Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p05720 Brassica napus HOM05D000272 ORTHO05D037977 2.0e-98 362.5 182 100.0
BolC1t00552H Brassica oleracea HOM05D000272 ORTHO05D000164 1.5e-61 240.0 190 74.7
A01p05240 Brassica napus HOM05D000272 ORTHO05D000164 7.5e-42 174.5 231 52.4
BolC1t00549H Brassica oleracea HOM05D000272 ORTHO05D000164 9.8e-42 174.1 198 57.1
C01p05690 Brassica napus HOM05D000272 ORTHO05D000164 6.4e-41 171.4 198 56.6
BraA01t00503Z Brassica rapa HOM05D000272 ORTHO05D000164 5.4e-40 168.3 198 56.1
A01p05200 Brassica napus HOM05D000272 ORTHO05D000164 2.1e-39 166.4 198 55.6
Sp7g30750 Schrenkiella parvula HOM05D000272 ORTHO05D000164 2.0e-34 149.8 194 54.1
C07p59450 Brassica napus HOM05D000272 ORTHO05D000164 4.4e-34 148.7 195 51.3
BolC7t46388H Brassica oleracea HOM05D000272 ORTHO05D000164 4.4e-34 148.7 195 51.3
Thhalv10025083m.g Eutrema salsugineum HOM05D000272 ORTHO05D000164 2.2e-33 146.4 194 50.5
BcaNung02149 Brassica carinata HOM05D000272 ORTHO05D000164 4.9e-33 145.2 195 50.8
BraA03t15211Z Brassica rapa HOM05D000272 ORTHO05D000164 4.9e-33 145.2 195 51.8
A03p61730 Brassica napus HOM05D000272 ORTHO05D000164 1.9e-32 143.3 195 51.3
AL7G18710 Arabidopsis lyrata HOM05D000272 ORTHO05D000164 3.5e-31 139.0 194 50.0
Carub.0007s0750 Capsella rubella HOM05D000272 ORTHO05D000164 6.0e-31 138.3 194 50.0
AT4G32980 Arabidopsis thaliana HOM05D000272 ORTHO05D000164 6.6e-30 134.8 192 47.9
BcaC09g52096 Brassica carinata HOM05D000272 ORTHO05D000164 2.8e-28 129.4 182 49.5
CARHR240990 Cardamine hirsuta HOM05D000272 ORTHO05D000164 6.2e-28 128.3 194 47.4
Dinv27977 Davidia involucrata HOM05D000272 ORTHO05D000164 4.3e-21 105.5 159 44.0
CiPaw.15G040000 Carya illinoinensis HOM05D000272 ORTHO05D000164 1.3e-20 104.0 161 44.1
QL02p001377 Quercus lobata HOM05D000272 ORTHO05D000164 6.2e-20 101.7 160 43.8
Glyma.04G050800 Glycine max HOM05D000272 ORTHO05D000164 8.1e-20 101.3 187 42.2
THA.LOC104803732 Tarenaya hassleriana HOM05D000272 ORTHO05D000164 1.4e-19 100.5 171 44.4
VMungo1309G2321 Vigna mungo HOM05D000272 ORTHO05D000164 1.8e-19 100.1 175 43.4
BolC1t00574H Brassica oleracea HOM05D000272 ORTHO05D000164 2.4e-19 99.8 161 46.0
Manes.16G079300 Manihot esculenta HOM05D000272 ORTHO05D000164 2.4e-19 99.8 160 44.4
Nitab4.5_0004160g0020 Nicotiana tabacum HOM05D000272 ORTHO05D000164 3.1e-19 99.4 156 42.3
Phvul.009G077100 Phaseolus vulgaris HOM05D000272 ORTHO05D000164 3.1e-19 99.4 187 41.7
Aa31LG5G9720 Aethionema arabicum HOM05D000272 ORTHO05D000164 5.3e-19 98.6 159 44.0
PGSC0003DMG400029946 Solanum tuberosum HOM05D000272 ORTHO05D000164 1.5e-18 97.1 161 42.9
CiPaw.16G029100 Carya illinoinensis HOM05D000272 ORTHO05D000164 2.0e-18 96.7 160 42.5
COL.COLO4_21044 Corchorus olitorius HOM05D000272 ORTHO05D000164 2.0e-18 96.7 159 45.3
Ca_13174_v3 Cicer arietinum L. HOM05D000272 ORTHO05D000164 2.6e-18 96.3 174 40.2
Medtr1g016490 Medicago truncatula HOM05D000272 ORTHO05D000164 2.6e-18 96.3 173 39.9
TWI34G1359 Tripterygium wilfordii HOM05D000272 ORTHO05D000164 2.6e-18 96.3 161 42.2
Eucgr.C03024 Eucalyptus grandis HOM05D000272 ORTHO05D000164 3.4e-18 95.9 173 40.5
Psat6g019760 Pisum sativum HOM05D000272 ORTHO05D000164 3.4e-18 95.9 173 39.9
Thecc.09G052700 Theobroma cacao HOM05D000272 ORTHO05D000164 3.4e-18 95.9 167 40.1
GSVIVG01035361001 Vitis vinifera HOM05D000272 ORTHO05D000164 4.5e-18 95.5 164 44.5
Actinidia30307 Actinidia chinensis HOM05D000272 ORTHO05D000164 5.8e-18 95.1 160 43.8
CSS0026906 Camellia sinensis var. sinensis HOM05D000272 ORTHO05D000164 5.8e-18 95.1 161 42.2
Lj5g0011394 Lotus japonicus HOM05D000272 ORTHO05D000164 5.8e-18 95.1 173 41.0
Potri.018G054700 Populus trichocarpa HOM05D000272 ORTHO05D000164 5.8e-18 95.1 177 39.5
MSTRG.14049 Avicennia marina HOM05D000272 ORTHO05D000164 7.6e-18 94.7 175 39.4
PGR044G0114 Punica granatum HOM05D000272 ORTHO05D000164 7.6e-18 94.7 166 42.8
Sopen08g019010 Solanum pennellii HOM05D000272 ORTHO05D000164 7.6e-18 94.7 161 42.2
Glyma.06G051600 Glycine max HOM05D000272 ORTHO05D000164 9.9e-18 94.4 187 41.2
Gohir.D07G022500 Gossypium hirsutum HOM05D000272 ORTHO05D000164 9.9e-18 94.4 155 42.6
Solyc08g065420.3 Solanum lycopersicum HOM05D000272 ORTHO05D000164 9.9e-18 94.4 162 42.0
Manes.03G047300 Manihot esculenta HOM05D000272 ORTHO05D000164 1.3e-17 94.0 170 41.8
TWI32G1306 Tripterygium wilfordii HOM05D000272 ORTHO05D000164 1.3e-17 94.0 161 42.2
vmacro00150 Vaccinium macrocarpon HOM05D000272 ORTHO05D000164 1.3e-17 94.0 175 40.0
CSS0006877 Camellia sinensis var. sinensis HOM05D000272 ORTHO05D000164 1.7e-17 93.6 164 40.9
Dinv23432 Davidia involucrata HOM05D000272 ORTHO05D000164 1.7e-17 93.6 160 41.9
Duzib187G0615 Durio zibethinus HOM05D000272 ORTHO05D000164 1.7e-17 93.6 159 43.4
Gohir.A07G022116 Gossypium hirsutum HOM05D000272 ORTHO05D000164 1.7e-17 93.6 162 42.0
Nitab4.5_0001584g0080 Nicotiana tabacum HOM05D000272 ORTHO05D000164 1.7e-17 93.6 161 42.2
Potri.006G230700 Populus trichocarpa HOM05D000272 ORTHO05D000164 1.7e-17 93.6 166 41.6
Gorai.001G023100 Gossypium raimondii HOM05D000272 ORTHO05D000164 2.9e-17 92.8 162 42.0
Hma1.2p1_0482F.1_g162600 Hydrangea macrophylla HOM05D000272 ORTHO05D000164 2.9e-17 92.8 161 41.0
Cc08_g10440 Coffea canephora HOM05D000272 ORTHO05D000164 3.8e-17 92.4 163 41.1
Peaxi162Scf00136g00045 Petunia axillaris HOM05D000272 ORTHO05D000164 3.8e-17 92.4 160 40.0
CAN.G117.4 Capsicum annuum HOM05D000272 ORTHO05D000164 4.9e-17 92.0 161 41.6
Duzib150G1201 Durio zibethinus HOM05D000272 ORTHO05D000164 6.4e-17 91.7 167 38.9
Lj7A277T21 Lonicera japonica HOM05D000272 ORTHO05D000164 6.4e-17 91.7 161 41.0
Cpa.g.sc78.15 Carica papaya HOM05D000272 ORTHO05D000164 8.4e-17 91.3 153 42.5
Sabra06G0178900 Salix brachista HOM05D000272 ORTHO05D000164 8.4e-17 91.3 166 40.4
Duzib168G0983 Durio zibethinus HOM05D000272 ORTHO05D000164 1.1e-16 90.9 159 43.4
Lj1g0017549 Lotus japonicus HOM05D000272 ORTHO05D000164 1.1e-16 90.9 186 39.8
Ciclev10010212m.g Citrus clementina HOM05D000272 ORTHO05D000164 1.4e-16 90.5 53 81.1
Oeu018649.1 Olea europaea HOM05D000272 ORTHO05D000164 1.4e-16 90.5 159 40.3
Prupe.1G413700 Prunus persica HOM05D000272 ORTHO05D000164 1.4e-16 90.5 166 41.6
SalBow4G0202 Salvia bowleyana HOM05D000272 ORTHO05D000164 1.4e-16 90.5 170 38.8
Actinidia14708 Actinidia chinensis HOM05D000272 ORTHO05D000164 1.9e-16 90.1 163 41.1
Glyma.17G230000 Glycine max HOM05D000272 ORTHO05D000164 1.9e-16 90.1 160 41.9
CANSAT25G2775 Cannabis sativa HOM05D000272 ORTHO05D000164 2.4e-16 89.7 158 38.6
Phvul.001G034200 Phaseolus vulgaris HOM05D000272 ORTHO05D000164 2.4e-16 89.7 160 41.2
MSTRG.11664 Avicennia marina HOM05D000272 ORTHO05D000164 3.2e-16 89.4 159 40.3
Lalb_Chr11g0063111 Lupinus albus HOM05D000272 ORTHO05D000164 4.2e-16 89.0 161 41.0
Sabra18G0049400 Salix brachista HOM05D000272 ORTHO05D000164 4.2e-16 89.0 51 82.4
DCAR_004433 Daucus carota HOM05D000272 ORTHO05D000164 7.1e-16 88.2 161 37.9
HanXRQChr06g0173841 Helianthus annuus HOM05D000272 ORTHO05D000164 9.3e-16 87.8 161 38.5
AUR62022061 Chenopodium quinoa HOM05D000272 ORTHO05D000164 1.6e-15 87.0 178 36.5
arahy.Tifrunner.gnm1.ann1.4HW5AH Arachis hypogaea HOM05D000272 ORTHO05D000164 2.1e-15 86.7 167 39.5
arahy.Tifrunner.gnm1.ann1.WUKV82 Arachis hypogaea HOM05D000272 ORTHO05D000164 2.1e-15 86.7 167 39.5
MD08G1043600 Malus domestica HOM05D000272 ORTHO05D000164 2.1e-15 86.7 197 36.0
Oeu047117.2 Olea europaea HOM05D000272 ORTHO05D000164 4.6e-15 85.5 158 39.2
TAR383G0776 Trochodendron aralioides HOM05D000272 ORTHO05D000164 4.6e-15 85.5 164 39.0
Aqoxy7G01252 Aquilegia oxysepala HOM05D001205 ORTHO05D001087 6.0e-15 85.1 176 37.5
Ah.11g044710 Amaranthus hybridus HOM05D000272 ORTHO05D000164 7.9e-15 84.7 50 80.0
TAR626G1020 Trochodendron aralioides HOM05D000272 ORTHO05D000164 7.9e-15 84.7 168 40.5
VMungo0647G0054 Vigna mungo HOM05D000272 ORTHO05D000164 7.9e-15 84.7 160 39.4
EL10Ac2g03900 Beta vulgaris HOM05D000272 ORTHO05D000164 1.0e-14 84.3 50 80.0
AUR62009161 Chenopodium quinoa HOM05D000272 ORTHO05D000164 1.0e-14 84.3 50 80.0
AUR62044382 Chenopodium quinoa HOM05D000272 ORTHO05D000164 1.0e-14 84.3 50 80.0
HanXRQChr17g0538451 Helianthus annuus HOM05D000272 ORTHO05D000164 1.0e-14 84.3 157 38.9
Nn8g38910 Nelumbo nucifera HOM05D000272 ORTHO05D000164 1.0e-14 84.3 180 40.0
unitig_0.g2561 Utricularia gibba HOM05D000272 ORTHO05D000164 1.0e-14 84.3 159 39.6
FAN27G1277 Fragaria x ananassa HOM05D000272 ORTHO05D000164 1.3e-14 84.0 160 39.4
MD15G1061000 Malus domestica HOM05D000272 ORTHO05D000164 1.3e-14 84.0 178 37.6
RcHm_v2.0_Chr6g0310681 Rosa chinensis HOM05D000272 ORTHO05D000164 1.3e-14 84.0 159 39.0
SalBow1G5080 Salvia bowleyana HOM05D000272 ORTHO05D000164 1.3e-14 84.0 160 37.5
TAR624G0764 Trochodendron aralioides HOM05D000272 ORTHO05D000164 1.3e-14 84.0 50 80.0
FAN15G3216 Fragaria x ananassa HOM05D000272 ORTHO05D000164 1.8e-14 83.6 159 37.7
Lalb_Chr23g0267751 Lupinus albus HOM05D000272 ORTHO05D000164 1.8e-14 83.6 161 39.8
SGA_v2.0_scaffold163G38035 Striga asiatica HOM05D000272 ORTHO05D000164 1.8e-14 83.6 145 36.6
unitig_748.g7521 Utricularia gibba HOM05D000272 ORTHO05D000164 1.8e-14 83.6 59 69.5
DCAR_007725 Daucus carota HOM05D000272 ORTHO05D000164 2.3e-14 83.2 160 39.4
A01p05260 Brassica napus HOM05D000272 ORTHO05D000164 3.0e-14 82.8 48 85.4
FAN20G0304 Fragaria x ananassa HOM05D000272 ORTHO05D000164 3.9e-14 82.4 159 37.7
Nn6g35429 Nelumbo nucifera HOM05D000272 ORTHO05D000164 3.9e-14 82.4 175 37.7
FvH4_2g32060 Fragaria vesca HOM05D000272 ORTHO05D000164 5.1e-14 82.0 159 38.4
Migut.A00142 Erythranthe guttata HOM05D000272 ORTHO05D000164 1.5e-13 80.5 51 74.5
CsaV3_2G025630 Cucumis sativus L. HOM05D000272 ORTHO05D000164 2.5e-13 79.7 162 37.0
Sc23g0005580 Simmondsia chinensis HOM05D000272 ORTHO05D000164 2.5e-13 79.7 62 59.7
PSO210G7454 Papaver somniferum HOM05D000272 ORTHO05D000164 3.3e-13 79.3 167 35.3
Lsat_1_v5_gn_3_24340 Lactuca sativa HOM05D000272 ORTHO05D000164 7.4e-13 78.2 53 67.9
Hund19465 Selenicereus undatus HOM05D000272 ORTHO05D000164 7.4e-13 78.2 50 70.0
TPR.G13099 Trifolium pratense HOM05D000272 ORTHO05D000164 9.6e-13 77.8 51 72.5
ClCG08G016970 Citrullus lanatus HOM05D000272 ORTHO05D000164 1.3e-12 77.4 50 70.0
FAN24G1584 Fragaria x ananassa HOM05D000577 ORTHO05D000164 2.1e-12 76.6 53 69.8
SGA_v2.0_scaffold169G38685 Striga asiatica HOM05D000272 ORTHO05D000164 2.1e-12 76.6 170 35.3
ECA246G4237 Erigeron canadensis HOM05D000272 ORTHO05D000164 2.8e-12 76.3 52 65.4
MELO3C010759.2 Cucumis melo HOM05D000272 ORTHO05D000164 4.8e-12 75.5 63 60.3
MELO3C030120.2 Cucumis melo HOM05D000272 ORTHO05D000164 4.8e-12 75.5 63 60.3
Rhsim11G0044800 Rhododendron simsii HOM05D000272 ORTHO05D000164 8.1e-12 74.7 53 64.2
MBI01_g02262_MAGBIO Magnolia biondii HOM05D000272 ORTHO05D000164 1.8e-11 73.6 63 58.7
Sed0016305 Sechium edule HOM05D000272 ORTHO05D000164 3.1e-11 72.8 50 62.0
MBI04_g11712_MAGBIO Magnolia biondii HOM05D000272 ORTHO05D000164 9.0e-11 71.2 63 54.0
PSO063G0664 Papaver somniferum HOM05D000272 ORTHO05D000164 9.0e-11 71.2 54 61.1
PSO832G0977 Papaver somniferum HOM05D000272 ORTHO05D000164 1.5e-10 70.5 54 61.1
Actinidia01195 Actinidia chinensis HOM05D000272 ORTHO05D037977 1.0e-06 57.8 50 50.0


User provided reference genes

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