Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p00850 Brassica napus HOM05D006521 ORTHO05D008087 2.4e-184 648.7 324 100.0
BolC3t20094H Brassica oleracea HOM05D006521 ORTHO05D008087 3.2e-120 435.6 385 65.2
A08p23330 Brassica napus HOM05D006521 ORTHO05D008087 1.2e-119 433.7 380 63.9
BraA08t34287Z Brassica rapa HOM05D006521 ORTHO05D008087 1.2e-119 433.7 380 63.9
C03p78340 Brassica napus HOM05D006521 ORTHO05D008087 6.1e-119 431.4 381 64.6
AL7G12040 Arabidopsis lyrata HOM05D006521 ORTHO05D008087 1.8e-118 429.9 393 62.6
Thhalv10025314m.g Eutrema salsugineum HOM05D006521 ORTHO05D008087 3.0e-118 429.1 378 63.2
Carub.0007s0173 Capsella rubella HOM05D006521 ORTHO05D008087 6.7e-118 427.9 372 63.4
AT4G39820 Arabidopsis thaliana HOM05D006521 ORTHO05D008087 8.8e-118 427.6 390 62.1
CARHR246880 Cardamine hirsuta HOM05D006521 ORTHO05D008087 1.7e-116 423.3 392 61.7
Sp7g36070 Schrenkiella parvula HOM05D006521 ORTHO05D008087 6.3e-116 421.4 400 60.0
Aa31LG6G15450 Aethionema arabicum HOM05D006521 ORTHO05D008087 5.2e-110 401.7 385 59.2
THA.LOC104824871 Tarenaya hassleriana HOM05D006521 ORTHO05D008087 2.5e-104 382.9 393 55.7
THA.LOC104807700 Tarenaya hassleriana HOM05D006521 ORTHO05D008087 9.4e-104 380.9 382 57.1
BcaNung05326 Brassica carinata HOM05D006521 ORTHO05D008087 6.6e-89 331.6 334 59.3
Duzib147G0857 Durio zibethinus HOM05D006521 ORTHO05D008087 2.8e-87 326.2 364 50.0
Lalb_Chr11g0075241 Lupinus albus HOM05D006521 ORTHO05D008087 8.0e-87 324.7 352 50.0
Glyma.18G019200 Glycine max HOM05D006521 ORTHO05D008087 1.0e-86 324.3 356 51.1
Phvul.001G250400 Phaseolus vulgaris HOM05D006521 ORTHO05D008087 3.1e-86 322.8 357 50.7
Ca_16545_v3 Cicer arietinum L. HOM05D006521 ORTHO05D008087 4.0e-86 322.4 362 50.0
Thecc.01G106200 Theobroma cacao HOM05D006521 ORTHO05D008087 6.8e-86 321.6 364 49.5
Glyma.11G238100 Glycine max HOM05D006521 ORTHO05D008087 1.5e-85 320.5 357 50.4
Duzib264G0874 Durio zibethinus HOM05D006521 ORTHO05D008087 2.6e-85 319.7 356 50.0
arahy.Tifrunner.gnm1.ann1.2NAN3W Arachis hypogaea HOM05D006521 ORTHO05D008087 3.4e-85 319.3 370 48.6
arahy.Tifrunner.gnm1.ann1.IK9JFE Arachis hypogaea HOM05D006521 ORTHO05D008087 3.4e-85 319.3 370 48.6
Medtr3g087760 Medicago truncatula HOM05D006521 ORTHO05D008087 3.4e-85 319.3 357 50.1
Atru.chr4.229 Acer truncatum HOM05D006521 ORTHO05D008087 4.4e-85 318.9 372 48.7
Cpa.g.sc20.228 Carica papaya HOM05D006521 ORTHO05D008087 4.4e-85 318.9 382 47.9
FAN28G0591 Fragaria x ananassa HOM05D006521 ORTHO05D008087 4.4e-85 318.9 354 50.6
Gorai.007G061700 Gossypium raimondii HOM05D006521 ORTHO05D008087 4.4e-85 318.9 357 49.6
Gorai.008G103700 Gossypium raimondii HOM05D006521 ORTHO05D008087 4.4e-85 318.9 364 50.3
Lj6g0010661 Lotus japonicus HOM05D006521 ORTHO05D008087 1.3e-84 317.4 362 49.4
VMungo1383G3636 Vigna mungo HOM05D006521 ORTHO05D008087 1.7e-84 317.0 364 50.3
Prupe.3G102100 Prunus persica HOM05D006521 ORTHO05D008087 1.4e-83 313.9 351 49.6
MELO3C007776.2 Cucumis melo HOM05D006521 ORTHO05D008087 3.2e-83 312.8 358 49.2
FAN19G2752 Fragaria x ananassa HOM05D006521 ORTHO05D008087 3.2e-83 312.8 354 50.3
CANSAT01G1058 Cannabis sativa HOM05D006521 ORTHO05D008087 4.1e-83 312.4 384 47.7
TAR376G0467 Trochodendron aralioides HOM05D006521 ORTHO05D008087 5.4e-83 312.0 358 49.4
FvH4_1g21530 Fragaria vesca HOM05D006521 ORTHO05D008087 7.0e-83 311.6 354 50.3
Sed0002886 Sechium edule HOM05D006521 ORTHO05D008087 7.0e-83 311.6 363 49.0
ClCG01G018970 Citrullus lanatus HOM05D006521 ORTHO05D008087 1.6e-82 310.5 358 48.9
FAN23G2501 Fragaria x ananassa HOM05D006521 ORTHO05D008087 2.0e-82 310.1 354 50.0
QL06p050323 Quercus lobata HOM05D006521 ORTHO05D008087 2.0e-82 310.1 354 49.7
Dinv00937 Davidia involucrata HOM05D006521 ORTHO05D008087 3.5e-82 309.3 356 49.2
RcHm_v2.0_Chr2g0115391 Rosa chinensis HOM05D006521 ORTHO05D008087 3.5e-82 309.3 363 47.9
CsaV3_6G045650 Cucumis sativus L. HOM05D006521 ORTHO05D008087 4.6e-82 308.9 358 48.9
Manes.12G138400 Manihot esculenta HOM05D006521 ORTHO05D008087 4.6e-82 308.9 364 48.4
Hma1.2p1_0011F.1_g007170 Hydrangea macrophylla HOM05D006521 ORTHO05D008087 1.0e-81 307.8 352 50.3
Dinv16313 Davidia involucrata HOM05D006521 ORTHO05D008087 1.3e-81 307.4 356 48.9
A01p00740 Brassica napus HOM05D006521 ORTHO05D008087 1.7e-81 307.0 298 61.7
Ciclev10025891m.g Citrus clementina HOM05D006521 ORTHO05D008087 3.9e-81 305.8 355 49.0
Psat5g088760 Pisum sativum HOM05D006521 ORTHO05D008087 1.5e-80 303.9 341 49.0
Eucgr.I00394 Eucalyptus grandis HOM05D006521 ORTHO05D008087 3.6e-79 299.3 356 47.2
TWI74G1358 Tripterygium wilfordii HOM05D006521 ORTHO05D008087 6.2e-79 298.5 353 47.3
PSO447G0171 Papaver somniferum HOM05D006521 ORTHO05D008087 2.3e-78 296.6 356 47.8
PGR004G2411 Punica granatum HOM05D006521 ORTHO05D008087 3.1e-78 296.2 362 48.1
SGA_v2.0_scaffold2G01323 Striga asiatica HOM05D006521 ORTHO05D008087 4.0e-78 295.8 357 47.1
Potri.005G079300 Populus trichocarpa HOM05D006521 ORTHO05D008087 6.8e-78 295.0 350 48.6
Lsat_1_v5_gn_4_21220 Lactuca sativa HOM05D006521 ORTHO05D008087 1.5e-77 293.9 358 48.3
Sed0013283 Sechium edule HOM05D006521 ORTHO05D008087 2.6e-77 293.1 360 46.1
TPR.G22881 Trifolium pratense HOM05D006521 ORTHO05D008087 7.5e-77 291.6 371 45.8
PSO210G2459 Papaver somniferum HOM05D006521 ORTHO05D008087 9.8e-77 291.2 356 47.2
TWI77G0511 Tripterygium wilfordii HOM05D006521 ORTHO05D008087 2.2e-76 290.0 367 45.5
SalBow3G0008 Salvia bowleyana HOM05D006521 ORTHO05D008087 6.4e-76 288.5 368 45.1
Aqoxy5G01962 Aquilegia oxysepala HOM05D006521 ORTHO05D008087 1.1e-75 287.7 358 46.4
ECA234G2647 Erigeron canadensis HOM05D006521 ORTHO05D008087 1.4e-75 287.3 364 46.4
HanXRQChr16g0527921 Helianthus annuus HOM05D006521 ORTHO05D008087 1.4e-75 287.3 352 47.2
Rhsim10G0157900 Rhododendron simsii HOM05D006521 ORTHO05D008087 2.4e-75 286.6 360 47.2
Sabra05G0065200 Salix brachista HOM05D006521 ORTHO05D004292 1.2e-74 284.3 356 46.6
Nitab4.5_0000715g0180 Nicotiana tabacum HOM05D006521 ORTHO05D008087 1.6e-74 283.9 357 46.5
PGSC0003DMG400021832 Solanum tuberosum HOM05D006521 ORTHO05D008087 1.6e-74 283.9 371 45.8
CAN.G1494.2 Capsicum annuum HOM05D006521 ORTHO05D008087 2.1e-74 283.5 357 47.6
AUR62002034 Chenopodium quinoa HOM05D006521 ORTHO05D008087 6.0e-74 282.0 334 46.1
AUR62003763 Chenopodium quinoa HOM05D006521 ORTHO05D008087 6.0e-74 282.0 334 46.1
Sopen05g030360 Solanum pennellii HOM05D006521 ORTHO05D008087 6.0e-74 282.0 352 46.9
Solyc05g051840.1 Solanum lycopersicum HOM05D006521 ORTHO05D008087 1.3e-73 280.8 378 45.2
Sc16g0005450 Simmondsia chinensis HOM05D006521 ORTHO05D008087 3.9e-73 279.3 344 46.2
Cc07_g15580 Coffea canephora HOM05D006521 ORTHO05D008087 8.6e-73 278.1 348 47.4
Migut.H02388 Erythranthe guttata HOM05D006521 ORTHO05D008087 1.5e-72 277.3 359 43.7
Lsat_1_v5_gn_2_67800 Lactuca sativa HOM05D006521 ORTHO05D008087 1.9e-72 276.9 338 46.2
Ah.02g122760 Amaranthus hybridus HOM05D006521 ORTHO05D008087 2.5e-72 276.6 353 45.0
Oeu053565.1 Olea europaea HOM05D006521 ORTHO05D008087 5.6e-72 275.4 366 44.0
Ah.02g120360 Amaranthus hybridus HOM05D006521 ORTHO05D008087 2.1e-71 273.5 351 44.2
SHI11594 Sapria himalayana HOM05D006521 ORTHO05D008087 1.4e-70 270.8 378 43.4
DCAR_011503 Daucus carota HOM05D006521 ORTHO05D008087 4.0e-70 269.2 357 44.5
HanXRQChr15g0471711 Helianthus annuus HOM05D006521 ORTHO05D008087 5.2e-70 268.9 337 46.0
HPP92_016137 Vanilla planifolia HOM05D006521 ORTHO05D008087 1.5e-69 267.3 371 44.7
COL.COLO4_09911 Corchorus olitorius HOM05D006521 ORTHO05D008087 1.3e-68 264.2 277 54.2
Hund13498 Selenicereus undatus HOM05D006521 ORTHO05D008087 2.2e-68 263.5 337 43.6
Atru.chr1.3715 Acer truncatum HOM05D006521 ORTHO05D008087 9.2e-67 258.1 338 46.4
Nitab4.5_0005597g0010 Nicotiana tabacum HOM05D006521 ORTHO05D008087 2.7e-66 256.5 305 48.9
Haze_24978 Corylus avellana HOM05D006521 ORTHO05D008087 4.6e-66 255.8 351 42.5
CiPaw.03G138700 Carya illinoinensis HOM05D006521 ORTHO05D008087 6.0e-66 255.4 352 42.6
unitig_32.g11814 Utricularia gibba HOM05D006521 ORTHO05D008087 1.1e-62 244.6 350 40.9
Lj4A883T21 Lonicera japonica HOM05D006521 ORTHO05D008087 4.4e-61 239.2 347 43.8
Lj4A881T25 Lonicera japonica HOM05D006521 ORTHO05D008087 4.2e-59 232.6 291 48.8
Cfa002704 Carpinus fangiana HOM05D006521 ORTHO05D008087 3.5e-58 229.6 351 39.6
BcaNung00904 Brassica carinata HOM05D006521 ORTHO05D008087 4.6e-58 229.2 126 93.7
ATR0789G153 Amborella trichopoda HOM05D006521 ORTHO05D008087 1.9e-56 223.8 486 32.9
CDE10G1235 Ceratophyllum demersum HOM05D006521 ORTHO05D008087 2.1e-55 220.3 313 41.9
Nn1g05268 Nelumbo nucifera HOM05D006521 ORTHO05D008087 1.2e-53 214.5 309 41.7
Os02g0550400 Oryza sativa ssp. japonica HOM05D006521 ORTHO05D008087 2.6e-53 213.4 309 42.4
Atru.chr1.3697 Acer truncatum HOM05D006521 ORTHO05D008087 5.6e-48 195.7 139 69.1
Actinidia36602 Actinidia chinensis HOM05D006521 ORTHO05D008087 7.3e-48 195.3 283 42.8
ECA238G2228 Erigeron canadensis HOM05D006521 ORTHO05D008087 9.6e-48 194.9 136 68.4
ECA238G1388 Erigeron canadensis HOM05D001700 ORTHO05D002131 2.1e-47 193.7 136 67.6
EL10Ac6g15070 Beta vulgaris HOM05D006521 ORTHO05D008087 2.4e-46 190.3 116 76.7
SEGI_26188 Sequoiadendron giganteum HOM05D006521 ORTHO05D008087 1.2e-45 188.0 205 45.9
AagrBONN_evm.TU.Sc2ySwM_368.767 Anthoceros agrestis HOM05D006521 ORTHO05D008087 2.4e-43 180.3 404 30.2
Mapoly0165s0018 Marchantia polymorpha HOM05D006521 ORTHO05D008087 1.3e-36 157.9 198 41.4
HanXRQChr10g0288811 Helianthus annuus HOM05D006521 ORTHO05D008087 8.4e-36 155.2 105 73.3
SMO353G0213 Selaginella moellendorffii HOM05D006521 ORTHO05D008087 9.3e-35 151.8 210 41.0
Pp3c22_3810 Physcomitrium patens HOM05D006521 ORTHO05D008087 3.5e-34 149.8 402 27.6
Pp3c19_5060 Physcomitrium patens HOM05D006521 ORTHO05D008087 3.0e-33 146.7 401 27.2
Peaxi162Scf00295g00033 Petunia axillaris HOM05D006521 ORTHO05D008087 5.1e-33 146.0 180 46.1
Pp3c10_9400 Physcomitrium patens HOM05D006521 ORTHO05D008087 3.8e-28 129.8 377 24.4
CBR_g34484 Chara braunii HOM05D006521 ORTHO05D008087 2.1e-26 124.0 248 30.6
Pp3c14_5890 Physcomitrium patens HOM05D006521 ORTHO05D008087 2.1e-26 124.0 377 23.6
TAR636G0192 Trochodendron aralioides HOM05D006521 ORTHO05D008087 1.4e-11 74.7 126 38.9
PRCOL_00001846 Prasinoderma coloniale HOM05D006521 ORTHO05D008087 2.7e-10 70.5 98 42.9
Atru.chr1.3698 Acer truncatum HOM05D006521 ORTHO05D008087 3.6e-10 70.1 76 50.0
FAN13G3020 Fragaria x ananassa HOM05D005489 ORTHO05D006629 3.0e-09 67.0 62 50.0


User provided reference genes

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