Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p05960 Brassica napus HOM05D000272 ORTHO05D000164 5.1e-165 584.3 296 100.0
BolC1t00574H Brassica oleracea HOM05D000272 ORTHO05D000164 2.7e-150 535.4 270 99.3
BolC1t00575H Brassica oleracea HOM05D000272 ORTHO05D000164 2.7e-145 518.8 260 100.0
A01p05200 Brassica napus HOM05D000272 ORTHO05D000164 9.5e-127 457.2 269 87.0
BraA01t00503Z Brassica rapa HOM05D000272 ORTHO05D000164 3.6e-126 455.3 269 86.6
BolC1t00549H Brassica oleracea HOM05D000272 ORTHO05D000164 4.7e-126 454.9 268 87.3
BcaC09g52096 Brassica carinata HOM05D000272 ORTHO05D000164 6.8e-125 451.1 267 88.8
C01p05690 Brassica napus HOM05D000272 ORTHO05D000164 6.8e-125 451.1 267 88.8
Sp7g30750 Schrenkiella parvula HOM05D000272 ORTHO05D000164 1.9e-114 416.4 288 76.7
Thhalv10025083m.g Eutrema salsugineum HOM05D000272 ORTHO05D000164 4.7e-102 375.2 291 73.2
BolC7t46388H Brassica oleracea HOM05D000272 ORTHO05D000164 2.3e-96 356.3 272 73.5
C07p59450 Brassica napus HOM05D000272 ORTHO05D000164 1.5e-95 353.6 274 73.0
BcaNung02149 Brassica carinata HOM05D000272 ORTHO05D000164 1.1e-93 347.4 269 72.5
A03p61730 Brassica napus HOM05D000272 ORTHO05D000164 1.5e-92 343.6 268 70.9
BraA03t15211Z Brassica rapa HOM05D000272 ORTHO05D000164 9.9e-92 340.9 268 70.9
AT4G32980 Arabidopsis thaliana HOM05D000272 ORTHO05D000164 2.7e-89 332.8 293 66.6
AL7G18710 Arabidopsis lyrata HOM05D000272 ORTHO05D000164 6.0e-89 331.6 295 66.4
CARHR240990 Cardamine hirsuta HOM05D000272 ORTHO05D000164 6.7e-80 301.6 294 63.3
Carub.0007s0750 Capsella rubella HOM05D000272 ORTHO05D000164 1.8e-77 293.5 291 61.2
THA.LOC104803732 Tarenaya hassleriana HOM05D000272 ORTHO05D000164 4.4e-31 139.4 343 39.4
Aa31LG5G9720 Aethionema arabicum HOM05D000272 ORTHO05D000164 7.5e-23 112.1 300 35.7
Sabra18G0049400 Salix brachista HOM05D000272 ORTHO05D000164 3.6e-09 66.6 154 35.1
Hma1.2p1_0482F.1_g162600 Hydrangea macrophylla HOM05D000272 ORTHO05D000164 2.3e-08 63.9 135 34.8
Ciclev10010212m.g Citrus clementina HOM05D000272 ORTHO05D000164 3.0e-08 63.5 162 36.4
Sabra06G0178900 Salix brachista HOM05D000272 ORTHO05D000164 8.9e-08 62.0 169 36.1
Manes.16G079300 Manihot esculenta HOM05D000272 ORTHO05D000164 1.5e-07 61.2 169 36.7
Gorai.001G023100 Gossypium raimondii HOM05D000272 ORTHO05D000164 5.7e-07 59.3 154 36.4
PSO210G7454 Papaver somniferum HOM05D000272 ORTHO05D000164 5.7e-07 59.3 173 31.2
RcHm_v2.0_Chr6g0310681 Rosa chinensis HOM05D000272 ORTHO05D000164 5.7e-07 59.3 302 27.2
Eucgr.C03024 Eucalyptus grandis HOM05D000272 ORTHO05D000164 1.7e-06 57.8 151 39.1
Gohir.D07G022500 Gossypium hirsutum HOM05D000272 ORTHO05D000164 2.9e-06 57.0 155 36.8
QL02p001377 Quercus lobata HOM05D000272 ORTHO05D000164 6.4e-06 55.8 167 31.7
Gohir.A07G022116 Gossypium hirsutum HOM05D000272 ORTHO05D000164 8.3e-06 55.5 154 35.7
Psat6g019760 Pisum sativum HOM05D000272 ORTHO05D000164 8.3e-06 55.5 151 36.4


User provided reference genes

Program Settings