTHO05D005982 1.3e-35 153.3 108 74.1
AL3G23970 Arabidopsis lyrata HOM05D008873 ORTHO05D005982 5.6e-34 147.9 108 72.2
Carub.0003s1168 Capsella rubella HOM05D008873 ORTHO05D005982 1.6e-33 146.4 108 72.2
Thhalv10021314m.g Eutrema salsugineum HOM05D008873 ORTHO05D005982 4.7e-33 144.8 108 70.4
AT3G12320 Arabidopsis thaliana HOM05D008873 ORTHO05D005982 1.8e-32 142.9 108 72.2
CARHR086860 Cardamine hirsuta HOM05D008873 ORTHO05D005982 1.0e-27 127.1 100 70.0
A03p37600 Brassica napus HOM05D008873 ORTHO05D005982 8.7e-27 124.0 112 60.7
BraA03t12914Z Brassica rapa HOM05D008873 ORTHO05D005982 8.7e-27 124.0 112 60.7
BraA05t22503Z Brassica rapa HOM05D008873 ORTHO05D005982 1.6e-25 119.8 98 63.3
BcaC01g04052 Brassica carinata HOM05D008873 ORTHO05D005982 2.4e-24 115.9 112 58.9
C03p45590 Brassica napus HOM05D008873 ORTHO05D005982 2.4e-24 115.9 112 58.9
BolC3t16836H Brassica oleracea HOM05D008873 ORTHO05D005982 2.4e-24 115.9 112 58.9
Aa31LG3G6540 Aethionema arabicum HOM05D008873 ORTHO05D005982 9.9e-23 110.5 114 55.3
Thhalv10014291m.g Eutrema salsugineum HOM05D008873 ORTHO05D005982 4.8e-17 91.7 121 50.4
C09p69120 Brassica napus HOM05D008873 ORTHO05D005982 1.4e-16 90.1 126 44.4
BolC9t59656H Brassica oleracea HOM05D008873 ORTHO05D005982 1.4e-16 90.1 126 44.4
A10p28780 Brassica napus HOM05D008873 ORTHO05D005982 9.0e-16 87.4 125 46.4
Sp6g35890 Schrenkiella parvula HOM05D008873 ORTHO05D005982 1.2e-15 87.0 125 47.2
BraA10t44925Z Brassica rapa HOM05D008873 ORTHO05D005982 1.5e-15 86.7 125 46.4
AL6G17140 Arabidopsis lyrata HOM05D008873 ORTHO05D005982 3.4e-15 85.5 114 51.8
Carub.0006s0591 Capsella rubella HOM05D008873 ORTHO05D005982 9.9e-15 84.0 115 48.7
BcaNung04207 Brassica carinata HOM05D008873 ORTHO05D005982 1.7e-14 83.2 132 40.9
AT5G06980 Arabidopsis thaliana HOM05D008873 ORTHO05D005982 4.9e-14 81.6 114 50.0
BcaB01g05709 Brassica carinata HOM05D008873 ORTHO05D005982 1.1e-13 80.5 103 48.5
BcaC06g32527 Brassica carinata HOM05D008873 ORTHO05D005982 3.2e-13 79.0 125 42.4
THA.LOC104799328 Tarenaya hassleriana HOM05D008873 ORTHO05D005982 1.5e-10 70.1 121 40.5
BolC1t05243H Brassica oleracea HOM05D008873 ORTHO05D005982 3.7e-09 65.5 62 59.7
Aa31sc25G30 Aethionema arabicum HOM05D008873 ORTHO05D005982 8.4e-06 54.3 115 33.0


User provided reference genes

Program Settings